PDB Chemical Component 9XZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9XZ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C4 |
1.372 |
1.331 |
C1 |
C6 |
1.427 |
1.393 |
C2 |
C7 |
1.377 |
1.397 |
C2 |
C8 |
1.382 |
1.392 |
C3 |
C7 |
1.383 |
1.392 |
C3 |
N12 |
1.337 |
1.318 |
C4 |
S18 |
1.705 |
1.757 |
C5 |
C6 |
1.381 |
1.345 |
C5 |
S18 |
1.715 |
1.758 |
C6 |
C7 |
1.448 |
1.485 |
C8 |
C9 |
1.394 |
1.402 |
C8 |
C10 |
1.436 |
1.484 |
C9 |
N12 |
1.341 |
1.323 |
C9 |
N17 |
1.401 |
1.388 |
C10 |
N13 |
1.375 |
1.341 |
C10 |
N14 |
1.340 |
1.318 |
C11 |
N16 |
1.460 |
1.465 |
N13 |
N15 |
1.316 |
1.291 |
N14 |
N16 |
1.333 |
1.289 |
N15 |
N16 |
1.346 |
1.287 |
C1 |
H1 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
C5 |
H5 |
1.081 |
1.079 |
N17 |
H171 |
1.000 |
0.971 |
N17 |
H172 |
1.000 |
0.970 |
C11 |
H111 |
1.100 |
1.090 |
C11 |
H112 |
1.100 |
1.090 |
C11 |
H113 |
1.100 |
1.090 |
Bond Angles for 9XZ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
C1 |
C6 |
113.7 |
114.9 |
C1 |
C4 |
S18 |
110.8 |
109.9 |
C4 |
C1 |
H1 |
123.1 |
122.5 |
C1 |
C4 |
H4 |
124.6 |
125.0 |
C1 |
C6 |
C5 |
111.1 |
114.5 |
C1 |
C6 |
C7 |
124.0 |
122.7 |
C6 |
C1 |
H1 |
123.2 |
122.6 |
C7 |
C2 |
C8 |
120.8 |
118.3 |
C2 |
C7 |
C3 |
116.5 |
119.2 |
C2 |
C7 |
C6 |
118.9 |
120.4 |
C7 |
C2 |
H2 |
119.6 |
120.8 |
C2 |
C8 |
C9 |
118.4 |
119.0 |
C2 |
C8 |
C10 |
116.3 |
120.5 |
C8 |
C2 |
H2 |
119.6 |
120.9 |
C7 |
C3 |
N12 |
124.6 |
121.0 |
C3 |
C7 |
C6 |
124.6 |
120.4 |
C7 |
C3 |
H3 |
117.7 |
119.5 |
C3 |
N12 |
C9 |
117.9 |
121.9 |
N12 |
C3 |
H3 |
117.7 |
119.5 |
C4 |
S18 |
C5 |
92.7 |
91.2 |
S18 |
C4 |
H4 |
124.6 |
125.1 |
C6 |
C5 |
S18 |
111.7 |
109.5 |
C5 |
C6 |
C7 |
125.0 |
122.7 |
C6 |
C5 |
H5 |
124.2 |
125.2 |
S18 |
C5 |
H5 |
124.2 |
125.3 |
C9 |
C8 |
C10 |
125.3 |
120.5 |
C8 |
C9 |
N12 |
121.8 |
120.7 |
C8 |
C9 |
N17 |
120.8 |
119.7 |
C8 |
C10 |
N13 |
125.2 |
126.6 |
C8 |
C10 |
N14 |
121.2 |
126.7 |
N12 |
C9 |
N17 |
117.4 |
119.7 |
C9 |
N17 |
H171 |
109.5 |
120.0 |
C9 |
N17 |
H172 |
109.5 |
120.0 |
N13 |
C10 |
N14 |
113.5 |
106.7 |
C10 |
N13 |
N15 |
106.4 |
107.2 |
C10 |
N14 |
N16 |
99.2 |
107.8 |
C11 |
N16 |
N14 |
120.6 |
125.3 |
C11 |
N16 |
N15 |
122.7 |
125.4 |
N16 |
C11 |
H111 |
109.5 |
109.4 |
N16 |
C11 |
H112 |
109.4 |
109.4 |
N16 |
C11 |
H113 |
109.5 |
109.5 |
N13 |
N15 |
N16 |
104.3 |
109.0 |
N14 |
N16 |
N15 |
116.7 |
109.3 |
H171 |
N17 |
H172 |
109.5 |
120.0 |
H111 |
C11 |
H112 |
109.5 |
109.5 |
H111 |
C11 |
H113 |
109.4 |
109.5 |
H112 |
C11 |
H113 |
109.5 |
109.5 |
Torsion Angles for 9XZ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
C1 |
C6 |
C5 |
0.1 |
0.0 |
C4 |
C1 |
C6 |
C7 |
179.3 |
179.9 |
C6 |
C1 |
C4 |
H1 |
180.0 |
180.3 |
C1 |
C4 |
S18 |
C5 |
359.8 |
360.0 |
S18 |
C4 |
C1 |
H4 |
180.0 |
180.0 |
C6 |
C1 |
C4 |
S18 |
0.1 |
360.0 |
C4 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
C6 |
C1 |
C4 |
H4 |
180.1 |
179.9 |
C2 |
C7 |
C6 |
C1 |
30.7 |
180.0 |
C3 |
C7 |
C6 |
C1 |
213.5 |
0.0 |
C1 |
C6 |
C5 |
S18 |
359.7 |
360.0 |
C5 |
C6 |
C1 |
C7 |
180.9 |
180.1 |
C1 |
C6 |
C5 |
H5 |
179.7 |
180.0 |
C1 |
C6 |
C7 |
C2 |
30.7 |
180.0 |
C7 |
C2 |
C8 |
C9 |
0.6 |
-0.0 |
C7 |
C2 |
C8 |
C10 |
181.6 |
180.0 |
C8 |
C2 |
C7 |
H2 |
180.0 |
180.3 |
C2 |
C7 |
C3 |
N12 |
0.3 |
360.0 |
C3 |
C7 |
C2 |
C6 |
177.4 |
180.0 |
C2 |
C7 |
C3 |
H3 |
180.3 |
180.0 |
C5 |
C6 |
C7 |
C2 |
209.7 |
359.9 |
C8 |
C2 |
C7 |
C3 |
359.1 |
0.0 |
C8 |
C2 |
C7 |
C6 |
181.7 |
180.0 |
C7 |
C2 |
C8 |
H2 |
180.0 |
179.7 |
C9 |
C8 |
C2 |
C10 |
179.0 |
180.0 |
C2 |
C8 |
C9 |
N12 |
0.3 |
359.9 |
C2 |
C8 |
C9 |
N17 |
180.1 |
180.0 |
C2 |
C8 |
C10 |
N13 |
196.5 |
360.0 |
C2 |
C8 |
C10 |
N14 |
19.3 |
179.7 |
C1 |
C6 |
C7 |
C3 |
213.5 |
0.0 |
C3 |
C7 |
C2 |
C8 |
359.1 |
0.0 |
C2 |
C7 |
C3 |
C6 |
182.7 |
180.0 |
C3 |
C7 |
C2 |
H2 |
179.1 |
179.7 |
C7 |
C3 |
N12 |
C9 |
0.6 |
360.0 |
N12 |
C3 |
C7 |
H3 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
C3 |
32.5 |
179.9 |
N12 |
C3 |
C7 |
C6 |
177.6 |
180.0 |
C7 |
C3 |
N12 |
H3 |
180.0 |
180.0 |
C8 |
C9 |
N12 |
C3 |
359.1 |
0.1 |
C3 |
N12 |
C9 |
N17 |
179.3 |
180.0 |
S18 |
C4 |
C1 |
C6 |
0.1 |
360.0 |
S18 |
C4 |
C1 |
H1 |
180.1 |
179.7 |
C1 |
C4 |
S18 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
S18 |
C4 |
0.3 |
0.0 |
C4 |
S18 |
C5 |
H5 |
180.3 |
180.0 |
C1 |
C6 |
C5 |
C7 |
179.1 |
179.9 |
C5 |
C6 |
C1 |
H1 |
180.1 |
180.3 |
C2 |
C7 |
C6 |
C5 |
209.7 |
359.9 |
C3 |
C7 |
C6 |
C5 |
32.5 |
179.9 |
C4 |
S18 |
C5 |
C6 |
0.3 |
0.0 |
S18 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C5 |
S18 |
C4 |
H4 |
179.8 |
180.0 |
S18 |
C5 |
C6 |
C7 |
180.6 |
180.0 |
C6 |
C5 |
S18 |
H5 |
180.0 |
180.0 |
C1 |
C6 |
C7 |
C5 |
181.0 |
180.1 |
C7 |
C6 |
C1 |
H1 |
359.3 |
0.2 |
C6 |
C7 |
C2 |
C8 |
181.7 |
180.0 |
C2 |
C7 |
C6 |
C3 |
177.2 |
180.0 |
C6 |
C7 |
C2 |
H2 |
1.7 |
359.7 |
C6 |
C7 |
C3 |
N12 |
177.6 |
180.0 |
C6 |
C7 |
C3 |
H3 |
357.6 |
0.0 |
C7 |
C6 |
C5 |
S18 |
180.6 |
180.0 |
C7 |
C6 |
C5 |
H5 |
0.6 |
0.1 |
C2 |
C8 |
C9 |
C10 |
181.1 |
180.0 |
C9 |
C8 |
C2 |
H2 |
180.6 |
180.3 |
C3 |
N12 |
C9 |
C8 |
359.1 |
0.1 |
C9 |
C8 |
C10 |
N13 |
17.5 |
180.0 |
C9 |
C8 |
C10 |
N14 |
200.3 |
359.7 |
N12 |
C9 |
C8 |
N17 |
180.2 |
179.9 |
C8 |
C9 |
N17 |
H171 |
180.2 |
-0.0 |
C8 |
C9 |
N17 |
H172 |
300.3 |
179.9 |
C2 |
C8 |
C10 |
C9 |
178.9 |
180.0 |
C10 |
C8 |
C2 |
H2 |
1.6 |
0.3 |
C10 |
C8 |
C9 |
N12 |
179.2 |
180.0 |
C10 |
C8 |
C9 |
N17 |
359.0 |
0.0 |
N13 |
C10 |
C8 |
N14 |
177.2 |
180.3 |
C8 |
C10 |
N13 |
N15 |
182.3 |
180.0 |
C8 |
C10 |
N14 |
N16 |
178.0 |
180.0 |
C9 |
N12 |
C3 |
H3 |
180.6 |
179.9 |
N12 |
C9 |
C8 |
C10 |
179.2 |
180.0 |
C8 |
C9 |
N12 |
N17 |
179.8 |
180.1 |
N12 |
C9 |
N17 |
H171 |
360.0 |
180.0 |
N12 |
C9 |
N17 |
H172 |
120.0 |
360.0 |
N17 |
C9 |
C8 |
C10 |
359.0 |
0.0 |
C8 |
C9 |
N17 |
N12 |
180.2 |
180.0 |
H171 |
N17 |
C9 |
H172 |
240.0 |
180.1 |
C8 |
C10 |
N13 |
N14 |
182.6 |
179.8 |
N13 |
C10 |
N14 |
N16 |
0.5 |
359.8 |
C10 |
N13 |
N15 |
N16 |
360.0 |
359.8 |
C8 |
C10 |
N14 |
N13 |
177.5 |
180.2 |
N14 |
C10 |
N13 |
N15 |
359.7 |
0.2 |
C11 |
N16 |
N14 |
C10 |
180.6 |
179.9 |
C10 |
N14 |
N16 |
N15 |
359.5 |
0.1 |
C10 |
N14 |
N16 |
C11 |
180.6 |
179.9 |
N13 |
N15 |
N16 |
C11 |
179.2 |
180.2 |
N14 |
N16 |
C11 |
N15 |
178.8 |
180.2 |
H111 |
C11 |
N16 |
H112 |
240.0 |
240.0 |
H111 |
C11 |
N16 |
H113 |
120.0 |
120.0 |
H112 |
C11 |
N16 |
H113 |
240.0 |
240.0 |
N15 |
N13 |
C10 |
N14 |
359.7 |
0.2 |
C11 |
N16 |
N15 |
N13 |
179.2 |
180.2 |
N14 |
N16 |
N15 |
N13 |
0.4 |
0.0 |
C11 |
N16 |
N14 |
N15 |
181.1 |
179.8 |
N14 |
N16 |
C11 |
H111 |
360.0 |
90.0 |
N14 |
N16 |
C11 |
H112 |
120.0 |
210.0 |
N14 |
N16 |
C11 |
H113 |
240.0 |
330.0 |
N13 |
N15 |
N16 |
N14 |
0.4 |
0.0 |
C11 |
N16 |
N15 |
N14 |
178.8 |
180.2 |
N15 |
N16 |
C11 |
H111 |
181.2 |
269.8 |
N15 |
N16 |
C11 |
H112 |
301.2 |
29.7 |
N15 |
N16 |
C11 |
H113 |
61.2 |
149.8 |
C4 |
C1 |
H1 |
C6 |
180.0 |
180.3 |
H1 |
C1 |
C4 |
S18 |
180.1 |
179.7 |
H1 |
C1 |
C4 |
H4 |
0.1 |
359.7 |
H1 |
C1 |
C6 |
C5 |
180.1 |
180.3 |
H1 |
C1 |
C6 |
C7 |
359.3 |
0.2 |
H4 |
C4 |
C1 |
C6 |
180.1 |
179.9 |
C1 |
C4 |
H4 |
S18 |
180.0 |
180.1 |
H4 |
C4 |
C1 |
H1 |
0.1 |
359.7 |
H4 |
C4 |
S18 |
C5 |
179.8 |
180.0 |
C7 |
C2 |
H2 |
C8 |
180.0 |
180.3 |
H2 |
C2 |
C7 |
C3 |
179.1 |
179.7 |
H2 |
C2 |
C7 |
C6 |
1.7 |
359.7 |
H2 |
C2 |
C8 |
C9 |
180.6 |
180.3 |
H2 |
C2 |
C8 |
C10 |
1.6 |
0.3 |
C7 |
C3 |
H3 |
N12 |
180.0 |
180.0 |
H3 |
C3 |
C7 |
C6 |
357.6 |
0.0 |
H3 |
C3 |
N12 |
C9 |
180.6 |
179.9 |
C6 |
C5 |
H5 |
S18 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
C7 |
0.6 |
0.1 |
C9 |
N17 |
H171 |
H172 |
120.0 |
179.9 |
C9 |
N17 |
H172 |
H171 |
240.0 |
180.1 |
H111 |
C11 |
N16 |
N14 |
360.0 |
90.0 |
H111 |
C11 |
N16 |
N15 |
181.2 |
269.8 |
N16 |
C11 |
H111 |
H112 |
120.0 |
119.9 |
N16 |
C11 |
H111 |
H113 |
240.0 |
240.0 |
H112 |
C11 |
H111 |
H113 |
120.0 |
120.0 |
H112 |
C11 |
N16 |
N14 |
120.0 |
210.0 |
H112 |
C11 |
N16 |
N15 |
301.2 |
29.7 |
N16 |
C11 |
H112 |
H111 |
240.0 |
240.1 |
N16 |
C11 |
H112 |
H113 |
120.0 |
120.0 |
H111 |
C11 |
H112 |
H113 |
240.0 |
240.0 |
H113 |
C11 |
N16 |
N14 |
240.0 |
330.0 |
H113 |
C11 |
N16 |
N15 |
61.2 |
149.8 |
N16 |
C11 |
H113 |
H111 |
120.0 |
120.0 |
N16 |
C11 |
H113 |
H112 |
240.0 |
240.0 |
H111 |
C11 |
H113 |
H112 |
120.0 |
120.0 |