PDB Chemical Component 9SG

Ideal Model

Chemical Description

Name (2R,3R,5R,6R)-5-acetamido-2,3-bis(fluoranyl)-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid
Synonyms (2~{R},3~{R},5~{R},6~{R})-5-acetamido-2,3-bis(fluoranyl)-6-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid
Formula C11 H17 F2 N O7
Formal charge 0
Molecular weight 313.252 g/mol
Component type D-saccharide

Chemical features

Atom count 38
Chiral atom count 6
Chiral atoms C5 C3 C6 C2 C7 C8
Observed leaving atoms HO7
Bond count 38
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (2R,3R,5R,6R)-5-(acetylamino)-2,3-difluoro-6-[(1R,2R)-1,2,3-trihydroxypropyl]tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name)
Systematic name (OpenEye OEToolkits) (2~{R},3~{R},5~{R},6~{R})-5-acetamido-2,3-bis(fluoranyl)-6-[(1~{R},2~{R})-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CC(=O)N[C@@H]1C[C@@H](F)[C@@](F)(O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O
SMILES (CACTVS) CC(=O)N[CH]1C[CH](F)[C](F)(O[CH]1[CH](O)[CH](O)CO)C(O)=O
Stereo SMILES (OpenEye) CC(=O)N[C@@H]1C[C@H]([C@@](O[C@H]1[C@@H]([C@@H](CO)O)O)(C(=O)O)F)F
InChI descriptor InChI=1S/C11H17F2NO7/c1-4(16)14-5-2-7(12)11(13,10(19)20)21-9(5)8(18)6(17)3-15/h5-9,15,17-18H,2-3H2,1H3,(H,14,16)(H,19,20)/t5-,6-,7-,8-,9-,11-/m1/s1
InChIKey descriptor AHSNGFVNAWRJGS-WNBQUBFESA-N

Status Information

Last modified 2020-07-17
Created 2017-06-07
Release status REL
Model PDB code 5W26
Processing site RCSB