PDB Chemical Component A3M

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A3M

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.604 1.543
C1 C5 1.594 1.551
C1 HC11 1.115 1.090
C1 HC12 1.115 1.089
C2 N3 1.473 1.470
C2 HC21 1.115 1.090
C2 HC22 1.116 1.089
N3 C4 1.482 1.473
N3 C14 1.462 1.347
C4 C5 1.549 1.551
C4 HC41 1.115 1.090
C4 HC42 1.115 1.090
C5 HC51 1.114 1.090
C5 HC52 1.114 1.090
C14 C15 1.470 1.507
C14 O18 1.375 1.212
C15 C16 1.502 1.529
C15 N19 1.500 1.468
C15 H15 1.115 1.089
C16 C17 1.471 1.530
C16 C26 1.692 1.530
C16 H16 1.115 1.090
C17 H171 1.115 1.090
C17 H172 1.115 1.089
C17 H173 1.115 1.090
N19 H191 1.020 1.009
N19 H192 1.020 1.010
C26 H261 1.115 1.090
C26 H262 1.115 1.090
C26 H263 1.116 1.089

Bond Angles for A3M

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C5 103.2 102.9
C2 C1 HC11 114.6 110.8
C2 C1 HC12 114.6 110.8
C1 C2 N3 104.8 107.3
C1 C2 HC21 114.0 109.9
C1 C2 HC22 114.0 109.8
C5 C1 HC11 114.6 110.7
C5 C1 HC12 114.6 110.7
C1 C5 C4 99.4 101.5
C1 C5 HC51 116.1 111.0
C1 C5 HC52 116.1 111.1
HC11 C1 HC12 95.9 110.7
N3 C2 HC21 114.0 109.9
N3 C2 HC22 114.0 109.9
C2 N3 C4 104.6 108.7
C2 N3 C14 113.6 125.6
HC21 C2 HC22 96.5 110.0
C4 N3 C14 116.9 125.7
N3 C4 C5 101.5 104.7
N3 C4 HC41 115.2 110.7
N3 C4 HC42 115.2 110.2
N3 C14 C15 127.0 120.0
N3 C14 O18 117.4 120.0
C5 C4 HC41 115.3 110.4
C5 C4 HC42 115.3 110.4
C4 C5 HC51 116.1 111.2
C4 C5 HC52 116.0 110.9
HC41 C4 HC42 95.2 110.4
HC51 C5 HC52 94.4 110.9
C15 C14 O18 115.6 120.0
C14 C15 C16 118.4 109.5
C14 C15 N19 111.3 109.5
C14 C15 H15 100.9 109.5
C16 C15 N19 107.1 109.5
C16 C15 H15 105.6 109.4
C15 C16 C17 114.9 109.5
C15 C16 C26 110.3 109.5
C15 C16 H16 103.8 109.5
N19 C15 H15 113.6 109.5
C15 N19 H191 111.3 106.7
C15 N19 H192 111.6 106.7
C17 C16 C26 105.1 109.4
C17 C16 H16 109.2 109.5
C16 C17 H171 114.9 109.5
C16 C17 H172 110.2 109.4
C16 C17 H173 110.2 109.4
C26 C16 H16 113.8 109.4
C16 C26 H261 110.3 109.4
C16 C26 H262 111.9 109.4
C16 C26 H263 111.9 109.5
H171 C17 H172 110.3 109.5
H171 C17 H173 110.2 109.5
H172 C17 H173 100.1 109.5
H191 N19 H192 111.5 106.7
H261 C26 H262 111.9 109.5
H261 C26 H263 111.8 109.5
H262 C26 H263 98.5 109.4

Torsion Angles for A3M

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 C1 C2 HC11 234.7 241.7
C5 C1 C2 HC12 125.3 118.4
C2 C1 C5 C4 28.2 324.3
C2 C1 C5 HC51 153.4 82.6
C2 C1 C5 HC52 263.0 206.4
HC11 C1 C2 HC12 250.6 236.7
N3 C2 C1 HC21 234.7 119.4
N3 C2 C1 HC22 125.3 240.5
C1 C2 N3 C4 328.8 1.3
C1 C2 N3 C14 200.2 181.0
HC21 C2 C1 HC22 250.5 121.1
C2 C1 C5 HC11 125.3 118.4
C2 C1 C5 HC12 234.7 241.6
C5 C1 C2 N3 0.6 22.2
C5 C1 C2 HC21 125.9 262.8
C5 C1 C2 HC22 235.3 141.6
HC11 C1 C5 HC12 109.5 123.2
N3 C4 C5 C1 312.1 37.3
C1 C5 C4 HC41 186.9 278.2
C1 C5 C4 HC42 77.3 155.9
C4 C5 C1 HC51 234.8 241.8
C4 C5 C1 HC52 125.2 117.9
HC51 C5 C1 HC52 250.5 236.2
C2 C1 HC11 C5 241.0 246.5
C2 C1 HC11 HC12 120.5 123.3
HC11 C1 C2 N3 125.8 140.5
HC11 C1 C2 HC21 251.1 21.1
HC11 C1 C2 HC22 0.6 260.0
C5 C1 HC11 HC12 239.5 236.8
HC11 C1 C5 C4 262.9 206.0
HC11 C1 C5 HC51 28.2 324.2
HC11 C1 C5 HC52 137.7 88.0
C2 C1 HC12 C5 119.0 113.5
C2 C1 HC12 HC11 239.5 236.7
HC12 C1 C2 N3 235.3 263.8
HC12 C1 C2 HC21 0.6 144.4
HC12 C1 C2 HC22 110.0 23.3
C5 C1 HC12 HC11 120.5 123.1
HC12 C1 C5 C4 153.4 82.8
HC12 C1 C5 HC51 278.7 201.0
HC12 C1 C5 HC52 28.2 324.8
N3 C2 C1 C5 0.6 22.2
N3 C2 C1 HC11 125.8 140.5
N3 C2 C1 HC12 235.3 263.8
C1 C2 N3 HC21 125.3 240.6
C1 C2 N3 HC22 234.7 119.4
HC21 C2 N3 HC22 109.4 238.8
C4 N3 C2 C14 128.6 180.3
C2 N3 C4 C5 50.9 335.5
C2 N3 C4 HC41 176.2 94.5
C2 N3 C4 HC42 285.6 216.8
C2 N3 C14 C15 303.3 180.0
C2 N3 C14 O18 123.0 0.0
HC21 C2 C1 C5 125.9 262.8
HC21 C2 C1 HC11 251.1 21.1
HC21 C2 C1 HC12 0.6 144.4
C1 C2 HC21 N3 239.7 117.8
C1 C2 HC21 HC22 119.9 239.0
N3 C2 HC21 HC22 240.2 121.2
HC21 C2 N3 C4 203.5 120.7
HC21 C2 N3 C14 74.9 300.4
HC22 C2 C1 C5 235.3 141.6
HC22 C2 C1 HC11 0.6 260.0
HC22 C2 C1 HC12 110.0 23.3
C1 C2 HC22 N3 120.2 242.2
C1 C2 HC22 HC21 240.1 121.0
N3 C2 HC22 HC21 119.9 238.9
HC22 C2 N3 C4 94.1 241.9
HC22 C2 N3 C14 325.4 61.6
C1 C5 C4 N3 312.1 37.3
C4 N3 C2 HC21 203.5 120.7
C4 N3 C2 HC22 94.1 241.9
C2 N3 C4 C14 233.5 179.7
C4 N3 C14 C15 181.3 359.6
C4 N3 C14 O18 1.0 179.7
C5 C4 N3 HC41 234.7 241.1
C5 C4 N3 HC42 125.3 118.7
N3 C4 C5 HC51 186.9 279.2
N3 C4 C5 HC52 77.3 155.4
HC41 C4 N3 HC42 250.6 237.6
C14 N3 C2 HC21 74.9 300.4
C14 N3 C2 HC22 325.4 61.6
C2 N3 C14 C4 122.0 180.4
C14 N3 C4 C5 177.5 155.9
C14 N3 C4 HC41 302.7 274.8
C14 N3 C4 HC42 52.2 37.2
C15 C14 N3 O18 180.3 180.0
N3 C14 C15 C16 260.1 270.1
N3 C14 C15 N19 135.4 150.0
N3 C14 C15 H15 14.6 30.0
C4 C5 C1 HC11 262.9 206.0
C4 C5 C1 HC12 153.4 82.8
C1 C5 C4 HC51 125.2 118.1
C1 C5 C4 HC52 234.8 242.0
C5 C4 N3 C14 177.5 155.9
N3 C4 C5 HC41 125.2 119.1
N3 C4 C5 HC42 234.8 241.5
HC41 C4 C5 HC42 109.5 122.3
HC51 C5 C4 HC52 109.6 123.8
HC41 C4 N3 C14 302.7 274.8
N3 C4 HC41 C5 242.2 244.5
N3 C4 HC41 HC42 121.0 122.2
C5 C4 HC41 HC42 238.9 237.7
HC41 C4 C5 HC51 61.6 160.1
HC41 C4 C5 HC52 312.1 36.2
HC42 C4 N3 C14 52.2 37.2
N3 C4 HC42 C5 117.8 115.2
N3 C4 HC42 HC41 239.0 237.5
C5 C4 HC42 HC41 121.1 122.3
HC42 C4 C5 HC51 312.1 37.7
HC42 C4 C5 HC52 202.6 273.9
HC51 C5 C1 HC11 28.2 324.2
HC51 C5 C1 HC12 278.7 201.0
C1 C5 HC51 C4 243.8 247.8
C1 C5 HC51 HC52 121.9 123.9
HC51 C5 C4 HC41 61.6 160.1
HC51 C5 C4 HC42 312.1 37.7
C4 C5 HC51 HC52 238.1 236.1
HC52 C5 C1 HC11 137.7 88.0
HC52 C5 C1 HC12 28.2 324.8
C1 C5 HC52 C4 116.2 112.1
C1 C5 HC52 HC51 238.1 236.1
HC52 C5 C4 HC41 312.1 36.2
HC52 C5 C4 HC42 202.6 273.9
C4 C5 HC52 HC51 121.9 124.0
N3 C14 C15 O18 179.7 180.0
C16 C15 C14 N19 124.7 120.0
C16 C15 C14 H15 245.5 240.0
C14 C15 C16 C17 61.4 180.0
C14 C15 C16 C26 180.0 299.9
C14 C15 C16 H16 302.3 59.9
N19 C15 C14 H15 120.8 120.0
C14 C15 N19 H191 180.0 60.0
C14 C15 N19 H192 54.7 173.8
N3 C14 O18 C15 180.2 180.0
O18 C14 C15 C16 80.3 90.0
O18 C14 C15 N19 315.6 330.0
O18 C14 C15 H15 194.8 210.0
C16 C15 C14 O18 80.3 90.0
C14 C15 C16 N19 233.3 240.0
C14 C15 C16 H15 112.0 120.0
N19 C15 C16 H15 238.7 240.0
C16 C15 N19 H191 49.2 300.0
C16 C15 N19 H192 283.9 53.7
C17 C16 C15 C26 241.5 240.0
C17 C16 C15 H16 119.1 120.0
C15 C16 C17 H171 180.0 180.0
C15 C16 C17 H172 305.2 300.0
C15 C16 C17 H173 54.8 60.0
C26 C16 C15 H16 237.7 240.0
C15 C16 C26 H261 179.9 300.0
C15 C16 C26 H262 305.3 60.0
C15 C16 C26 H263 54.8 180.0
N19 C15 C14 O18 315.6 330.0
C14 C15 N19 C16 130.9 120.0
C14 C15 N19 H15 247.0 240.0
C16 C15 N19 H15 116.1 120.0
N19 C15 C16 C17 188.1 300.0
N19 C15 C16 C26 306.7 60.0
N19 C15 C16 H16 69.0 180.0
H191 N19 C15 H192 125.3 246.2
H15 C15 C14 O18 194.8 210.0
C14 C15 H15 C16 236.2 240.0
C14 C15 H15 N19 119.1 120.0
C16 C15 H15 N19 243.0 240.0
H15 C15 C16 C17 309.5 60.0
H15 C15 C16 C26 68.0 180.0
H15 C15 C16 H16 190.3 300.0
H15 C15 N19 H191 293.0 180.0
H15 C15 N19 H192 167.7 293.8
C17 C16 C15 N19 188.1 300.0
C17 C16 C15 H15 309.5 60.0
C15 C16 C17 C26 121.4 120.0
C15 C16 C17 H16 243.9 239.9
C26 C16 C17 H16 122.5 119.9
C17 C16 C26 H261 304.3 60.1
C17 C16 C26 H262 69.7 180.0
C17 C16 C26 H263 179.2 300.0
H171 C17 C16 H172 234.8 240.0
H171 C17 C16 H173 125.2 120.0
H172 C17 C16 H173 250.5 240.0
C26 C16 C15 N19 306.7 60.0
C26 C16 C15 H15 68.0 180.0
C15 C16 C26 C17 235.6 240.0
C15 C16 C26 H16 116.2 120.0
C17 C16 C26 H16 240.6 240.1
C26 C16 C17 H171 58.6 60.0
C26 C16 C17 H172 183.8 180.0
C26 C16 C17 H173 293.3 300.0
H261 C26 C16 H262 234.6 240.0
H261 C26 C16 H263 125.2 120.1
H262 C26 C16 H263 250.5 240.0
H16 C16 C15 N19 69.0 180.0
H16 C16 C15 H15 190.3 300.0
C15 C16 H16 C17 123.0 120.1
C15 C16 H16 C26 240.1 240.0
C17 C16 H16 C26 117.1 119.9
H16 C16 C17 H171 296.1 300.1
H16 C16 C17 H172 61.3 60.1
H16 C16 C17 H173 170.9 180.1
H16 C16 C26 H261 63.7 180.0
H16 C16 C26 H262 189.1 300.0
H16 C16 C26 H263 298.6 59.9
H171 C17 C16 C26 58.6 60.0
H171 C17 C16 H16 296.1 300.1
C16 C17 H171 H172 125.2 120.0
C16 C17 H171 H173 234.8 240.0
H172 C17 H171 H173 109.6 120.1
H172 C17 C16 C26 183.8 180.0
H172 C17 C16 H16 61.3 60.1
C16 C17 H172 H171 232.2 240.0
C16 C17 H172 H173 116.1 120.0
H171 C17 H172 H173 243.9 240.0
H173 C17 C16 C26 293.3 300.0
H173 C17 C16 H16 170.9 180.1
C16 C17 H173 H171 127.8 120.0
C16 C17 H173 H172 243.9 240.0
H171 C17 H173 H172 116.1 120.0
H191 N19 C15 H15 293.0 180.0
C15 N19 H191 H192 234.7 113.7
H192 N19 C15 H15 167.7 293.8
C15 N19 H192 H191 125.2 246.3
H261 C26 C16 H16 63.7 180.0
C16 C26 H261 H262 125.4 119.9
C16 C26 H261 H263 234.8 239.9
H262 C26 H261 H263 109.4 120.0
H262 C26 C16 H16 189.1 300.0
C16 C26 H262 H261 235.5 240.1
C16 C26 H262 H263 117.8 120.0
H261 C26 H262 H263 242.3 240.0
H263 C26 C16 H16 298.6 59.9
C16 C26 H263 H261 124.4 120.0
C16 C26 H263 H262 242.2 240.0
H261 C26 H263 H262 117.8 120.0