PDB Chemical Component 9ZY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9ZY
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O3 |
C13 |
1.223 |
1.215 |
| O2 |
C13 |
1.292 |
1.347 |
| C13 |
C9 |
1.496 |
1.477 |
| C16 |
C15 |
1.385 |
1.380 |
| C16 |
C17 |
1.378 |
1.383 |
| C9 |
C8 |
1.401 |
1.395 |
| C9 |
C10 |
1.393 |
1.398 |
| C15 |
C14 |
1.389 |
1.394 |
| C17 |
C18 |
1.376 |
1.383 |
| CL |
C10 |
1.731 |
1.736 |
| C8 |
C7 |
1.398 |
1.385 |
| C10 |
C11 |
1.388 |
1.382 |
| N |
C6 |
1.331 |
1.313 |
| N |
N1 |
1.382 |
1.397 |
| C14 |
C6 |
1.480 |
1.482 |
| C14 |
C19 |
1.395 |
1.394 |
| C18 |
C19 |
1.383 |
1.380 |
| C7 |
N1 |
1.431 |
1.402 |
| C7 |
C12 |
1.397 |
1.390 |
| C6 |
C5 |
1.426 |
1.466 |
| C11 |
C12 |
1.380 |
1.382 |
| N1 |
C4 |
1.360 |
1.358 |
| C5 |
C4 |
1.369 |
1.393 |
| C5 |
C1 |
1.442 |
1.412 |
| C4 |
O1 |
1.366 |
1.346 |
| O1 |
C3 |
1.422 |
1.344 |
| C1 |
C |
1.501 |
1.507 |
| C1 |
C2 |
1.360 |
1.361 |
| C3 |
C2 |
1.444 |
1.407 |
| C3 |
O |
1.206 |
1.218 |
| C8 |
H1 |
1.080 |
1.080 |
| C11 |
H2 |
1.080 |
1.079 |
| C12 |
H3 |
1.080 |
1.080 |
| C15 |
H4 |
1.080 |
1.080 |
| O2 |
H5 |
0.950 |
0.967 |
| C2 |
H6 |
1.080 |
1.080 |
| C |
H7 |
1.100 |
1.090 |
| C |
H8 |
1.100 |
1.090 |
| C |
H9 |
1.100 |
1.090 |
| C19 |
H10 |
1.080 |
1.080 |
| C18 |
H11 |
1.080 |
1.079 |
| C17 |
H12 |
1.080 |
1.081 |
| C16 |
H13 |
1.080 |
1.080 |
Bond Angles for 9ZY
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O3 |
C13 |
C9 |
121.7 |
120.0 |
| C16 |
C15 |
H4 |
119.9 |
120.0 |
| C16 |
C17 |
H12 |
120.0 |
119.9 |
| C9 |
C8 |
H1 |
119.6 |
120.1 |
| C9 |
C10 |
C11 |
121.5 |
119.9 |
| C15 |
C14 |
C19 |
118.7 |
119.8 |
| C17 |
C18 |
H11 |
119.9 |
120.0 |
| C8 |
C7 |
C12 |
119.6 |
120.1 |
| C10 |
C11 |
C12 |
120.0 |
120.2 |
| C10 |
C11 |
H2 |
120.1 |
119.9 |
| C14 |
C19 |
H10 |
119.7 |
120.1 |
| C18 |
C19 |
H10 |
119.8 |
120.1 |
| C7 |
C12 |
C11 |
120.0 |
120.3 |
| C7 |
C12 |
H3 |
120.0 |
119.9 |
| C6 |
C5 |
C1 |
140.4 |
133.6 |
| C12 |
C11 |
H2 |
120.0 |
119.9 |
| C11 |
C12 |
H3 |
120.0 |
119.8 |
| N1 |
C4 |
O1 |
122.8 |
132.9 |
| C5 |
C4 |
O1 |
127.8 |
120.0 |
| C5 |
C1 |
C |
121.3 |
120.6 |
| C5 |
C1 |
C2 |
119.0 |
118.8 |
| C4 |
O1 |
C3 |
116.5 |
121.0 |
| O1 |
C3 |
C2 |
117.5 |
120.9 |
| O1 |
C3 |
O |
116.6 |
119.6 |
| C1 |
C |
H7 |
109.5 |
109.4 |
| C1 |
C |
H8 |
109.5 |
109.4 |
| C1 |
C |
H9 |
109.5 |
109.5 |
| C1 |
C2 |
H6 |
118.4 |
120.2 |
| O |
C3 |
C2 |
125.9 |
119.6 |
| C3 |
C2 |
H6 |
118.5 |
120.2 |
| H7 |
C |
H8 |
109.5 |
109.5 |
| H7 |
C |
H9 |
109.4 |
109.5 |
| H8 |
C |
H9 |
109.5 |
109.5 |
Torsion Angles for 9ZY
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
C9 |
C8 |
H1 |
354.3 |
360.0 |
| C17 |
C16 |
C15 |
H4 |
178.3 |
180.0 |
| C16 |
C17 |
C18 |
H11 |
180.5 |
180.3 |
| O3 |
C13 |
C9 |
C8 |
275.8 |
180.0 |
| C9 |
C8 |
C7 |
C12 |
0.8 |
0.3 |
| O3 |
C13 |
C9 |
C10 |
90.9 |
360.0 |
| C10 |
C9 |
C8 |
H1 |
178.9 |
180.0 |
| C9 |
C10 |
C11 |
C12 |
0.2 |
359.7 |
| C9 |
C10 |
C11 |
H2 |
180.3 |
179.9 |
| C15 |
C14 |
C19 |
H10 |
179.5 |
179.7 |
| C17 |
C18 |
C19 |
H10 |
179.4 |
180.0 |
| CL |
C10 |
C11 |
H2 |
359.6 |
0.0 |
| C8 |
C7 |
C12 |
C11 |
360.0 |
359.4 |
| C8 |
C7 |
C12 |
H3 |
179.9 |
179.7 |
| C7 |
C12 |
C11 |
C10 |
359.5 |
0.6 |
| C12 |
C11 |
C10 |
H2 |
180.0 |
179.7 |
| C10 |
C11 |
C12 |
H3 |
179.5 |
180.3 |
| N |
C6 |
C5 |
C1 |
182.0 |
179.9 |
| C14 |
C6 |
C5 |
C1 |
6.3 |
359.9 |
| C18 |
C19 |
C14 |
H10 |
180.0 |
179.9 |
| C14 |
C19 |
C18 |
H10 |
180.0 |
180.1 |
| C7 |
N1 |
C4 |
O1 |
1.0 |
360.0 |
| C10 |
C11 |
C12 |
C7 |
359.5 |
0.6 |
| C7 |
C12 |
C11 |
H2 |
179.5 |
180.3 |
| C11 |
C12 |
C7 |
H3 |
180.0 |
179.6 |
| C6 |
C5 |
C4 |
O1 |
178.2 |
180.0 |
| C6 |
C5 |
C1 |
C |
359.5 |
0.0 |
| C6 |
C5 |
C1 |
C2 |
178.2 |
180.0 |
| C10 |
C11 |
C12 |
H2 |
180.0 |
180.3 |
| C7 |
C12 |
C11 |
H3 |
180.0 |
180.4 |
| C5 |
C4 |
N1 |
O1 |
179.5 |
180.3 |
| N1 |
C4 |
O1 |
C3 |
183.4 |
180.3 |
| N1 |
C4 |
C5 |
O1 |
180.5 |
179.7 |
| C5 |
C4 |
O1 |
C3 |
4.0 |
360.0 |
| C1 |
C5 |
C4 |
O1 |
357.6 |
0.1 |
| C5 |
C1 |
C |
H7 |
180.0 |
84.9 |
| C5 |
C1 |
C |
H8 |
300.0 |
204.9 |
| C5 |
C1 |
C |
H9 |
60.0 |
324.9 |
| C5 |
C1 |
C2 |
H6 |
182.2 |
180.1 |
| C4 |
O1 |
C3 |
C2 |
357.6 |
0.0 |
| C4 |
O1 |
C3 |
O |
179.4 |
180.0 |
| O |
C3 |
O1 |
C2 |
181.8 |
180.0 |
| O1 |
C3 |
C2 |
H6 |
179.5 |
180.0 |
| C5 |
C1 |
C |
C2 |
178.7 |
180.0 |
| C |
C1 |
C2 |
H6 |
0.9 |
0.0 |
| H7 |
C |
C1 |
H8 |
240.0 |
240.0 |
| H7 |
C |
C1 |
H9 |
120.0 |
120.0 |
| H8 |
C |
C1 |
H9 |
240.0 |
240.0 |
| C5 |
C1 |
C2 |
C |
181.3 |
180.0 |
| C3 |
C2 |
C1 |
H6 |
180.0 |
180.0 |
| C5 |
C1 |
C2 |
C3 |
2.2 |
0.1 |
| O1 |
C3 |
C2 |
O |
181.9 |
180.0 |
| C1 |
C2 |
C3 |
H6 |
180.0 |
180.0 |
| O1 |
C3 |
O |
C2 |
178.1 |
180.0 |
| O |
C3 |
C2 |
H6 |
357.5 |
360.0 |
| H1 |
C8 |
C7 |
C12 |
180.8 |
180.3 |
| C10 |
C11 |
H2 |
C12 |
180.0 |
179.7 |
| H2 |
C11 |
C12 |
H3 |
359.5 |
360.0 |
| C7 |
C12 |
H3 |
C11 |
180.0 |
179.6 |
| H3 |
C12 |
C11 |
H2 |
359.5 |
360.0 |
| H4 |
C15 |
C14 |
C19 |
181.6 |
180.3 |
| C1 |
C |
H7 |
H8 |
120.0 |
119.9 |
| C1 |
C |
H7 |
H9 |
240.0 |
240.0 |
| H8 |
C |
H7 |
H9 |
120.0 |
120.1 |
| C1 |
C |
H8 |
H7 |
240.0 |
240.0 |
| C1 |
C |
H8 |
H9 |
120.0 |
120.0 |
| H7 |
C |
H8 |
H9 |
240.0 |
240.0 |
| C1 |
C |
H9 |
H7 |
120.0 |
120.0 |
| C1 |
C |
H9 |
H8 |
240.0 |
240.0 |
| H7 |
C |
H9 |
H8 |
120.0 |
120.0 |
| H11 |
C18 |
C19 |
H10 |
359.5 |
359.9 |
| H12 |
C17 |
C18 |
H11 |
0.5 |
360.0 |
| H13 |
C16 |
C15 |
H4 |
358.3 |
359.9 |
| H13 |
C16 |
C17 |
H12 |
0.6 |
0.2 |