PDB Chemical Component 9YW

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9YW

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O12	C10	1.255	1.208
C10	O11	1.254	1.342
C10	C09	1.530	1.507
C09	O1	1.402	1.429
O1	C1	1.403	1.429
O5	C5	1.464	1.429
O5	C1	1.457	1.429
C5	C6	1.535	1.530
C5	C4	1.542	1.531
C6	O6	1.406	1.429
C1	C2	1.525	1.530
O4	C4	1.405	1.429
C4	C3	1.475	1.531
C3	C2	1.463	1.532
C3	O3	1.405	1.429
C2	O2	1.405	1.429
C6	H61	1.100	1.090
C6	H62	1.100	1.090
C5	H5	1.100	1.090
C4	H4	1.100	1.090
C3	H3	1.100	1.090
C2	H2	1.100	1.090
C1	H1	1.100	1.090
C09	H8	1.100	1.090
C09	H9	1.100	1.090
O11	H10	0.950	0.968
O2	HO2	0.950	0.967
O3	HO3	0.950	0.966
O4	HO4	0.951	0.966
O6	HO6	0.950	0.967

Bond Angles for 9YW

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C09	C10	O11	119.9	120.0
C10	O11	H10	109.5	117.0
C10	C09	O1	107.0	109.4
C10	C09	H8	110.1	109.4
C10	C09	H9	110.1	109.5
O1	C09	H8	110.1	109.5
O1	C09	H9	110.1	109.5
O1	C1	H1	110.8	109.4
O5	C5	H5	108.9	109.5
O5	C1	H1	110.0	109.5
C5	C6	O6	108.1	109.5
C5	C6	H61	109.8	109.5
C5	C6	H62	109.8	109.5
C5	C4	C3	114.6	109.2
C4	C5	H5	108.0	109.5
C5	C4	H4	107.0	109.5
O6	C6	H61	109.8	109.4
O6	C6	H62	109.8	109.5
C6	O6	HO6	109.5	114.1
C1	C2	O2	110.6	109.5
C1	C2	H2	107.7	109.5
O4	C4	H4	108.7	109.6
C4	C3	C2	111.1	109.1
C4	C3	O3	110.8	109.5
C3	C4	H4	107.8	109.5
C4	C3	H3	107.9	109.5
C2	C3	O3	110.0	109.6
C3	C2	O2	111.5	109.6
C2	C3	H3	108.1	109.5
C3	C2	H2	108.5	109.5
O3	C3	H3	108.9	109.6
C3	O3	HO3	109.5	114.0
O2	C2	H2	109.3	109.5
C2	O2	HO2	109.5	114.0
H61	C6	H62	109.4	109.4
H8	C09	H9	109.5	109.5

Torsion Angles for 9YW

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O12	C10	O11	H10	360.0	0.3
O12	C10	C09	H8	302.0	119.7
O12	C10	C09	H9	62.8	239.7
O11	C10	C09	O1	2.7	180.1
O11	C10	C09	H8	122.3	300.1
O11	C10	C09	H9	243.1	60.1
C09	C10	O11	H10	179.7	180.0
O1	C09	C10	H8	240.4	240.0
O1	C09	C10	H9	119.6	120.0
H8	C09	C10	H9	239.2	240.0
O1	C09	C10	O11	2.7	180.1
C10	C09	O1	H8	119.6	120.0
C10	C09	O1	H9	240.4	240.0
C09	O1	C1	H1	308.3	310.0
H8	C09	O1	H9	120.8	120.1
C10	C09	O1	C1	207.1	180.0
O5	C1	O1	H1	120.8	120.0
O1	C1	C2	O2	67.9	57.5
O1	C1	C2	H2	187.2	177.6
O5	C5	C6	O6	291.3	65.0
O5	C5	C6	H61	51.1	185.0
O5	C5	C6	H62	171.5	305.0
C4	C5	O5	H5	121.9	120.0
O5	C5	C4	H4	84.1	62.3
O1	C1	O5	H1	238.7	240.1
C1	O5	C5	H5	275.6	301.1
O5	C1	C2	O2	186.2	177.5
O5	C1	C2	H2	305.6	297.6
O6	C6	C5	H61	240.2	240.0
O6	C6	C5	H62	119.8	120.0
C5	C6	O6	HO6	180.0	180.0
H61	C6	C5	H62	239.6	240.0
O5	C5	C4	H5	237.6	240.0
C4	C5	C6	O6	57.1	185.0
C4	C5	C6	H61	176.9	305.0
C4	C5	C6	H62	297.3	65.0
O4	C4	C5	H4	117.2	120.2
C5	C4	C3	C2	47.2	56.9
C5	C4	C3	O3	169.8	176.8
C3	C4	C5	H4	240.6	240.1
C5	C4	C3	H3	288.9	297.1
C5	C6	O6	H61	119.8	120.1
C5	C6	O6	H62	240.2	240.0
H61	C6	O6	H62	120.4	119.9
C1	C2	C3	O3	176.4	183.2
C3	C2	C1	O2	236.9	240.0
C1	C2	C3	H3	57.6	62.9
C3	C2	C1	H2	117.6	119.9
O2	C2	C1	H2	240.7	239.9
C1	C2	O2	HO2	180.0	60.3
O4	C4	C5	H5	323.7	302.5
C5	C4	O4	H4	243.9	239.9
C3	C4	O4	H4	117.8	120.2
O4	C4	C3	H3	51.5	57.1
C3	C4	C5	H5	87.1	62.5
C5	C4	C3	H4	119.0	119.8
O4	C4	C3	H4	241.6	239.8
C2	C3	C4	O3	237.4	240.1
C4	C3	C2	O2	176.9	183.1
C2	C3	C4	H3	118.3	119.8
C4	C3	C2	H2	56.5	63.0
O3	C3	C4	H3	240.9	239.7
C4	C3	O3	HO3	180.0	179.9
C1	C2	C3	O2	122.5	119.9
C1	C2	C3	H2	242.9	240.1
C4	C3	C2	O3	123.0	119.9
C2	C3	C4	H4	288.2	297.1
C4	C3	C2	H3	241.8	240.1
O3	C3	C2	H3	118.8	120.2
C2	C3	O3	HO3	303.2	299.5
O2	C2	C3	H2	120.4	120.1
C3	C2	O2	HO2	301.7	180.0
C4	C3	O3	C2	236.8	240.4
O3	C3	C4	H4	50.8	57.0
C4	C3	O3	H3	118.5	120.2
O3	C3	C2	O2	53.9	63.2
C2	C3	O3	H3	241.7	239.8
O3	C3	C2	H2	293.5	303.1
C1	C2	O2	H2	118.4	120.1
O2	C2	C3	O3	53.9	63.2
O2	C2	C3	H3	295.1	303.0
C3	C2	O2	H2	240.0	239.9
C5	C6	H61	O6	241.3	240.0
C5	C6	H61	H62	120.6	120.0
O6	C6	H61	H62	239.3	240.1
H61	C6	O6	HO6	60.2	59.9
C5	C6	H62	O6	118.7	120.0
C5	C6	H62	H61	239.4	240.0
O6	C6	H62	H61	120.7	119.9
H62	C6	O6	HO6	299.8	300.0
H5	C5	C6	O6	174.4	305.0
H5	C5	C6	H61	294.2	65.0
H5	C5	C6	H62	54.6	185.0
H5	C5	C4	C3	87.1	62.5
H5	C5	C4	H4	206.5	182.3
C5	C4	H4	C3	236.3	240.4
H4	C4	C5	H5	206.5	182.3
H4	C4	C3	C2	288.2	297.1
H4	C4	C3	O3	50.8	57.0
H4	C4	C3	H3	169.9	177.3
C4	C3	H3	C2	120.2	119.6
C4	C3	H3	O3	239.7	239.8
H3	C3	C4	H4	169.9	177.3
C2	C3	H3	O3	119.5	120.2
H3	C3	C2	O2	295.1	303.0
H3	C3	C2	H2	174.7	182.9
H3	C3	O3	HO3	61.5	59.7
C1	C2	H2	O2	239.8	239.9
H2	C2	C3	O3	293.5	303.1
C3	C2	H2	O2	121.8	120.1
H2	C2	C3	H3	174.7	182.9
H2	C2	O2	HO2	61.7	300.2
H1	C1	C2	O2	307.7	297.5
H1	C1	C2	H2	67.0	57.7
H8	C09	C10	O11	122.3	300.1
C10	C09	H8	O1	242.3	240.0
C10	C09	H8	H9	121.1	120.0
O1	C09	H8	H9	238.8	240.0
H9	C09	C10	O11	243.1	60.1
C10	C09	H9	O1	117.7	120.0
C10	C09	H9	H8	238.8	240.0
O1	C09	H9	H8	121.1	120.1
HO2	O2	C2	H2	61.7	300.2
HO3	O3	C3	H3	61.5	59.7
HO4	O4	C4	H4	296.1	300.1
HO6	O6	C6	H61	60.2	59.9
HO6	O6	C6	H62	299.8	300.0