PDB Chemical Component A3P

Ideal Model

Chemical Description

Name ADENOSINE-3'-5'-DIPHOSPHATE
Formula C10 H15 N5 O10 P2
Formal charge 0
Molecular weight 427.201 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 42
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms O3P
Bond count 44
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) adenosine 3',5'-bis(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(phosphonooxymethyl)oxolan-3-yl] dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H]3O
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]3O
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)OP(=O)(O)O)O)N
InChI descriptor InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7(25-27(20,21)22)4(24-10)1-23-26(17,18)19/h2-4,6-7,10,16H,1H2,(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
InChIKey descriptor WHTCPDAXWFLDIH-KQYNXXCUSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1AQU
Processing site RCSB