PDB Chemical Component A38

Ideal Model

Chemical Description

Name 8-OXY DEOXYADENOSINE-5'-MONOPHOSPHATE
Formula C10 H14 N5 O7 P
Formal charge 0
Molecular weight 347.221 g/mol
Component type DNA LINKING
Nonstandard Parent Id DA

Chemical features

Atom count 37
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms O3P
Bond count 39
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-8-oxoadenosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(6-amino-8-oxo-7H-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2N([C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)C(=O)Nc12
SMILES (CACTVS) Nc1ncnc2N([CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)C(=O)Nc12
Stereo SMILES (OpenEye) c1nc(c2c(n1)N(C(=O)N2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N
InChI descriptor InChI=1/C10H14N5O7P/c11-8-7-9(13-3-12-8)15(10(17)14-7)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H,14,17)(H2,11,12,13)(H2,18,19,20)/t4-,5+,6+/m0/s1/f/h14,18-19H,11H2
InChIKey descriptor QFGWDFAYOAGQDH-ZFTCRPPQDF

Status Information

Last modified 2009-01-07
Created 1996-06-10
Release status REL
Model PDB code 1FJB
Processing site RCSB