PDB Chemical Component 9XZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9XZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C4 1.372 1.331
C1 C6 1.427 1.393
C2 C7 1.377 1.397
C2 C8 1.382 1.392
C3 C7 1.383 1.392
C3 N12 1.337 1.318
C4 S18 1.705 1.757
C5 C6 1.381 1.345
C5 S18 1.715 1.758
C6 C7 1.448 1.485
C8 C9 1.394 1.402
C8 C10 1.436 1.484
C9 N12 1.341 1.323
C9 N17 1.401 1.388
C10 N13 1.375 1.341
C10 N14 1.340 1.318
C11 N16 1.460 1.465
N13 N15 1.316 1.291
N14 N16 1.333 1.289
N15 N16 1.346 1.287
C1 H1 1.080 1.080
C4 H4 1.080 1.080
C2 H2 1.080 1.080
C3 H3 1.080 1.080
C5 H5 1.081 1.079
N17 H171 1.000 0.971
N17 H172 1.000 0.970
C11 H111 1.100 1.090
C11 H112 1.100 1.090
C11 H113 1.100 1.090

Bond Angles for 9XZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 C1 C6 113.7 114.9
C1 C4 S18 110.8 109.9
C4 C1 H1 123.1 122.5
C1 C4 H4 124.6 125.0
C1 C6 C5 111.1 114.5
C1 C6 C7 124.0 122.7
C6 C1 H1 123.2 122.6
C7 C2 C8 120.8 118.3
C2 C7 C3 116.5 119.2
C2 C7 C6 118.9 120.4
C7 C2 H2 119.6 120.8
C2 C8 C9 118.4 119.0
C2 C8 C10 116.3 120.5
C8 C2 H2 119.6 120.9
C7 C3 N12 124.6 121.0
C3 C7 C6 124.6 120.4
C7 C3 H3 117.7 119.5
C3 N12 C9 117.9 121.9
N12 C3 H3 117.7 119.5
C4 S18 C5 92.7 91.2
S18 C4 H4 124.6 125.1
C6 C5 S18 111.7 109.5
C5 C6 C7 125.0 122.7
C6 C5 H5 124.2 125.2
S18 C5 H5 124.2 125.3
C9 C8 C10 125.3 120.5
C8 C9 N12 121.8 120.7
C8 C9 N17 120.8 119.7
C8 C10 N13 125.2 126.6
C8 C10 N14 121.2 126.7
N12 C9 N17 117.4 119.7
C9 N17 H171 109.5 120.0
C9 N17 H172 109.5 120.0
N13 C10 N14 113.5 106.7
C10 N13 N15 106.4 107.2
C10 N14 N16 99.2 107.8
C11 N16 N14 120.6 125.3
C11 N16 N15 122.7 125.4
N16 C11 H111 109.5 109.4
N16 C11 H112 109.4 109.4
N16 C11 H113 109.5 109.5
N13 N15 N16 104.3 109.0
N14 N16 N15 116.7 109.3
H171 N17 H172 109.5 120.0
H111 C11 H112 109.5 109.5
H111 C11 H113 109.4 109.5
H112 C11 H113 109.5 109.5

Torsion Angles for 9XZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C1 C6 C5 0.1 0.0
C4 C1 C6 C7 179.3 179.9
C6 C1 C4 H1 180.0 180.3
C1 C4 S18 C5 359.8 360.0
S18 C4 C1 H4 180.0 180.0
C6 C1 C4 S18 0.1 360.0
C4 C1 C6 H1 180.0 179.7
C6 C1 C4 H4 180.1 179.9
C2 C7 C6 C1 30.7 180.0
C3 C7 C6 C1 213.5 0.0
C1 C6 C5 S18 359.7 360.0
C5 C6 C1 C7 180.9 180.1
C1 C6 C5 H5 179.7 180.0
C1 C6 C7 C2 30.7 180.0
C7 C2 C8 C9 0.6 -0.0
C7 C2 C8 C10 181.6 180.0
C8 C2 C7 H2 180.0 180.3
C2 C7 C3 N12 0.3 360.0
C3 C7 C2 C6 177.4 180.0
C2 C7 C3 H3 180.3 180.0
C5 C6 C7 C2 209.7 359.9
C8 C2 C7 C3 359.1 0.0
C8 C2 C7 C6 181.7 180.0
C7 C2 C8 H2 180.0 179.7
C9 C8 C2 C10 179.0 180.0
C2 C8 C9 N12 0.3 359.9
C2 C8 C9 N17 180.1 180.0
C2 C8 C10 N13 196.5 360.0
C2 C8 C10 N14 19.3 179.7
C1 C6 C7 C3 213.5 0.0
C3 C7 C2 C8 359.1 0.0
C2 C7 C3 C6 182.7 180.0
C3 C7 C2 H2 179.1 179.7
C7 C3 N12 C9 0.6 360.0
N12 C3 C7 H3 180.0 180.0
C5 C6 C7 C3 32.5 179.9
N12 C3 C7 C6 177.6 180.0
C7 C3 N12 H3 180.0 180.0
C8 C9 N12 C3 359.1 0.1
C3 N12 C9 N17 179.3 180.0
S18 C4 C1 C6 0.1 360.0
S18 C4 C1 H1 180.1 179.7
C1 C4 S18 H4 180.0 180.0
C6 C5 S18 C4 0.3 0.0
C4 S18 C5 H5 180.3 180.0
C1 C6 C5 C7 179.1 179.9
C5 C6 C1 H1 180.1 180.3
C2 C7 C6 C5 209.7 359.9
C3 C7 C6 C5 32.5 179.9
C4 S18 C5 C6 0.3 0.0
S18 C5 C6 H5 180.0 180.0
C5 S18 C4 H4 179.8 180.0
S18 C5 C6 C7 180.6 180.0
C6 C5 S18 H5 180.0 180.0
C1 C6 C7 C5 181.0 180.1
C7 C6 C1 H1 359.3 0.2
C6 C7 C2 C8 181.7 180.0
C2 C7 C6 C3 177.2 180.0
C6 C7 C2 H2 1.7 359.7
C6 C7 C3 N12 177.6 180.0
C6 C7 C3 H3 357.6 0.0
C7 C6 C5 S18 180.6 180.0
C7 C6 C5 H5 0.6 0.1
C2 C8 C9 C10 181.1 180.0
C9 C8 C2 H2 180.6 180.3
C3 N12 C9 C8 359.1 0.1
C9 C8 C10 N13 17.5 180.0
C9 C8 C10 N14 200.3 359.7
N12 C9 C8 N17 180.2 179.9
C8 C9 N17 H171 180.2 -0.0
C8 C9 N17 H172 300.3 179.9
C2 C8 C10 C9 178.9 180.0
C10 C8 C2 H2 1.6 0.3
C10 C8 C9 N12 179.2 180.0
C10 C8 C9 N17 359.0 0.0
N13 C10 C8 N14 177.2 180.3
C8 C10 N13 N15 182.3 180.0
C8 C10 N14 N16 178.0 180.0
C9 N12 C3 H3 180.6 179.9
N12 C9 C8 C10 179.2 180.0
C8 C9 N12 N17 179.8 180.1
N12 C9 N17 H171 360.0 180.0
N12 C9 N17 H172 120.0 360.0
N17 C9 C8 C10 359.0 0.0
C8 C9 N17 N12 180.2 180.0
H171 N17 C9 H172 240.0 180.1
C8 C10 N13 N14 182.6 179.8
N13 C10 N14 N16 0.5 359.8
C10 N13 N15 N16 360.0 359.8
C8 C10 N14 N13 177.5 180.2
N14 C10 N13 N15 359.7 0.2
C11 N16 N14 C10 180.6 179.9
C10 N14 N16 N15 359.5 0.1
C10 N14 N16 C11 180.6 179.9
N13 N15 N16 C11 179.2 180.2
N14 N16 C11 N15 178.8 180.2
H111 C11 N16 H112 240.0 240.0
H111 C11 N16 H113 120.0 120.0
H112 C11 N16 H113 240.0 240.0
N15 N13 C10 N14 359.7 0.2
C11 N16 N15 N13 179.2 180.2
N14 N16 N15 N13 0.4 0.0
C11 N16 N14 N15 181.1 179.8
N14 N16 C11 H111 360.0 90.0
N14 N16 C11 H112 120.0 210.0
N14 N16 C11 H113 240.0 330.0
N13 N15 N16 N14 0.4 0.0
C11 N16 N15 N14 178.8 180.2
N15 N16 C11 H111 181.2 269.8
N15 N16 C11 H112 301.2 29.7
N15 N16 C11 H113 61.2 149.8
C4 C1 H1 C6 180.0 180.3
H1 C1 C4 S18 180.1 179.7
H1 C1 C4 H4 0.1 359.7
H1 C1 C6 C5 180.1 180.3
H1 C1 C6 C7 359.3 0.2
H4 C4 C1 C6 180.1 179.9
C1 C4 H4 S18 180.0 180.1
H4 C4 C1 H1 0.1 359.7
H4 C4 S18 C5 179.8 180.0
C7 C2 H2 C8 180.0 180.3
H2 C2 C7 C3 179.1 179.7
H2 C2 C7 C6 1.7 359.7
H2 C2 C8 C9 180.6 180.3
H2 C2 C8 C10 1.6 0.3
C7 C3 H3 N12 180.0 180.0
H3 C3 C7 C6 357.6 0.0
H3 C3 N12 C9 180.6 179.9
C6 C5 H5 S18 180.0 180.0
H5 C5 C6 C7 0.6 0.1
C9 N17 H171 H172 120.0 179.9
C9 N17 H172 H171 240.0 180.1
H111 C11 N16 N14 360.0 90.0
H111 C11 N16 N15 181.2 269.8
N16 C11 H111 H112 120.0 119.9
N16 C11 H111 H113 240.0 240.0
H112 C11 H111 H113 120.0 120.0
H112 C11 N16 N14 120.0 210.0
H112 C11 N16 N15 301.2 29.7
N16 C11 H112 H111 240.0 240.1
N16 C11 H112 H113 120.0 120.0
H111 C11 H112 H113 240.0 240.0
H113 C11 N16 N14 240.0 330.0
H113 C11 N16 N15 61.2 149.8
N16 C11 H113 H111 120.0 120.0
N16 C11 H113 H112 240.0 240.0
H111 C11 H113 H112 120.0 120.0