PDB Chemical Component 9X3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9X3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C10 C01 1.411 1.382
C10 C02 1.396 1.382
C10 CAJ 1.542 1.508
C01 C04 1.398 1.382
N01 C08 1.495 1.469
N01 CAJ 1.490 1.469
C02 C06 1.394 1.382
C03 C05 1.546 1.531
C03 O 1.469 1.430
C04 C11 1.405 1.383
C05 N 1.474 1.471
N C 1.489 1.470
N CAK 1.472 1.468
C06 C11 1.413 1.382
C06 CAK 1.534 1.506
C07 O 1.447 1.430
C07 C 1.541 1.530
C01 H01 1.080 1.080
C02 H02 1.080 1.081
CAJ HAJ1 1.100 1.091
CAJ HAJ2 1.100 1.090
C04 H04 1.080 1.080
N01 HA 1.000 1.009
C08 H081 1.099 1.091
C08 H082 1.099 1.090
C08 H083 1.100 1.090
C03 H031 1.100 1.090
C03 H032 1.100 1.090
C05 H051 1.100 1.090
C05 H052 1.100 1.090
C11 H11 1.080 1.080
C HC1 1.100 1.091
C HC2 1.100 1.089
CAK HAK1 1.100 1.090
CAK HAK2 1.100 1.091
C07 H071 1.100 1.090
C07 H072 1.100 1.090

Bond Angles for 9X3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 C10 C02 119.9 120.0
C01 C10 CAJ 122.3 120.0
C10 C01 C04 121.3 120.0
C10 C01 H01 119.3 120.0
C02 C10 CAJ 117.8 120.0
C10 C02 C06 118.9 120.0
C10 C02 H02 120.5 120.0
C10 CAJ N01 112.3 109.5
C10 CAJ HAJ1 108.8 109.4
C10 CAJ HAJ2 108.7 109.5
C01 C04 C11 119.0 120.0
C04 C01 H01 119.4 120.0
C01 C04 H04 120.5 120.0
C08 N01 CAJ 109.9 111.0
C08 N01 HA 109.3 111.0
N01 C08 H081 109.5 109.4
N01 C08 H082 109.5 109.5
N01 C08 H083 109.4 109.5
N01 CAJ HAJ1 108.7 109.5
N01 CAJ HAJ2 108.8 109.5
CAJ N01 HA 109.4 111.0
C02 C06 C11 121.6 120.0
C02 C06 CAK 118.0 120.0
C06 C02 H02 120.5 120.0
C05 C03 O 108.8 109.3
C03 C05 N 110.3 109.3
C05 C03 H031 109.6 109.4
C05 C03 H032 109.6 109.5
C03 C05 H051 109.2 109.6
C03 C05 H052 109.3 109.5
C03 O C07 109.1 113.7
O C03 H031 109.6 109.6
O C03 H032 109.7 109.5
C04 C11 C06 119.3 120.0
C11 C04 H04 120.5 120.0
C04 C11 H11 120.4 120.0
C05 N C 110.4 110.7
C05 N CAK 109.1 111.0
N C05 H051 109.3 109.5
N C05 H052 109.3 109.5
C N CAK 107.5 111.0
N C C07 107.2 109.3
N C HC1 110.1 109.5
N C HC2 110.1 109.5
N CAK C06 111.7 109.5
N CAK HAK1 108.9 109.5
N CAK HAK2 108.9 109.5
C11 C06 CAK 120.4 120.0
C06 C11 H11 120.3 120.0
C06 CAK HAK1 108.9 109.5
C06 CAK HAK2 108.9 109.5
O C07 C 110.6 109.3
O C07 H071 109.2 109.5
O C07 H072 109.2 109.5
C07 C HC1 110.0 109.5
C07 C HC2 110.0 109.5
C C07 H071 109.2 109.5
C C07 H072 109.2 109.6
HAJ1 CAJ HAJ2 109.5 109.5
H081 C08 H082 109.4 109.5
H081 C08 H083 109.5 109.5
H082 C08 H083 109.5 109.5
H031 C03 H032 109.5 109.6
H051 C05 H052 109.5 109.5
HC1 C HC2 109.5 109.5
HAK1 CAK HAK2 109.5 109.4
H071 C07 H072 109.5 109.5

Torsion Angles for 9X3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C02 C10 C01 CAJ 178.7 180.3
C01 C10 C02 C06 1.3 359.9
C01 C10 C02 H02 181.3 180.0
C01 C10 CAJ N01 291.3 90.0
C01 C10 CAJ HAJ1 51.6 210.0
C01 C10 CAJ HAJ2 170.8 330.0
C10 C01 C04 C11 1.2 359.9
C04 C01 C10 H01 180.0 180.1
C10 C01 C04 H04 181.2 180.0
C01 C10 C02 CAJ 181.2 179.7
C02 C10 C01 C04 358.5 0.1
C02 C10 C01 H01 178.5 180.0
C02 C10 CAJ N01 112.5 269.7
C02 C10 CAJ HAJ1 232.9 29.7
C02 C10 CAJ HAJ2 352.1 149.7
C10 C02 C06 C11 359.2 0.1
C10 C02 C06 CAK 179.2 180.0
C06 C02 C10 H02 180.0 179.9
C01 C10 CAJ C02 178.8 180.3
CAJ C10 C01 C04 179.8 179.8
CAJ C10 C01 H01 359.7 359.6
CAJ C10 C02 C06 180.1 180.3
CAJ C10 C02 H02 0.1 0.3
C08 N01 CAJ C10 283.2 180.0
N01 CAJ C10 HAJ1 239.6 240.0
N01 CAJ C10 HAJ2 120.4 120.0
C10 CAJ N01 HA 163.2 56.0
HAJ1 CAJ C10 HAJ2 240.8 240.0
C04 C01 C10 C02 358.5 0.1
C04 C01 C10 CAJ 179.8 179.8
C10 C01 C04 H01 180.0 179.9
C01 C04 C11 C06 359.3 0.1
C11 C04 C01 H04 180.0 179.9
C01 C04 C11 H11 179.2 180.0
C10 CAJ N01 C08 283.2 180.0
C08 N01 CAJ HAJ1 162.8 60.0
C08 N01 CAJ HAJ2 43.6 300.0
CAJ N01 C08 HA 239.9 236.1
H081 C08 N01 H082 240.0 240.0
H081 C08 N01 H083 120.0 120.0
H082 C08 N01 H083 240.0 240.0
C10 CAJ N01 HAJ1 120.4 119.9
C10 CAJ N01 HAJ2 239.6 240.0
C08 N01 CAJ HA 120.0 124.0
CAJ N01 C08 H081 180.0 300.0
CAJ N01 C08 H082 300.0 60.0
CAJ N01 C08 H083 60.0 180.0
HAJ1 CAJ N01 HAJ2 119.2 120.1
C06 C02 C10 CAJ 180.1 180.3
C10 C02 C06 H02 180.0 180.1
C04 C11 C06 C02 0.6 359.9
N CAK C06 C02 125.1 90.0
C11 C06 C02 CAK 179.9 180.1
C02 C06 C11 H11 180.6 180.1
C02 C06 CAK HAK1 4.8 330.0
C02 C06 CAK HAK2 245.5 210.0
C05 C03 O C07 299.5 301.3
O C03 C05 H031 240.1 240.0
O C03 C05 H032 119.9 119.9
C03 C05 N C 301.6 301.4
C03 C05 N CAK 183.7 177.6
N C05 C03 H051 239.9 240.0
N C05 C03 H052 120.1 119.9
H031 C03 C05 H032 239.8 239.9
H051 C05 C03 H052 240.3 239.9
O C03 C05 N 58.2 56.8
C05 C03 O H031 119.9 119.9
C05 C03 O H032 240.1 240.1
O C03 C05 H051 178.4 176.8
O C03 C05 H052 298.1 296.9
C03 O C07 C 63.7 58.7
C03 O C07 H071 183.8 178.7
C03 O C07 H072 303.5 298.7
H031 C03 O H032 120.2 120.2
C11 C04 C01 H01 181.2 180.0
C01 C04 C11 H04 180.0 180.1
C02 C06 C11 C04 0.6 359.9
C04 C11 C06 CAK 180.5 179.9
C06 C11 C04 H11 180.0 180.2
N C05 C03 O 58.2 56.8
N C05 C03 H031 178.1 176.8
N C05 C03 H032 298.3 296.9
C03 C05 N H051 120.1 120.0
C03 C05 N H052 239.9 240.0
C N C05 CAK 117.9 123.8
C05 N C C07 58.5 58.6
C05 N C HC1 178.2 178.5
C05 N C HC2 298.9 298.6
C05 N CAK C06 290.3 190.0
C05 N CAK HAK1 50.6 310.0
C05 N CAK HAK2 169.9 70.0
H051 C05 N H052 119.8 120.0
C05 N C CAK 241.1 236.2
C N C05 H051 181.5 181.4
C N C05 H052 61.8 61.4
C N CAK C06 170.6 66.4
C N CAK HAK1 290.9 186.4
C N CAK HAK2 50.2 306.4
O C07 C N 298.3 303.1
C07 C N HC1 240.3 240.1
C07 C N HC2 119.6 120.0
N C C07 H071 178.2 183.2
N C C07 H072 58.5 63.1
HC1 C N HC2 239.3 239.9
C02 C06 CAK N 125.1 90.0
C05 N CAK C 119.7 123.6
CAK N C05 H051 63.6 57.6
CAK N C05 H052 303.9 297.6
CAK N C C07 177.4 182.4
CAK N C HC1 297.0 302.3
CAK N C HC2 57.8 62.4
C11 C06 CAK N 305.2 269.9
C06 CAK N HAK1 239.7 240.0
C06 CAK N HAK2 120.4 120.0
HAK1 CAK N HAK2 240.7 240.0
C02 C06 C11 CAK 180.1 179.9
C11 C06 C02 H02 179.2 180.0
C06 C11 C04 H04 179.3 180.0
C04 C11 C06 H11 180.0 179.8
N CAK C06 C11 305.2 269.9
C11 C06 CAK HAK1 184.8 149.9
C11 C06 CAK HAK2 65.5 30.0
C02 C06 CAK C11 179.9 180.1
CAK C06 C02 H02 359.2 360.0
N CAK C06 HAK1 120.4 120.0
N CAK C06 HAK2 239.6 240.0
CAK C06 C11 H11 0.5 0.1
HAK1 CAK C06 HAK2 119.3 119.9
C07 O C03 H031 179.6 181.5
C07 O C03 H032 59.4 61.2
N C C07 O 298.3 303.1
O C07 C HC1 178.7 183.2
O C07 C HC2 58.0 63.1
C C07 O H071 239.8 240.0
C C07 O H072 120.1 120.0
H071 C07 O H072 240.3 240.0
C07 C N CAK 177.4 182.4
N C C07 HC1 119.7 119.9
N C C07 HC2 240.3 240.0
O C07 C H071 120.1 119.9
O C07 C H072 239.9 240.0
HC1 C C07 HC2 120.7 120.1
H071 C07 C H072 119.7 120.1
H01 C01 C10 C02 178.5 180.0
H01 C01 C10 CAJ 359.7 359.6
C10 C01 H01 C04 180.0 180.1
H01 C01 C04 C11 181.2 180.0
H01 C01 C04 H04 1.2 0.1
H02 C02 C10 CAJ 0.1 0.3
C10 C02 H02 C06 180.0 179.9
H02 C02 C06 C11 179.2 180.0
H02 C02 C06 CAK 359.2 360.0
C10 CAJ HAJ1 N01 237.4 240.0
C10 CAJ HAJ1 HAJ2 118.7 120.0
N01 CAJ HAJ1 HAJ2 241.3 239.9
HAJ1 CAJ N01 HA 42.8 296.1
C10 CAJ HAJ2 N01 122.6 120.0
C10 CAJ HAJ2 HAJ1 241.3 240.1
N01 CAJ HAJ2 HAJ1 118.7 120.1
HAJ2 CAJ N01 HA 283.6 176.0
C01 C04 H04 C11 180.0 179.9
H04 C04 C01 H01 1.2 0.1
H04 C04 C11 C06 179.3 180.0
H04 C04 C11 H11 359.2 359.8
C08 N01 HA CAJ 239.6 236.1
HA N01 C08 H081 300.1 63.9
HA N01 C08 H082 60.1 184.0
HA N01 C08 H083 180.1 303.9
HA N01 CAJ HAJ1 42.8 296.1
HA N01 CAJ HAJ2 283.6 176.0
H081 C08 N01 CAJ 180.0 300.0
H081 C08 N01 HA 300.1 63.9
N01 C08 H081 H082 120.0 120.0
N01 C08 H081 H083 240.0 240.0
H082 C08 H081 H083 120.0 120.0
H082 C08 N01 CAJ 300.0 60.0
H082 C08 N01 HA 60.1 184.0
N01 C08 H082 H081 240.0 240.0
N01 C08 H082 H083 120.0 120.0
H081 C08 H082 H083 240.0 240.0
H083 C08 N01 CAJ 60.0 180.0
H083 C08 N01 HA 180.1 303.9
N01 C08 H083 H081 120.0 120.0
N01 C08 H083 H082 240.0 240.0
H081 C08 H083 H082 120.0 120.1
C05 C03 H031 O 240.6 240.2
H031 C03 C05 N 178.1 176.8
C05 C03 H031 H032 120.3 120.0
H031 C03 C05 H051 298.2 296.8
H031 C03 C05 H052 58.0 56.9
H031 C03 O C07 179.6 181.5
O C03 H031 H032 239.7 239.8
C05 C03 H032 O 119.4 119.8
H032 C03 C05 N 298.3 296.9
C05 C03 H032 H031 239.7 240.0
H032 C03 C05 H051 58.4 56.9
H032 C03 C05 H052 178.2 177.0
H032 C03 O C07 59.4 61.2
O C03 H032 H031 120.3 120.2
H051 C05 C03 O 178.4 176.8
C03 C05 H051 N 239.3 240.2
H051 C05 C03 H031 298.2 296.8
H051 C05 C03 H032 58.4 56.9
C03 C05 H051 H052 119.6 120.1
H051 C05 N C 181.5 181.4
H051 C05 N CAK 63.6 57.6
N C05 H051 H052 240.4 240.0
H052 C05 C03 O 298.1 296.9
C03 C05 H052 N 120.8 119.8
H052 C05 C03 H031 58.0 56.9
H052 C05 C03 H032 178.2 177.0
C03 C05 H052 H051 240.4 239.8
H052 C05 N C 61.8 61.4
H052 C05 N CAK 303.9 297.6
N C05 H052 H051 119.6 120.1
C04 C11 H11 C06 180.0 180.2
H11 C11 C04 H04 359.2 359.8
H11 C11 C06 CAK 0.5 0.1
HC1 C N CAK 297.0 302.3
N C HC1 C07 242.1 240.2
N C HC1 HC2 121.1 120.1
C07 C HC1 HC2 239.0 239.9
HC1 C C07 H071 58.5 63.3
HC1 C C07 H072 298.8 303.2
HC2 C N CAK 57.8 62.4
N C HC2 C07 117.9 119.9
N C HC2 HC1 238.9 239.9
C07 C HC2 HC1 121.0 120.1
HC2 C C07 H071 297.8 303.2
HC2 C C07 H072 178.1 183.1
N CAK HAK1 C06 237.9 240.0
N CAK HAK1 HAK2 119.0 120.0
C06 CAK HAK1 HAK2 241.0 240.0
N CAK HAK2 C06 122.1 120.0
N CAK HAK2 HAK1 241.0 240.0
C06 CAK HAK2 HAK1 118.9 120.0
O C07 H071 C 239.0 240.2
O C07 H071 H072 119.5 120.0
H071 C07 C HC1 58.5 63.3
H071 C07 C HC2 297.8 303.2
C C07 H071 H072 240.5 239.8
O C07 H072 C 121.0 119.8
O C07 H072 H071 240.5 240.0
H072 C07 C HC1 298.8 303.2
H072 C07 C HC2 178.1 183.1
C C07 H072 H071 119.5 120.2