PDB Chemical Component A06

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A06

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C6 1.391 1.382
C1 C2 1.388 1.382
C1 C14 1.476 1.506
C6 C5 1.391 1.382
C5 C4 1.394 1.383
C4 C3 1.392 1.384
C4 CL2 1.798 1.736
C3 C2 1.386 1.382
C8 C9 1.387 1.388
C8 C13 1.477 1.405
C8 N9 1.337 1.382
C9 C10 1.392 1.378
C10 C11 1.393 1.389
C11 C12 1.390 1.376
C11 CL1 1.789 1.736
C12 C13 1.385 1.397
C13 N14 1.349 1.359
N14 C15 1.357 1.301
C15 C16 1.510 1.506
C15 N9 1.351 1.360
C14 C16 1.523 1.530
C14 C17   1.531
C17 C18   1.507
C18 O1   1.342
C18 O2   1.208
C14 H14 1.100 1.090
C6 H6 1.080 1.080
C2 H2 1.080 1.080
C5 H5 1.080 1.081
C3 H3 1.080 1.079
C9 H9 1.080 1.080
N9 HA 1.000 0.970
C10 H10 1.080 1.080
C12 H12 1.080 1.080
C16 H161 1.100 1.090
C16 H162 1.100 1.090
C17 H171   1.090
C17 H172   1.090
O1 HO1   0.967

Bond Angles for A06

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 120.6 120.0
C6 C1 C14 120.7 120.0
C1 C6 C5 119.8 120.0
C1 C6 H6 120.1 120.0
C2 C1 C14 118.7 120.0
C1 C2 C3 119.7 120.1
C1 C2 H2 120.1 120.0
C1 C14 C16 107.2 109.5
C1 C14 C17   109.5
C1 C14 H14 113.9 109.5
C6 C5 C4 119.7 120.0
C5 C6 H6 120.1 120.0
C6 C5 H5 120.2 120.0
C5 C4 C3 120.2 120.0
C5 C4 CL2 120.5 120.0
C4 C5 H5 120.2 120.0
C3 C4 CL2 119.3 120.0
C4 C3 C2 120.1 119.9
C4 C3 H3 119.9 120.0
C3 C2 H2 120.2 120.0
C2 C3 H3 120.0 120.0
C9 C8 C13 119.5 120.0
C9 C8 N9 134.3 134.0
C8 C9 C10 119.1 119.8
C8 C9 H9 120.5 120.1
C13 C8 N9 106.1 106.0
C8 C13 C12 119.5 119.5
C8 C13 N14 106.2 106.9
C8 N9 C15 109.0 107.3
C8 N9 HA 125.5 126.3
C9 C10 C11 121.2 120.5
C10 C9 H9 120.5 120.1
C9 C10 H10 119.4 119.7
C10 C11 C12 121.7 120.5
C10 C11 CL1 119.4 119.8
C11 C10 H10 119.4 119.8
C12 C11 CL1 118.9 119.8
C11 C12 C13 119.0 119.8
C11 C12 H12 120.5 120.1
C12 C13 N14 134.3 133.6
C13 C12 H12 120.5 120.1
C13 N14 C15 108.2 109.7
N14 C15 C16 124.8 124.9
N14 C15 N9 110.4 110.1
C16 C15 N9 124.7 125.0
C15 C16 C14 107.7 109.5
C15 C16 H161 109.9 109.5
C15 C16 H162 109.9 109.5
C15 N9 HA 125.5 126.4
C16 C14 C17   109.5
C16 C14 H14 113.2 109.5
C14 C16 H161 109.9 109.5
C14 C16 H162 109.9 109.4
C14 C17 C18   109.5
C17 C14 H14   109.4
C14 C17 H171   109.4
C14 C17 H172   109.5
C17 C18 O1   120.0
C17 C18 O2   120.0
C18 C17 H171   109.5
C18 C17 H172   109.5
O1 C18 O2   120.0
C18 O1 HO1   117.0
H161 C16 H162 109.5 109.5
H171 C17 H172   109.5

Torsion Angles for A06

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 C14 179.7 180.3
C6 C1 C2 C3 0.3 0.0
C6 C1 C2 H2 180.2 180.0
C6 C1 C14 C16 146.0 240.0
C6 C1 C14 C17   120.0
C6 C1 C14 H14 272.0 0.1
C1 C6 C5 C4 0.0 0.0
C5 C6 C1 H6 180.0 180.0
C1 C6 C5 H5 180.0 179.9
C6 C1 C2 C14 180.3 179.7
C2 C1 C6 C5 359.8 0.0
C2 C1 C6 H6 179.8 180.0
C2 C1 C14 C16 326.3 59.7
C2 C1 C14 C17   299.7
C2 C1 C14 H14 92.3 179.8
C4 C3 C2 C1 359.8 359.9
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 H3 179.8 180.0
C6 C1 C14 C2 179.7 180.3
C14 C1 C6 C5 180.1 179.7
C14 C1 C6 H6 0.1 359.7
C14 C1 C2 C3 179.9 180.3
C14 C1 C2 H2 359.9 0.3
C15 C16 C14 C1 293.9 174.2
C16 C14 C1 C17   120.0
C16 C14 C1 H14 234.0 240.0
C1 C14 C16 H161 174.2 54.1
C1 C14 C16 H162 53.6 294.2
C1 C14 C17 C18   294.3
C17 C14 C1 H14   119.9
C1 C14 C17 H171   54.3
C1 C14 C17 H172   174.3
C5 C6 C1 C2 359.8 0.0
C5 C6 C1 C14 180.1 179.7
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 C3 0.1 359.9
C6 C5 C4 CL2 180.2 180.0
C4 C5 C6 H5 180.0 180.1
C4 C5 C6 H6 180.0 180.0
C6 C5 C4 H5 180.0 179.9
C3 C4 C5 CL2 179.9 180.0
C5 C4 C3 C2 0.0 0.1
C5 C4 C3 H3 180.0 180.0
C1 C2 C3 C4 359.8 359.9
C5 C4 C3 CL2 180.1 180.0
C3 C4 C5 H5 180.0 180.0
C4 C3 C2 H2 179.8 180.0
C2 C3 C4 H3 180.0 180.1
C5 C4 CL2 C3 179.9 180.0
CL2 C4 C5 H5 0.2 0.0
CL2 C4 C3 C2 179.9 180.1
CL2 C4 C3 H3 359.9 359.9
C3 C2 C1 C14 179.9 180.3
C1 C2 C3 H2 180.0 180.0
C2 C3 C4 CL2 179.9 180.1
C4 C3 C2 H3 180.0 179.9
C13 C8 C9 N9 179.9 180.3
C9 C8 C13 C12 0.3 0.0
C9 C8 C13 N14 180.2 180.0
C9 C8 N9 C15 179.5 179.9
C9 C8 N9 HA 359.5 0.0
C8 C9 C10 C11 360.0 0.1
C10 C9 C8 H9 180.0 179.9
C8 C9 C10 H10 179.9 179.9
C9 C8 C13 N9 180.1 179.8
C13 C8 C9 C10 359.7 360.0
C13 C8 C9 H9 179.7 180.0
C13 C8 N9 C15 359.6 359.6
C13 C8 N9 HA 179.6 179.7
C11 C12 C13 C8 360.0 0.0
C12 C13 C8 N14 180.2 180.0
C8 C13 C12 H12 179.9 180.0
C8 C13 N14 C15 0.3 0.0
C9 C8 N9 C13 179.9 180.3
N9 C8 C9 C10 179.8 179.6
N9 C8 C9 H9 359.8 359.7
N9 C8 C13 C12 180.2 180.3
N9 C8 C13 N14 0.1 0.2
N14 C15 N9 C8 0.6 0.4
C16 C15 N9 C8 179.8 180.1
C15 N9 C8 HA 180.0 179.9
C10 C9 C8 C13 359.7 360.0
C10 C9 C8 N9 179.8 179.6
C8 C9 C10 H9 180.0 180.1
C9 C10 C11 C12 0.3 360.0
C9 C10 C11 CL1 180.2 179.9
C11 C10 C9 H10 180.0 180.1
C11 C10 C9 H9 180.0 180.0
C9 C10 C11 H10 180.0 179.9
C12 C11 C10 CL1 180.1 180.0
C10 C11 C12 C13 359.7 0.0
C10 C11 C12 H12 179.7 180.0
C8 C13 C12 C11 360.0 0.0
C10 C11 C12 CL1 179.9 180.0
C12 C11 C10 H10 180.4 180.1
C11 C12 C13 N14 180.2 180.0
C13 C12 C11 H12 180.0 180.0
C10 C11 CL1 C12 180.1 180.0
CL1 C11 C10 H10 0.2 0.0
CL1 C11 C12 C13 179.8 180.0
CL1 C11 C12 H12 359.8 0.0
C12 C13 C8 N9 180.2 180.3
C8 C13 C12 N14 179.8 180.0
C13 C12 C11 CL1 179.8 180.0
C11 C12 C13 H12 180.0 180.0
C12 C13 N14 C15 180.1 180.0
N14 C13 C8 N9 0.1 0.2
C8 C13 N14 C12 180.2 180.0
N14 C13 C12 H12 0.2 0.0
C13 N14 C15 C16 180.3 180.0
C13 N14 C15 N9 359.4 359.7
C8 N9 C15 N14 0.6 0.4
C16 C15 N14 N9 180.8 180.3
N14 C15 C16 C14 134.1 303.1
N14 C15 C16 H161 253.8 63.1
N14 C15 C16 H162 14.4 183.2
N14 C15 N9 HA 180.6 180.3
C1 C14 C16 C15 293.9 174.2
C8 N9 C15 C16 179.8 180.1
N14 C15 C16 N9 179.0 179.6
C16 C15 N9 HA 359.8 0.0
C15 C16 C14 C17   294.2
C15 C16 C14 H14 167.5 54.2
C14 C16 C15 H161 240.3 240.0
C14 C16 C15 H162 119.7 120.0
H161 C16 C15 H162 239.4 240.0
C8 N9 C15 HA 180.0 180.1
N14 C15 N9 C16 180.8 180.3
N9 C15 C16 C14 315.1 123.5
N9 C15 C16 H161 74.8 243.5
N9 C15 C16 H162 195.4 3.5
C1 C14 C16 C17   240.0
C1 C14 C16 H14 126.4 120.0
C14 C16 C15 N9 315.1 123.5
C15 C16 C14 H161 119.7 120.1
C15 C16 C14 H162 240.3 240.0
C16 C14 C17 C18   174.2
C17 C14 C16 H14   240.1
C16 C14 C17 H171   294.2
C16 C14 C17 H172   54.2
H161 C16 C14 H162 120.6 120.0
C1 C14 C17 C16   120.1
C1 C14 C17 H14   240.0
C16 C14 C17 H14   120.0
C17 C14 C16 H161   174.2
C17 C14 C16 H162   54.2
C14 C17 C18 O1   174.1
C14 C17 C18 O2   354.0
C18 C17 C14 H171   240.0
C18 C17 C14 H172   120.0
H171 C17 C14 H172   240.0
C18 C17 C14 H14   54.3
C14 C17 C18 H171   119.9
C14 C17 C18 H172   240.0
O1 C18 C17 O2   180.0
C17 C18 O1 HO1   180.0
H171 C17 C18 H172   120.0
C17 C18 O1 O2   180.0
O1 C18 C17 H171   54.1
O1 C18 C17 H172   294.1
C17 C18 O2 O1   180.0
O2 C18 C17 H171   234.1
O2 C18 C17 H172   114.0
O2 C18 O1 HO1   0.0
C1 C14 H14 C16 237.2 239.9
C1 C14 H14 C17   120.0
C16 C14 H14 C17   240.0
H14 C14 C16 H161 47.8 294.1
H14 C14 C16 H162 287.2 174.1
H14 C14 C17 C18   54.3
H14 C14 C17 H171   174.2
H14 C14 C17 H172   294.2
H6 C6 C1 C2 179.8 180.0
H6 C6 C1 C14 0.1 359.7
C1 C6 H6 C5 180.0 180.0
H6 C6 C5 C4 180.0 180.0
H6 C6 C5 H5 0.0 360.0
H2 C2 C1 C14 359.9 0.3
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 H3 359.8 0.1
C6 C5 H5 C4 180.0 180.1
H5 C5 C6 H6 0.0 360.0
H5 C5 C4 C3 180.0 180.0
H5 C5 C4 CL2 0.2 0.0
H3 C3 C4 CL2 359.9 359.9
C4 C3 H3 C2 180.0 180.1
H3 C3 C2 H2 359.8 0.1
H9 C9 C8 C13 179.7 180.0
H9 C9 C8 N9 359.8 359.7
C8 C9 H9 C10 180.0 179.9
H9 C9 C10 C11 180.0 180.0
H9 C9 C10 H10 360.0 359.9
C8 N9 HA C15 180.0 179.9
C9 C10 H10 C11 180.0 180.1
H10 C10 C9 H9 360.0 359.9
H10 C10 C11 C12 180.4 180.1
H10 C10 C11 CL1 0.2 0.0
H12 C12 C11 CL1 359.8 0.0
C11 C12 H12 C13 180.0 180.0
H12 C12 C13 N14 0.2 0.0
H161 C16 C15 N9 74.8 243.5
C15 C16 H161 C14 241.7 240.0
C15 C16 H161 H162 120.8 120.0
H161 C16 C14 C17   174.2
H161 C16 C14 H14 47.8 294.1
C14 C16 H161 H162 239.2 240.1
H162 C16 C15 N9 195.4 3.5
C15 C16 H162 C14 118.3 120.0
C15 C16 H162 H161 239.2 239.9
H162 C16 C14 C17   54.2
H162 C16 C14 H14 287.2 174.1
C14 C16 H162 H161 120.8 120.0
C14 C17 H171 C18   240.0
H171 C17 C14 H14   174.2
C14 C17 H171 H172   120.0
H171 C17 C18 O1   54.1
H171 C17 C18 O2   234.1
C18 C17 H171 H172   240.0
C14 C17 H172 C18   120.0
H172 C17 C14 H14   294.2
C14 C17 H172 H171   240.0
H172 C17 C18 O1   294.1
H172 C17 C18 O2   114.0
C18 C17 H172 H171   120.0
HO1 O1 C18 O2   0.0