PDB Chemical Component A2Z

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A2Z

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.413	1.400
C1	C6	1.403	1.365
N1	C3	1.411	1.381
N1	C8	1.422	1.345
N1	C16	1.481	1.464
O1	C5	1.377	1.364
O1	C12	1.450	1.440
C2	C3	1.481	1.409
C2	C10	1.469	1.462
O2	C4	1.359	1.366
O2	C12	1.454	1.440
C3	C4	1.444	1.392
O3	C8	1.255	1.220
C4	C5	1.453	1.389
C5	C6	1.387	1.393
C8	C9	1.391	1.410
C9	C10	1.401	1.357
C10	C15	1.503	1.507
C1	H1	1.080	1.079
C6	H6	1.080	1.080
C9	H9	1.080	1.080
C12	H12	1.100	1.089
C12	H12A	1.100	1.090
C15	H15	1.099	1.090
C15	H15A	1.100	1.090
C15	H15B	1.100	1.089
C16	H16	1.101	1.090
C16	H16A	1.100	1.090
C16	H16B	1.100	1.090

Bond Angles for A2Z

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	121.6	119.9
C1	C2	C3	122.8	119.9
C1	C2	C10	121.9	121.1
C2	C1	H1	119.2	120.1
C1	C6	C5	117.7	120.7
C6	C1	H1	119.2	120.1
C1	C6	H6	121.2	119.6
C3	N1	C8	118.5	120.9
C3	N1	C16	121.4	119.6
N1	C3	C2	122.5	119.6
N1	C3	C4	123.5	120.9
C8	N1	C16	120.1	119.5
N1	C8	O3	120.5	119.2
N1	C8	C9	121.2	121.7
N1	C16	H16	109.5	109.5
N1	C16	H16A	109.5	109.5
N1	C16	H16B	109.4	109.5
C5	O1	C12	109.3	105.6
O1	C5	C4	106.3	108.6
O1	C5	C6	130.3	131.1
O1	C12	O2	106.1	103.6
O1	C12	H12	110.6	110.7
O1	C12	H12A	110.6	110.5
C3	C2	C10	115.3	119.0
C2	C3	C4	114.1	119.5
C2	C10	C9	120.5	118.6
C2	C10	C15	118.5	120.7
C4	O2	C12	107.2	105.4
O2	C4	C3	128.8	131.5
O2	C4	C5	110.7	108.7
O2	C12	H12	110.6	110.6
O2	C12	H12A	110.6	110.5
C3	C4	C5	120.5	119.8
O3	C8	C9	118.3	119.2
C4	C5	C6	123.4	120.3
C5	C6	H6	121.2	119.7
C8	C9	C10	122.0	120.3
C8	C9	H9	119.0	119.9
C9	C10	C15	121.0	120.7
C10	C9	H9	119.0	119.9
C10	C15	H15	109.5	109.4
C10	C15	H15A	109.5	109.4
C10	C15	H15B	109.5	109.5
H12	C12	H12A	108.3	110.7
H15	C15	H15A	109.4	109.5
H15	C15	H15B	109.5	109.5
H15A	C15	H15B	109.5	109.5
H16	C16	H16A	109.4	109.5
H16	C16	H16B	109.4	109.4
H16A	C16	H16B	109.5	109.4

Torsion Angles for A2Z

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	C5	1.0	0.0
C6	C1	C2	H1	180.0	180.3
C2	C1	C6	H6	181.0	180.0
N1	C3	C2	C1	179.2	180.1
C3	C2	C1	C10	180.1	180.0
C1	C2	C3	C4	359.6	0.2
C1	C2	C10	C9	181.2	180.0
C1	C2	C10	C15	359.9	359.9
C6	C1	C2	C3	0.1	359.9
C6	C1	C2	C10	180.0	179.9
C2	C1	C6	H1	180.0	179.7
O1	C5	C6	C1	180.9	180.1
C4	C5	C6	C1	358.1	0.0
C5	C6	C1	H6	180.0	180.0
C1	C2	C3	N1	179.2	180.1
C8	N1	C3	C16	178.4	180.1
C3	N1	C8	O3	180.4	180.0
C3	N1	C8	C9	1.5	360.0
C3	N1	C16	H16	180.0	90.0
C3	N1	C16	H16A	300.0	210.1
C3	N1	C16	H16B	60.0	330.1
N1	C3	C2	C10	359.2	0.1
C2	C3	N1	C4	180.5	180.1
O2	C4	C3	N1	359.7	0.0
N1	C3	C4	C5	180.0	180.0
C3	N1	C8	C16	181.6	179.9
C8	N1	C3	C2	359.5	360.0
C8	N1	C3	C4	179.0	179.9
C8	N1	C16	H16	1.7	269.9
C8	N1	C16	H16A	121.7	30.0
C8	N1	C16	H16B	241.7	150.0
O3	C8	N1	C9	179.0	180.0
N1	C8	C9	C10	358.9	0.1
N1	C8	C9	H9	178.9	180.0
C3	N1	C16	C8	178.3	180.1
C16	N1	C3	C2	181.1	179.9
C16	N1	C3	C4	0.6	359.8
C16	N1	C8	O3	358.8	0.1
C16	N1	C8	C9	179.9	180.1
H16	C16	N1	H16A	240.0	240.0
H16	C16	N1	H16B	120.0	120.0
H16A	C16	N1	H16B	240.0	240.0
C1	C6	C5	O1	180.9	180.1
C5	O1	C12	O2	6.6	27.1
C5	O1	C12	H12	126.6	145.7
C5	O1	C12	H12A	246.6	268.6
O2	C4	C5	O1	359.7	360.0
C3	C4	C5	O1	179.4	180.0
C4	C5	O1	C6	182.4	180.0
O1	C5	C6	H6	0.9	0.1
C12	O1	C5	C4	356.0	342.8
C12	O1	C5	C6	173.6	162.7
C4	O2	C12	O1	353.4	333.0
O2	C12	O1	H12	240.0	241.4
O2	C12	O1	H12A	120.0	118.4
H12	C12	O1	H12A	240.0	237.0
C3	C2	C1	C6	0.1	359.9
C1	C2	C3	C10	179.9	180.0
C3	C2	C1	H1	180.1	179.6
C2	C3	N1	C8	359.5	360.0
C2	C3	N1	C16	181.1	179.9
N1	C3	C2	C4	179.5	179.9
C3	C2	C10	C9	1.1	360.0
C3	C2	C10	C15	179.8	179.9
O2	C4	C3	C2	179.2	179.9
C2	C3	C4	C5	359.5	359.9
C10	C2	C1	C6	180.0	179.9
C1	C2	C10	C3	180.1	180.0
C10	C2	C1	H1	0.0	359.6
C10	C2	C3	C4	179.7	180.2
C8	C9	C10	C2	359.8	360.0
C9	C10	C2	C15	181.3	180.1
C2	C10	C9	H9	179.8	180.0
C2	C10	C15	H15	180.0	90.0
C2	C10	C15	H15A	300.0	210.0
C2	C10	C15	H15B	60.0	330.0
N1	C3	C4	O2	359.7	0.0
O1	C5	C4	O2	359.7	360.0
O1	C12	O2	C4	353.4	333.0
C2	C3	C4	O2	179.2	179.9
C4	O2	C12	H12	233.3	214.3
C4	O2	C12	H12A	113.4	91.4
C3	C4	O2	C5	180.3	179.9
O2	C4	C5	C6	181.9	180.0
O1	C12	O2	H12	120.0	118.6
O1	C12	O2	H12A	240.0	241.6
C12	O2	C4	C3	184.7	197.2
C12	O2	C4	C5	4.4	17.3
H12	C12	O2	H12A	120.0	122.9
C4	C3	N1	C8	179.0	179.9
C4	C3	N1	C16	0.6	359.8
N1	C3	C4	C2	180.5	180.1
O1	C5	C4	C3	179.4	180.0
C4	C3	C2	C10	179.7	180.2
C3	C4	O2	C12	184.7	197.2
O2	C4	C3	C5	179.7	180.1
C3	C4	C5	C6	1.6	0.1
O3	C8	N1	C16	358.8	0.1
N1	C8	O3	C9	181.0	180.0
O3	C8	C9	C10	179.9	180.1
O3	C8	C9	H9	359.9	0.0
C1	C6	C5	C4	358.1	0.0
C4	C5	O1	C12	356.0	342.8
O1	C5	C4	C6	177.8	180.0
C5	C4	O2	C12	4.4	17.3
O2	C4	C5	C3	180.3	180.0
C4	C5	C6	H6	178.1	180.0
C5	C6	C1	H1	181.0	180.3
C1	C6	C5	H6	180.0	180.0
C6	C5	O1	C12	173.6	162.7
O1	C5	C6	C4	182.8	180.1
C9	C8	N1	C16	179.9	180.1
N1	C8	C9	O3	179.0	180.0
C2	C10	C9	C8	359.8	360.0
C8	C9	C10	C15	181.2	180.0
C10	C9	C8	H9	180.0	180.0
C2	C10	C9	C15	178.6	179.9
C8	C9	C10	H9	180.0	180.0
C9	C10	C15	H15	358.7	270.0
C9	C10	C15	H15A	118.6	29.9
C9	C10	C15	H15B	238.6	149.9
C2	C10	C15	C9	181.4	180.1
C15	C10	C9	H9	1.2	0.0
H15	C15	C10	H15A	240.0	240.0
H15	C15	C10	H15B	120.1	120.0
H15A	C15	C10	H15B	240.0	240.0
C2	C1	H1	C6	180.0	180.3
H1	C1	C2	C3	180.1	179.6
H1	C1	C2	C10	0.0	359.6
H1	C1	C6	C5	181.0	180.3
H1	C1	C6	H6	1.0	0.3
C1	C6	H6	C5	180.0	180.0
H6	C6	C1	H1	1.0	0.3
C8	C9	H9	C10	180.0	180.0
H9	C9	C10	C15	1.2	0.0
O1	C12	H12	O2	242.8	245.7
O1	C12	H12	H12A	121.4	122.9
O2	C12	H12	H12A	238.6	237.1
O1	C12	H12A	O2	117.2	114.1
O1	C12	H12A	H12	238.6	237.0
O2	C12	H12A	H12	121.4	122.9
C10	C15	H15	H15A	120.0	119.9
C10	C15	H15	H15B	240.0	240.0
H15A	C15	H15	H15B	120.0	120.0
C10	C15	H15A	H15	240.0	240.1
C10	C15	H15A	H15B	120.0	120.0
H15	C15	H15A	H15B	240.0	240.0
C10	C15	H15B	H15	120.0	120.0
C10	C15	H15B	H15A	240.0	240.0
H15	C15	H15B	H15A	120.0	120.0
N1	C16	H16	H16A	120.0	120.1
N1	C16	H16	H16B	240.0	240.0
H16A	C16	H16	H16B	120.0	119.9
N1	C16	H16A	H16	239.9	240.0
N1	C16	H16A	H16B	120.0	120.0
H16	C16	H16A	H16B	240.0	240.1
N1	C16	H16B	H16	120.0	120.0
N1	C16	H16B	H16A	240.0	239.9
H16	C16	H16B	H16A	120.0	120.0