PDB Chemical Component A25

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A25

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.439 1.400
C1 C6 1.413 1.393
C1 H1 1.080 1.085
C2 O8 1.409 1.372
C2 C3 1.432 1.412
C3 C4 1.432 1.400
C3 N10 1.406 1.422
C4 C5 1.410 1.397
C4 H4 1.080 1.083
C5 C6 1.406 1.390
C5 CL7 1.728 1.723
C6 H6 1.080 1.086
O8 C9 1.422 1.431
C9 C23 1.524 1.528
C9 H91 1.100 1.096
C9 H92 1.100 1.097
N10 C11 1.389 1.386
N10 H10 1.000 1.017
C11 O13 1.226 1.234
C11 N12 1.364 1.392
N12 C14 1.378 1.414
N12 H12 0.999 1.017
C14 C19 1.426 1.386
C14 N15 1.371 1.349
N15 C16 1.372 1.351
C16 C17 1.431 1.377
C16 O20 1.404 1.371
C17 N18 1.362 1.344
C17 H17 1.080 1.083
N18 C19 1.365 1.350
C19 H19 1.080 1.085
O20 C21 1.435 1.432
C21 C22 1.539 1.531
C21 H211 1.100 1.096
C21 H212 1.100 1.097
C22 C24 1.506 1.533
C22 H221 1.100 1.095
C22 H222 1.100 1.097
C23 C24 1.533 1.533
C23 H231 1.100 1.097
C23 H232 1.100 1.095
C24 H241 1.100 1.097
C24 H242 1.100 1.096

Bond Angles for A25

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 120.9 120.2
C2 C1 H1 119.5 121.8
C1 C2 O8 124.8 123.6
C1 C2 C3 119.2 120.2
C6 C1 H1 119.6 118.0
C1 C6 C5 119.0 120.0
C1 C6 H6 120.5 120.2
C3 C2 O8 116.0 116.2
C2 O8 C9 117.8 117.0
C2 C3 C4 119.2 118.8
C2 C3 N10 119.2 117.6
C4 C3 N10 121.6 123.6
C3 C4 C5 120.0 120.6
C3 C4 H4 120.0 122.7
C3 N10 C11 126.8 127.9
C3 N10 H10 116.6 114.6
C5 C4 H4 120.0 116.8
C4 C5 C6 121.7 120.3
C4 C5 CL7 119.0 119.9
C6 C5 CL7 119.3 119.8
C5 C6 H6 120.5 119.9
O8 C9 C23 109.6 107.4
O8 C9 H91 109.4 110.6
O8 C9 H92 109.4 110.0
C23 C9 H91 109.4 109.9
C23 C9 H92 109.4 108.9
C9 C23 C24 109.4 111.4
C9 C23 H231 109.5 109.7
C9 C23 H232 109.5 108.5
H91 C9 H92 109.5 110.0
C11 N10 H10 116.6 117.4
N10 C11 O13 123.6 125.2
N10 C11 N12 116.5 116.2
N12 C11 O13 119.9 118.6
C11 N12 C14 131.6 130.0
C11 N12 H12 114.2 114.8
C14 N12 H12 114.2 115.2
N12 C14 C19 123.7 117.1
N12 C14 N15 116.2 122.8
N15 C14 C19 120.1 120.1
C14 C19 N18 122.0 123.1
C14 C19 H19 119.0 122.2
C14 N15 C16 118.5 117.0
N15 C16 C17 120.4 122.3
N15 C16 O20 114.5 116.5
C17 C16 O20 125.0 121.0
C16 C17 N18 121.4 121.4
C16 C17 H17 119.3 122.6
C16 O20 C21 118.2 111.2
N18 C17 H17 119.3 116.0
C17 N18 C19 117.6 116.2
N18 C19 H19 119.0 114.7
O20 C21 C22 110.4 108.6
O20 C21 H211 109.2 111.5
O20 C21 H212 109.0 109.0
C22 C21 H211 109.2 110.3
C22 C21 H212 109.0 109.0
C21 C22 C24 110.2 113.5
C21 C22 H221 109.2 109.8
C21 C22 H222 109.1 108.2
H211 C21 H212 110.2 108.3
C24 C22 H221 109.2 110.4
C24 C22 H222 109.0 107.4
C22 C24 C23 127.2 113.3
C22 C24 H241 103.9 108.5
C22 C24 H242 99.8 109.6
H221 C22 H222 110.1 107.3
C24 C23 H231 109.5 109.0
C24 C23 H232 109.5 110.5
C23 C24 H241 104.0 108.4
C23 C24 H242 99.8 110.8
H231 C23 H232 109.4 107.6
H241 C24 H242 124.7 106.0

Torsion Angles for A25

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 180.6
C2 C1 C6 C5 0.1 0.4
C2 C1 C6 H6 180.1 180.0
C3 C2 C1 O8 180.0 178.6
C1 C2 O8 C9 22.9 335.4
C1 C2 C3 C4 359.9 0.1
C1 C2 C3 N10 180.1 179.7
C2 C1 C6 H1 180.0 179.4
C6 C1 C2 O8 180.0 181.0
C6 C1 C2 C3 0.0 359.6
C4 C5 C6 C1 359.9 360.0
C1 C6 C5 CL7 179.9 179.7
C5 C6 C1 H6 180.0 180.4
C2 C1 H1 C6 180.0 180.6
H1 C1 C2 O8 360.0 0.4
H1 C1 C2 C3 180.0 179.0
H1 C1 C6 C5 180.1 181.0
H1 C1 C6 H6 0.1 0.6
O8 C2 C1 C6 180.0 181.0
O8 C2 C1 H1 360.0 0.4
C1 C2 O8 C3 180.0 178.7
O8 C2 C3 C4 179.9 178.8
O8 C2 C3 N10 0.1 358.4
C2 O8 C9 C23 197.7 191.5
C2 O8 C9 H91 317.7 71.5
C2 O8 C9 H92 77.7 309.8
C3 C2 C1 C6 0.0 359.6
C3 C2 C1 H1 180.0 179.0
C1 C2 C3 O8 180.0 181.3
C3 C2 O8 C9 202.9 156.7
C4 C3 C2 N10 179.8 180.4
C2 C3 C4 C5 0.1 0.3
C2 C3 C4 H4 180.1 181.3
C2 C3 N10 C11 189.2 188.3
C2 C3 N10 H10 9.1 3.9
C4 C3 C2 O8 179.9 178.8
C2 C3 C4 N10 180.2 179.6
C4 C3 N10 C11 9.4 7.9
C4 C3 N10 H10 189.4 183.5
C5 C4 C3 H4 180.0 178.9
C3 C4 C5 C6 360.0 359.7
C3 C4 C5 CL7 180.0 180.0
N10 C3 C2 O8 0.1 358.4
C2 C3 N10 C4 179.8 180.4
N10 C3 C4 C5 179.9 180.7
N10 C3 C4 H4 359.9 1.7
C11 N10 C3 H10 180.0 184.4
C3 N10 C11 O13 0.0 2.9
C3 N10 C11 N12 180.2 181.1
C1 C6 C5 C4 359.9 360.0
C5 C4 C3 N10 179.9 180.7
C3 C4 C5 H4 180.0 181.0
C6 C5 C4 CL7 180.0 179.7
C4 C5 C6 H6 179.9 180.4
H4 C4 C3 N10 359.9 1.7
C3 C4 H4 C5 180.0 179.0
H4 C4 C5 C6 180.0 178.7
H4 C4 C5 CL7 0.0 359.0
C5 C6 C1 H1 180.1 181.0
C1 C6 C5 H6 180.0 179.6
C6 C5 C4 H4 180.0 178.7
C4 C5 C6 CL7 180.0 180.3
CL7 C5 C4 H4 0.0 359.0
C4 C5 CL7 C6 180.0 179.7
CL7 C5 C6 H6 359.9 0.0
H6 C6 C1 H1 0.1 0.6
C1 C6 H6 C5 180.0 180.4
H6 C6 C5 CL7 359.9 0.0
C23 C9 O8 H91 240.0 119.9
C23 C9 O8 H92 120.0 241.6
O8 C9 C23 C24 256.8 288.9
O8 C9 C23 H231 16.8 168.1
O8 C9 C23 H232 136.8 50.7
H91 C9 O8 H92 240.0 121.7
O8 C9 C23 H91 120.0 239.6
O8 C9 C23 H92 240.0 119.1
H91 C9 C23 H92 120.0 239.5
C22 C24 C23 C9 82.5 164.2
C24 C23 C9 H231 240.0 120.8
C24 C23 C9 H232 120.0 238.2
C9 C23 C24 H241 322.5 284.7
C9 C23 C24 H242 192.9 40.6
H231 C23 C9 H232 240.0 117.3
O8 C9 H91 C23 239.9 118.4
O8 C9 H91 H92 120.0 238.3
C23 C9 H91 H92 240.0 119.9
H91 C9 C23 C24 136.8 49.2
H91 C9 C23 H231 256.8 288.4
H91 C9 C23 H232 16.8 171.1
O8 C9 H92 C23 120.1 242.6
O8 C9 H92 H91 240.0 122.1
C23 C9 H92 H91 120.0 239.5
H92 C9 C23 C24 16.8 169.8
H92 C9 C23 H231 136.8 48.9
H92 C9 C23 H232 256.8 291.6
C3 N10 C11 H10 180.0 175.5
N12 C11 N10 O13 180.2 178.1
N10 C11 N12 C14 0.2 6.3
N10 C11 N12 H12 180.2 185.4
C3 N10 H10 C11 180.0 183.9
H10 N10 C11 O13 180.0 187.4
H10 N10 C11 N12 0.2 5.5
O13 C11 N10 H10 180.0 187.4
N10 C11 O13 N12 180.2 178.1
O13 C11 N12 C14 180.4 184.6
O13 C11 N12 H12 0.3 3.7
N12 C11 N10 H10 0.2 5.5
N10 C11 N12 O13 179.8 181.7
C14 N12 C11 H12 180.0 180.9
C11 N12 C14 C19 156.9 183.0
C11 N12 C14 N15 336.7 4.2
C14 N12 C11 O13 180.4 184.6
C11 N12 C14 H12 180.0 179.1
N15 C14 N12 C19 179.8 181.2
N12 C14 C19 N18 179.9 180.9
N12 C14 C19 H19 359.9 0.8
N12 C14 N15 C16 180.2 179.3
H12 N12 C11 O13 0.3 3.7
C11 N12 H12 C14 180.0 180.8
H12 N12 C14 C19 336.9 3.9
H12 N12 C14 N15 156.8 185.1
C19 C14 N12 H12 336.9 3.9
N12 C14 C19 N15 179.8 181.2
C19 C14 N15 C16 0.0 0.6
C17 N18 C19 C14 359.8 0.3
N18 C19 C14 H19 180.0 180.1
N15 C14 N12 H12 156.8 185.1
N12 C14 N15 C19 180.2 178.7
N15 C14 C19 N18 0.1 359.7
N15 C14 C19 H19 180.1 179.6
C14 N15 C16 C17 359.9 359.0
C14 N15 C16 O20 179.8 183.5
C16 N15 C14 C19 0.0 0.6
C17 C16 N15 O20 180.1 175.5
N15 C16 C17 N18 360.0 1.0
N15 C16 C17 H17 180.0 181.8
N15 C16 O20 C21 135.6 248.8
N15 C16 C17 O20 179.9 184.7
C17 C16 O20 C21 315.5 73.2
N18 C17 C16 H17 180.0 179.2
C16 C17 N18 C19 0.1 359.3
N15 C16 O20 C17 180.1 175.6
O20 C16 C17 N18 180.1 176.4
O20 C16 C17 H17 0.1 357.2
C16 O20 C21 C22 274.4 158.7
C16 O20 C21 H211 34.3 36.9
C16 O20 C21 H212 154.7 277.4
C14 C19 N18 C17 359.8 0.3
N18 C17 C16 O20 180.1 176.4
C16 C17 N18 H17 180.0 180.7
C17 N18 C19 H19 179.8 180.4
H17 C17 C16 O20 0.1 357.2
C16 C17 H17 N18 180.0 179.3
H17 C17 N18 C19 180.1 178.6
C14 C19 N18 H19 180.0 180.0
C19 N18 C17 H17 180.1 178.6
C14 C19 H19 N18 180.0 180.0
C22 C21 O20 H211 240.0 121.8
C22 C21 O20 H212 119.6 241.3
O20 C21 C22 C24 273.1 305.0
O20 C21 C22 H221 33.1 180.9
O20 C21 C22 H222 153.4 64.1
H211 C21 O20 H212 239.6 119.5
O20 C21 C22 H211 120.0 237.5
O20 C21 C22 H212 240.4 118.7
H211 C21 C22 H212 120.4 241.2
C24 C22 C21 H221 240.0 124.1
C24 C22 C21 H222 119.7 240.9
C21 C22 C24 C23 63.6 289.8
C21 C22 C24 H241 183.6 169.3
C21 C22 C24 H242 313.3 54.0
H221 C22 C21 H222 239.7 116.8
O20 C21 H211 C22 239.3 120.8
O20 C21 H211 H212 119.6 240.0
C22 C21 H211 H212 240.3 119.2
H211 C21 C22 C24 153.1 67.5
H211 C21 C22 H221 273.1 303.4
H211 C21 C22 H222 33.5 186.6
O20 C21 H212 C22 120.5 241.5
O20 C21 H212 H211 240.2 121.5
C22 C21 H212 H211 119.8 240.0
H212 C21 C22 C24 32.7 186.3
H212 C21 C22 H221 152.7 62.2
H212 C21 C22 H222 273.1 305.4
C9 C23 C24 C22 82.5 164.2
C24 C22 C21 H211 153.1 67.5
C24 C22 C21 H212 32.7 186.3
C21 C22 C24 H221 120.0 236.2
C21 C22 C24 H222 240.3 119.6
H221 C22 C24 H222 120.3 243.4
C22 C24 C23 H231 322.5 285.4
C22 C24 C23 H232 202.5 43.5
C23 C24 C22 H241 240.0 120.4
C23 C24 C22 H242 110.4 235.7
H241 C24 C22 H242 230.4 115.3
H221 C22 C21 H211 273.1 303.4
H221 C22 C21 H212 152.7 62.2
C21 C22 H221 C24 239.4 125.9
C21 C22 H221 H222 119.7 242.6
C24 C22 H221 H222 240.3 116.7
H221 C22 C24 C23 303.6 53.6
H221 C22 C24 H241 63.6 293.2
H221 C22 C24 H242 193.3 177.8
H222 C22 C21 H211 33.5 186.6
H222 C22 C21 H212 273.1 305.4
C21 C22 H222 C24 120.4 237.1
C21 C22 H222 H221 240.2 118.4
C24 C22 H222 H221 119.8 241.3
H222 C22 C24 C23 183.3 170.2
H222 C22 C24 H241 303.3 49.8
H222 C22 C24 H242 72.9 294.5
C24 C23 C9 H91 136.8 49.2
C24 C23 C9 H92 16.8 169.8
C9 C23 C24 H231 120.0 238.8
C9 C23 C24 H232 240.0 120.7
C23 C24 C22 H221 303.6 53.6
C23 C24 C22 H222 183.3 170.2
C22 C24 C23 H241 120.0 239.5
C22 C24 C23 H242 249.6 123.6
H231 C23 C24 H232 120.0 241.9
H241 C24 C23 H242 129.7 244.1
H231 C23 C9 H91 256.8 288.4
H231 C23 C9 H92 136.8 48.9
C9 C23 H231 C24 240.1 122.3
C9 C23 H231 H232 120.1 242.1
C24 C23 H231 H232 240.0 119.9
H231 C23 C24 H241 202.5 45.9
H231 C23 C24 H242 72.9 161.8
H232 C23 C9 H91 16.8 171.1
H232 C23 C9 H92 256.8 291.6
C9 C23 H232 C24 120.0 237.6
C9 C23 H232 H231 240.0 118.6
C24 C23 H232 H231 120.0 241.1
H232 C23 C24 H241 82.5 164.0
H232 C23 C24 H242 312.9 279.9
H241 C24 C22 H221 63.6 293.2
H241 C24 C22 H222 303.3 49.8
C22 C24 H241 C23 225.3 123.4
C22 C24 H241 H242 112.6 242.4
H241 C24 C23 H231 202.5 45.9
H241 C24 C23 H232 82.5 164.0
C23 C24 H241 H242 247.3 119.0
H242 C24 C22 H221 193.3 177.8
H242 C24 C22 H222 72.9 294.5
C22 C24 H242 C23 130.7 234.3
C22 C24 H242 H241 245.4 116.9
H242 C24 C23 H231 72.9 161.8
H242 C24 C23 H232 312.9 279.9
C23 C24 H242 H241 114.7 242.6