PDB Chemical Component A2G
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for A2G
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O5 |
C5 |
1.417 |
1.429 |
C1 |
O5 |
1.424 |
1.429 |
C1 |
C2 |
1.519 |
1.531 |
C1 |
H1 |
1.100 |
1.090 |
O1 |
C1 |
1.390 |
1.429 |
O1 |
HO1 |
0.950 |
0.968 |
C2 |
C3 |
1.530 |
1.532 |
C2 |
H2 |
1.100 |
1.090 |
N2 |
C2 |
1.440 |
1.465 |
N2 |
HN2 |
1.000 |
0.971 |
C3 |
C4 |
1.500 |
1.532 |
C3 |
O3 |
1.423 |
1.429 |
C3 |
H3 |
1.100 |
1.091 |
O3 |
HO3 |
0.950 |
0.966 |
C4 |
O4 |
1.422 |
1.429 |
C4 |
H4 |
1.101 |
1.090 |
O4 |
HO4 |
0.950 |
0.967 |
C5 |
C4 |
1.520 |
1.531 |
C5 |
C6 |
1.517 |
1.530 |
C5 |
H5 |
1.100 |
1.090 |
C6 |
O6 |
1.407 |
1.429 |
C6 |
H61 |
1.100 |
1.089 |
C7 |
N2 |
1.306 |
1.348 |
O7 |
C7 |
1.234 |
1.213 |
C8 |
C7 |
1.517 |
1.506 |
C8 |
H81 |
1.100 |
1.091 |
C8 |
H82 |
1.100 |
1.090 |
C8 |
H83 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.090 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for A2G
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
O5 |
C5 |
121.8 |
114.1 |
O5 |
C5 |
C4 |
113.7 |
109.5 |
O5 |
C5 |
C6 |
105.7 |
109.5 |
O5 |
C5 |
H5 |
110.3 |
109.5 |
C2 |
C1 |
H1 |
105.5 |
109.5 |
O1 |
C1 |
C2 |
114.1 |
109.5 |
C1 |
C2 |
C3 |
111.6 |
109.2 |
C1 |
C2 |
H2 |
104.6 |
109.5 |
O1 |
C1 |
H1 |
105.5 |
109.5 |
C3 |
C2 |
H2 |
110.3 |
109.6 |
N2 |
C2 |
C3 |
108.4 |
109.5 |
C2 |
C3 |
C4 |
113.2 |
109.0 |
C2 |
C3 |
O3 |
111.2 |
109.5 |
C2 |
C3 |
H3 |
105.0 |
109.5 |
N2 |
C2 |
H2 |
108.2 |
109.5 |
C7 |
N2 |
HN2 |
112.7 |
120.0 |
O3 |
C3 |
C4 |
107.4 |
109.5 |
C4 |
C3 |
H3 |
109.0 |
109.6 |
C3 |
C4 |
O4 |
107.5 |
109.5 |
C3 |
C4 |
H4 |
110.1 |
109.5 |
O3 |
C3 |
H3 |
111.0 |
109.6 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
O4 |
C4 |
H4 |
109.4 |
109.5 |
C4 |
O4 |
HO4 |
109.5 |
114.0 |
C5 |
C4 |
H4 |
104.0 |
109.6 |
C6 |
C5 |
H5 |
111.7 |
109.5 |
C5 |
C6 |
O6 |
117.3 |
109.5 |
C5 |
C6 |
H61 |
106.9 |
109.5 |
C5 |
C6 |
H62 |
106.9 |
109.5 |
O6 |
C6 |
H61 |
106.9 |
109.5 |
O6 |
C6 |
H62 |
106.9 |
109.5 |
C6 |
O6 |
HO6 |
109.5 |
114.0 |
H61 |
C6 |
H62 |
111.9 |
109.5 |
H81 |
C8 |
H82 |
109.5 |
109.4 |
H81 |
C8 |
H83 |
109.5 |
109.4 |
H82 |
C8 |
H83 |
109.5 |
109.4 |
Torsion Angles for A2G
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O5 |
C5 |
C4 |
H4 |
199.1 |
182.5 |
C6 |
C5 |
O5 |
H5 |
239.1 |
240.0 |
O5 |
C5 |
C6 |
O6 |
135.9 |
65.0 |
O5 |
C5 |
C6 |
H61 |
255.9 |
185.0 |
O5 |
C5 |
C6 |
H62 |
15.9 |
305.0 |
C1 |
O5 |
C5 |
C4 |
43.1 |
61.1 |
C1 |
O5 |
C5 |
C6 |
166.6 |
181.1 |
C1 |
O5 |
C5 |
H5 |
287.5 |
301.2 |
C2 |
C1 |
O5 |
C5 |
313.7 |
298.9 |
O1 |
C1 |
C2 |
H1 |
115.4 |
120.0 |
C3 |
C2 |
C1 |
H2 |
119.3 |
120.0 |
N2 |
C2 |
C1 |
C3 |
123.0 |
119.9 |
C1 |
C2 |
C3 |
C4 |
308.6 |
303.0 |
C1 |
C2 |
C3 |
O3 |
187.5 |
183.1 |
C1 |
C2 |
C3 |
H3 |
67.4 |
62.9 |
N2 |
C2 |
C1 |
H2 |
242.2 |
239.9 |
H1 |
C1 |
O5 |
C5 |
198.0 |
178.9 |
O1 |
C1 |
H1 |
C2 |
238.9 |
240.0 |
H1 |
C1 |
C2 |
C3 |
165.5 |
177.6 |
H1 |
C1 |
C2 |
H2 |
46.2 |
57.6 |
O1 |
C1 |
O5 |
C5 |
82.2 |
58.9 |
C2 |
C1 |
O1 |
H1 |
244.7 |
240.0 |
O1 |
C1 |
C2 |
C3 |
280.9 |
297.6 |
O1 |
C1 |
C2 |
H2 |
161.6 |
177.7 |
HO1 |
O1 |
C1 |
C2 |
306.9 |
179.9 |
HO1 |
O1 |
C1 |
H1 |
62.3 |
300.0 |
C3 |
C2 |
C1 |
H1 |
165.5 |
177.6 |
C1 |
C2 |
C3 |
H2 |
244.2 |
240.1 |
N2 |
C2 |
C3 |
H2 |
118.2 |
120.2 |
O3 |
C3 |
C2 |
C4 |
238.9 |
240.1 |
C4 |
C3 |
C2 |
H3 |
241.2 |
240.1 |
C2 |
C3 |
C4 |
O4 |
282.4 |
297.1 |
C2 |
C3 |
C4 |
H4 |
163.3 |
177.0 |
O3 |
C3 |
C2 |
H3 |
120.2 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
180.0 |
H2 |
C2 |
C1 |
H1 |
46.2 |
57.6 |
C1 |
C2 |
H2 |
C3 |
120.2 |
119.7 |
N2 |
C2 |
H2 |
C3 |
241.7 |
239.8 |
H2 |
C2 |
C3 |
C4 |
64.4 |
62.9 |
H2 |
C2 |
C3 |
O3 |
303.4 |
303.1 |
H2 |
C2 |
C3 |
H3 |
183.2 |
182.8 |
N2 |
C2 |
C1 |
H1 |
288.5 |
297.5 |
C1 |
C2 |
N2 |
C3 |
235.3 |
240.3 |
C1 |
C2 |
N2 |
H2 |
115.7 |
120.1 |
C3 |
C2 |
N2 |
H2 |
240.4 |
239.8 |
N2 |
C2 |
C3 |
C4 |
182.7 |
183.1 |
N2 |
C2 |
C3 |
O3 |
61.6 |
63.3 |
N2 |
C2 |
C3 |
H3 |
301.4 |
303.0 |
HN2 |
N2 |
C2 |
C3 |
51.8 |
24.6 |
HN2 |
N2 |
C2 |
H2 |
171.4 |
144.8 |
O5 |
C5 |
C4 |
C3 |
318.3 |
302.4 |
C4 |
C3 |
C2 |
H2 |
64.4 |
62.9 |
C2 |
C3 |
C4 |
O3 |
236.8 |
240.1 |
C2 |
C3 |
C4 |
H3 |
116.5 |
119.9 |
O3 |
C3 |
C4 |
H3 |
239.6 |
239.7 |
C4 |
C3 |
O3 |
HO3 |
55.6 |
60.4 |
O4 |
C4 |
C3 |
H4 |
119.1 |
120.1 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H4 |
244.5 |
240.0 |
O3 |
C3 |
C2 |
H2 |
303.4 |
303.1 |
C2 |
C3 |
O3 |
C4 |
124.4 |
119.6 |
C2 |
C3 |
O3 |
H3 |
243.4 |
239.8 |
C4 |
C3 |
O3 |
H3 |
119.1 |
120.2 |
O3 |
C3 |
C4 |
O4 |
45.6 |
56.9 |
O3 |
C3 |
C4 |
H4 |
286.5 |
296.8 |
H3 |
C3 |
C2 |
H2 |
183.2 |
182.8 |
C2 |
C3 |
H3 |
C4 |
238.4 |
240.4 |
C2 |
C3 |
H3 |
O3 |
120.3 |
120.2 |
O3 |
C3 |
H3 |
C4 |
118.1 |
120.2 |
H3 |
C3 |
C4 |
O4 |
166.0 |
177.2 |
H3 |
C3 |
C4 |
H4 |
46.9 |
57.1 |
H3 |
C3 |
O3 |
HO3 |
296.6 |
300.2 |
HO3 |
O3 |
C3 |
C4 |
55.6 |
60.4 |
HO3 |
O3 |
C3 |
H3 |
296.6 |
300.2 |
O5 |
C5 |
C4 |
O4 |
80.5 |
62.3 |
O4 |
C4 |
C3 |
H3 |
166.0 |
177.2 |
C3 |
C4 |
O4 |
H4 |
240.4 |
239.9 |
C5 |
C4 |
O4 |
H4 |
115.5 |
120.2 |
H4 |
C4 |
C3 |
H3 |
46.9 |
57.1 |
C3 |
C4 |
H4 |
O4 |
118.0 |
120.1 |
H4 |
C4 |
O4 |
HO4 |
299.6 |
300.1 |
HO4 |
O4 |
C4 |
H4 |
299.6 |
300.1 |
O5 |
C5 |
C4 |
C6 |
119.9 |
120.0 |
O5 |
C5 |
C4 |
H5 |
240.4 |
240.0 |
C5 |
C4 |
C3 |
H3 |
291.3 |
297.1 |
C3 |
C4 |
C5 |
H4 |
119.2 |
120.0 |
O4 |
C4 |
C5 |
H4 |
241.4 |
239.8 |
C5 |
C4 |
O4 |
HO4 |
55.1 |
60.3 |
O5 |
C5 |
C6 |
C4 |
235.6 |
240.0 |
O5 |
C5 |
C6 |
H5 |
119.9 |
120.0 |
C6 |
C5 |
C4 |
H4 |
79.3 |
62.4 |
O6 |
C6 |
C5 |
H61 |
240.0 |
240.0 |
O6 |
C6 |
C5 |
H62 |
120.0 |
120.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
240.0 |
240.0 |
O5 |
C5 |
H5 |
C4 |
121.9 |
120.0 |
O5 |
C5 |
H5 |
C6 |
242.8 |
240.0 |
H5 |
C5 |
C4 |
H4 |
318.7 |
302.4 |
H5 |
C5 |
C6 |
O6 |
16.0 |
305.0 |
H5 |
C5 |
C6 |
H61 |
135.9 |
64.9 |
H5 |
C5 |
C6 |
H62 |
256.0 |
185.0 |
O6 |
C6 |
C5 |
H5 |
16.0 |
305.0 |
C5 |
C6 |
O6 |
H61 |
120.0 |
120.0 |
C5 |
C6 |
O6 |
H62 |
240.0 |
240.0 |
H61 |
C6 |
O6 |
H62 |
120.0 |
120.0 |
H61 |
C6 |
C5 |
H5 |
135.9 |
64.9 |
C5 |
C6 |
H61 |
O6 |
233.5 |
240.0 |
C5 |
C6 |
H61 |
H62 |
116.8 |
120.0 |
O6 |
C6 |
H61 |
H62 |
243.3 |
240.0 |
H61 |
C6 |
O6 |
HO6 |
60.0 |
60.1 |
C7 |
N2 |
C2 |
H2 |
351.3 |
324.9 |
O7 |
C7 |
N2 |
HN2 |
188.7 |
180.0 |
C8 |
C7 |
N2 |
HN2 |
9.6 |
0.0 |
H82 |
C8 |
H81 |
H83 |
120.0 |
119.9 |
H81 |
C8 |
H82 |
H83 |
240.0 |
240.1 |
H81 |
C8 |
H83 |
H82 |
120.0 |
119.9 |
H62 |
C6 |
C5 |
H5 |
256.0 |
185.0 |
C5 |
C6 |
H62 |
O6 |
126.5 |
120.0 |
C5 |
C6 |
H62 |
H61 |
243.2 |
240.0 |
O6 |
C6 |
H62 |
H61 |
116.7 |
120.0 |
H62 |
C6 |
O6 |
HO6 |
300.0 |
300.0 |
HO6 |
O6 |
C6 |
H61 |
60.0 |
60.1 |
HO6 |
O6 |
C6 |
H62 |
300.0 |
300.0 |