PDB Chemical Component 9R3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9R3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O3 C29 1.258 1.216
C26 C25 1.386 1.356
C26 C27 1.401 1.403
C29 O4 1.233 1.348
C29 C27 1.499 1.473
C25 C23 1.371 1.414
C27 C28 1.399 1.394
C23 N3 1.357 1.344
C23 C24 1.399 1.401
C28 C24 1.393 1.388
N3 C21 1.356 1.292
C24 S1 1.668 1.761
C21 S1 1.692 1.758
C21 N2 1.346 1.377
C19 C22 1.510 1.530
C19 C14 1.550 1.531
C16 N2 1.464 1.469
C16 C14 1.511 1.531
N2 C18 1.466 1.468
C22 C20 1.511 1.530
C12 C11 1.397 1.383
C12 C13 1.380 1.382
C14 C15 1.532 1.532
C11 C10 1.393 1.383
C20 C17 1.525 1.531
CL1 C13 1.792 1.736
C18 C17 1.520 1.530
C13 C5 1.387 1.394
C10 C9 1.364 1.381
C17 C15 1.503 1.532
C15 O2 1.418 1.428
C5 C9 1.394 1.395
C5 C3 1.505 1.483
O2 C6 1.408 1.429
C9 CL2 1.772 1.736
C6 C2 1.498 1.507
C3 C2 1.481 1.423
C3 N1 1.346 1.311
C2 C1 1.449 1.353
N1 O1 1.328 1.208
C1 O1 1.332 1.341
C1 C4 1.481 1.507
C4 C8 1.529 1.529
C4 C7 1.522 1.530
C8 C7 1.522 1.529
O4 H1 0.950 0.967
C26 H2 1.080 1.080
C25 H3 1.080 1.080
C28 H4 1.080 1.079
C16 H5 1.100 1.090
C16 H6 1.100 1.090
C18 H7 1.100 1.090
C18 H8 1.100 1.090
C17 H9 1.099 1.090
C20 H10 1.100 1.090
C20 H11 1.100 1.090
C22 H12 1.100 1.090
C22 H13 1.100 1.090
C19 H14 1.100 1.089
C19 H15 1.100 1.090
C14 H16 1.100 1.090
C15 H17 1.100 1.090
C6 H18 1.100 1.090
C6 H19 1.100 1.090
C4 H20 1.100 1.090
C8 H21 1.100 1.090
C8 H22 1.100 1.090
C7 H23 1.100 1.090
C7 H24 1.100 1.090
C12 H25 1.080 1.080
C11 H26 1.080 1.081
C10 H27 1.080 1.081

Bond Angles for 9R3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O3 C29 C27 120.9 120.0
C26 C25 C23 120.1 120.8
C25 C26 H2 119.3 119.8
C26 C25 H3 120.0 119.6
C26 C27 C28 119.2 119.7
C29 O4 H1 109.5 117.0
C29 C27 C28 122.3 120.2
C25 C23 N3 129.3 128.6
C25 C23 C24 119.0 118.6
C23 C25 H3 120.0 119.6
C27 C28 C24 118.3 119.9
C27 C28 H4 120.8 120.0
N3 C23 C24 111.6 112.8
C23 N3 C21 111.2 118.0
C23 C24 C28 122.1 120.5
C23 C24 S1 113.3 108.5
C28 C24 S1 124.7 131.1
C24 C28 H4 120.8 120.0
N3 C21 S1 114.6 110.3
N3 C21 N2 124.0 124.8
C21 N2 C18 117.1 111.1
C19 C22 H12 108.9 109.5
C19 C22 H13 108.9 109.5
C16 C14 C19 109.6 109.3
C19 C14 C15 115.2 109.1
C14 C19 H14 109.3 109.5
C14 C19 H15 109.3 109.5
C19 C14 H16 106.6 109.6
C16 N2 C18 125.8 111.2
C16 C14 C15 111.0 109.1
C14 C16 H5 108.6 109.4
C14 C16 H6 108.6 109.5
C16 C14 H16 107.0 109.7
N2 C18 C17 108.6 109.6
N2 C18 H7 109.7 109.5
N2 C18 H8 109.7 109.4
C22 C20 H10 108.5 109.5
C22 C20 H11 108.5 109.5
C12 C11 C10 121.8 120.3
C11 C12 H25 120.8 120.0
C12 C11 H26 119.1 119.9
C17 C15 C14 105.8 108.9
C14 C15 O2 116.1 109.6
C15 C14 H16 106.9 110.0
C14 C15 H17 108.6 109.6
C11 C10 C9 118.8 120.1
C10 C11 H26 119.1 119.9
C11 C10 H27 120.6 119.9
C20 C17 C15 114.6 109.1
C20 C17 H9 108.7 110.0
C18 C17 C15 108.1 109.1
C17 C18 H7 109.7 109.5
C17 C18 H8 109.7 109.4
C18 C17 H9 108.7 109.7
C13 C5 C9 120.4 119.7
C5 C9 C10 120.4 119.9
C10 C9 CL2 119.5 120.1
C9 C10 H27 120.6 119.9
C17 C15 O2 107.0 109.6
C15 C17 H9 108.9 109.6
C17 C15 H17 109.0 109.5
C15 O2 C6 114.2 114.0
O2 C15 H17 110.1 109.7
C5 C9 CL2 120.1 120.1
O2 C6 C2 107.7 109.5
O2 C6 H18 109.9 109.5
O2 C6 H19 109.9 109.5
C6 C2 C1 127.8 128.0
C2 C6 H18 109.9 109.5
C2 C6 H19 109.9 109.5
C2 C1 O1 105.7 106.7
C2 C1 C4 135.3 126.6
C4 C1 O1 119.1 126.7
C1 C4 C8 112.0 117.5
C1 C4 C7 117.9 117.5
C1 C4 H20 118.4 115.6
C8 C4 C7 59.9 60.0
C4 C8 C7 59.9 60.0
C8 C4 H20 117.4 117.5
C4 C8 H21 120.0 117.5
C4 C8 H22 120.0 117.5
C4 C7 C8 60.3 60.0
C7 C4 H20 117.6 117.5
C4 C7 H23 120.0 117.4
C4 C7 H24 120.0 117.5
C7 C8 H21 120.0 117.5
C7 C8 H22 120.0 117.5
C8 C7 H23 119.9 117.5
C8 C7 H24 120.0 117.5
H5 C16 H6 109.5 109.4
H7 C18 H8 109.5 109.4
H10 C20 H11 109.5 109.5
H12 C22 H13 109.5 109.5
H14 C19 H15 109.5 109.5
H18 C6 H19 109.5 109.5
H21 C8 H22 109.5 115.5
H23 C7 H24 109.4 115.6

Torsion Angles for 9R3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3 C29 O4 H1 0.0 360.0
O3 C29 C27 C28 176.6 360.0
C25 C26 C27 C28 0.2 0.3
C26 C25 C23 N3 177.9 180.0
C26 C25 C23 C24 0.8 0.0
C23 C25 C26 H3 180.0 180.0
C29 C27 C26 C28 180.9 179.7
C26 C27 C28 C24 1.0 359.5
C26 C27 C28 H4 181.0 179.7
C26 C27 C29 C28 179.1 180.3
C27 C29 O4 H1 181.8 180.0
C29 C27 C28 C24 180.1 179.8
C29 C27 C28 H4 0.1 360.0
C23 C25 C26 H2 178.9 180.0
C26 C25 C23 H3 180.0 180.0
N3 C23 C25 C24 177.1 180.0
C25 C23 N3 C21 180.8 180.0
C25 C23 C24 C28 0.4 359.8
C25 C23 C24 S1 179.4 180.0
C23 C24 C28 C27 358.7 0.5
C27 C28 C24 S1 179.8 180.2
C24 C28 C27 H4 180.0 179.8
C25 C23 N3 C24 182.7 180.0
N3 C23 C25 H3 358.0 0.0
N3 C23 C24 C28 182.8 179.8
N3 C23 C24 S1 1.8 0.0
C23 N3 C21 S1 1.3 360.0
C23 N3 C21 N2 184.7 179.9
C25 C23 C24 N3 177.6 180.0
C24 C23 C25 H3 180.8 180.0
C27 C28 C24 C23 358.7 0.5
C24 C23 N3 C21 358.1 0.0
C28 C24 C23 S1 181.0 179.7
C23 C24 C28 H4 178.7 180.3
C27 C28 C24 H4 180.0 180.2
C23 C24 C28 S1 178.9 180.3
C21 N3 C23 C24 358.1 0.0
N3 C21 N2 C18 164.5 0.0
C23 C24 S1 C28 181.0 179.7
S1 C24 C28 H4 359.8 360.0
N3 C21 S1 C24 359.8 0.0
N3 C21 S1 N2 183.3 179.9
N3 C21 N2 S1 176.4 180.1
C16 N2 C21 C18 186.6 235.7
C21 N2 C18 C17 157.3 174.2
C21 N2 C18 H7 277.2 294.3
C21 N2 C18 H8 37.4 54.2
C16 C14 C19 C22 251.4 301.2
C19 C22 C20 H10 64.5 299.7
C19 C22 C20 H11 183.3 179.7
H12 C22 C19 H13 240.7 120.0
C14 C19 C22 H12 161.5 180.3
C14 C19 C22 H13 280.7 60.3
C16 C14 C19 C15 233.9 240.7
C19 C14 C16 H5 331.6 299.9
C19 C14 C16 H6 212.6 179.9
C16 C14 C19 H16 115.5 120.2
C17 C15 C14 C19 297.9 298.8
C19 C14 C15 O2 56.4 58.6
C15 C14 C19 H16 241.6 239.5
C19 C14 C15 H17 181.1 179.0
H14 C19 C14 H15 119.8 120.0
C21 N2 C16 C18 172.8 124.2
C16 N2 C18 C17 330.1 298.4
C16 N2 C18 H7 89.9 58.5
C16 N2 C18 H8 210.2 178.4
C19 C14 C16 C15 128.4 119.3
C16 C14 C19 H14 131.3 181.2
C16 C14 C19 H15 11.5 61.2
C19 C14 C16 H16 244.7 239.8
C14 C16 N2 C18 21.3 61.6
C17 C15 C14 C16 63.2 58.2
C16 C14 C15 O2 181.7 178.0
C15 C14 C16 H16 116.3 120.6
C16 C14 C15 H17 306.4 298.4
H5 C16 C14 H6 118.9 119.9
N2 C18 C17 C15 54.5 59.4
C17 C18 N2 H7 240.1 239.9
C17 C18 N2 H8 119.9 120.0
N2 C18 C17 H9 172.5 179.5
H7 C18 N2 H8 239.8 240.1
C22 C20 C17 C15 8.5 299.5
C22 C20 C17 H9 246.4 179.2
H10 C20 C22 H11 241.2 120.0
C12 C11 C10 C9 359.3 0.0
C10 C11 C12 H26 180.0 179.9
C12 C11 C10 H27 179.3 180.0
C12 C13 C5 C9 358.9 0.0
C16 C14 C15 C19 125.3 119.4
C15 C14 C19 H14 257.3 300.5
C15 C14 C19 H15 137.6 180.5
C19 C14 C15 H16 118.3 120.3
C15 C14 C16 H5 203.1 180.6
C15 C14 C16 H6 84.2 60.6
C16 C14 C15 H16 243.6 239.7
C20 C17 C15 C14 46.9 61.2
C18 C17 C15 C14 286.7 301.8
C17 C15 C14 O2 241.5 240.1
C14 C15 C17 H9 168.8 181.7
C17 C15 C14 H17 116.8 119.7
C14 C15 O2 C6 60.2 90.6
O2 C15 C14 H17 235.3 239.6
C10 C11 C12 H25 177.9 180.0
C12 C11 C10 H26 180.0 180.1
C5 C9 C10 C11 2.6 0.0
C11 C10 C9 CL2 179.6 180.2
C9 C10 C11 H27 180.0 180.0
C18 C17 C20 C15 120.4 119.3
C20 C17 C18 H7 170.3 180.0
C20 C17 C18 H8 50.0 60.1
C18 C17 C20 H9 242.4 239.6
C20 C17 C15 O2 282.5 301.4
C15 C17 C20 H9 122.0 120.3
C20 C17 C15 H17 163.4 181.0
CL1 C13 C5 C9 181.9 180.1
N2 C18 C17 H7 119.9 120.1
N2 C18 C17 H8 240.1 240.0
C20 C17 C18 C15 235.6 240.7
C20 C17 C18 H9 117.6 120.6
C18 C17 C15 O2 162.3 182.0
C15 C17 C18 H9 241.9 239.9
C18 C17 C15 H17 43.3 61.6
H7 C18 C17 H8 120.3 119.9
C13 C5 C9 C10 358.2 360.0
C13 C5 C9 CL2 181.2 179.8
C9 C10 C11 H26 179.3 179.9
C11 C10 C9 H27 180.0 180.0
C5 C9 C10 CL2 183.0 179.8
C19 C14 C15 C17 297.9 298.8
C16 C14 C15 C17 63.2 58.2
C14 C15 C17 O2 124.4 119.9
C17 C15 C14 H16 179.6 178.5
C14 C15 C17 H17 243.5 240.2
C20 C17 C15 H9 238.1 239.5
C15 C17 C18 H7 294.6 299.3
C15 C17 C18 H8 174.3 179.4
C18 C17 C15 H9 117.9 120.1
C17 C15 O2 C6 178.0 210.0
O2 C15 C17 H17 119.1 120.4
C17 C15 O2 C14 117.8 119.4
O2 C15 C14 H16 298.2 298.4
C14 C15 O2 H17 123.9 120.3
O2 C15 C17 H9 44.4 61.9
C17 C15 O2 H17 241.7 239.8
C15 O2 C6 C2 171.9 180.0
C15 O2 C6 H18 291.7 300.0
C15 O2 C6 H19 52.2 60.0
C11 C10 C9 C5 2.6 0.0
C10 C9 C5 CL2 177.0 180.2
C5 C9 C10 H27 182.6 180.1
C6 O2 C15 H17 296.4 330.3
O2 C6 C2 C1 241.1 84.0
C2 C6 O2 H18 240.3 240.0
C2 C6 O2 H19 119.7 120.0
H18 C6 O2 H19 239.4 240.0
C5 C9 CL2 C10 177.0 180.2
CL2 C9 C10 H27 359.7 0.3
O2 C6 C2 H18 119.7 120.0
O2 C6 C2 H19 240.3 240.0
C6 C2 C1 O1 182.9 180.0
C6 C2 C1 C4 2.2 0.1
H18 C6 C2 H19 120.6 120.0
C3 C2 C6 H18 304.0 143.7
C3 C2 C6 H19 183.5 23.8
C1 C2 C6 H18 121.4 324.0
C1 C2 C6 H19 0.9 204.1
C4 C1 C2 O1 179.4 180.1
C2 C1 C4 C8 240.7 240.0
C2 C1 C4 C7 174.2 171.4
C2 C1 C4 H20 22.3 25.7
C2 C1 O1 C4 179.5 180.1
O1 C1 C4 C8 60.0 60.0
O1 C1 C4 C7 353.5 351.4
O1 C1 C4 H20 201.6 205.7
C2 C1 C4 O1 180.7 179.9
C8 C4 C1 C7 66.5 68.6
C1 C4 C8 C7 249.6 252.5
C8 C4 C1 H20 218.4 214.3
C1 C4 C8 H21 359.0 0.0
C1 C4 C8 H22 140.1 145.0
C1 C4 C7 C8 100.6 107.5
C7 C4 C1 H20 151.9 145.7
C1 C4 C7 H23 210.1 215.0
C1 C4 C7 H24 351.0 360.0
C8 C4 C1 O1 60.0 60.0
C1 C4 C8 H20 142.0 145.0
C8 C4 C7 C8 360.0 360.0
C7 C4 C8 H20 252.4 252.5
C8 C4 C7 H23 109.5 107.5
C8 C4 C7 H24 250.4 252.5
C7 C8 C4 H21 250.6 252.5
C7 C8 C4 H22 109.4 107.5
C4 C8 C7 H23 250.4 252.6
C4 C8 C7 H24 109.5 107.4
H21 C8 C4 H22 218.9 215.0
C7 C4 C1 O1 353.5 351.4
C1 C4 C7 H20 207.9 215.0
C7 C4 C8 C7 -0.0 -0.0
C8 C4 C7 H20 107.3 107.5
C7 C4 C8 H21 109.4 107.5
C7 C4 C8 H22 250.6 252.5
C4 C7 C8 H21 250.6 252.5
C4 C7 C8 H22 109.4 107.5
C8 C7 C4 H23 250.5 252.5
C8 C7 C4 H24 109.6 107.5
H23 C7 C4 H24 219.1 215.0
C7 C8 C4 C7 -0.0 -0.0
C7 C8 C4 H20 107.6 107.5
C4 C8 C7 H21 109.4 107.5
C4 C8 C7 H22 250.6 252.5
C8 C7 C4 H20 252.7 252.5
C4 C7 C8 H23 109.6 107.4
C4 C7 C8 H24 250.5 252.6
H21 C8 C7 H22 141.2 144.9
H23 C7 C8 H24 140.9 145.2
H2 C26 C25 C23 178.9 180.0
H2 C26 C25 H3 358.9 0.0
H2 C26 C27 C28 180.2 180.2
C26 C25 H3 C23 180.0 180.0
H3 C25 C26 H2 358.9 0.0
H3 C25 C23 N3 358.0 0.0
H3 C25 C23 C24 180.8 180.0
C27 C28 H4 C24 180.0 179.8
H4 C28 C24 S1 359.8 360.0
H5 C16 C14 C19 331.6 299.9
H5 C16 N2 C18 141.9 181.6
H5 C16 C14 C15 203.1 180.6
C14 C16 H5 H6 241.6 240.0
H5 C16 C14 H16 86.8 60.0
H6 C16 C14 C19 212.6 179.9
H6 C16 N2 C18 260.8 301.5
H6 C16 C14 C15 84.2 60.6
C14 C16 H6 H5 118.4 119.9
H6 C16 C14 H16 327.9 300.1
N2 C18 H7 C17 240.8 239.9
N2 C18 H7 H8 120.4 119.9
H7 C18 C17 C15 294.6 299.3
C17 C18 H7 H8 239.6 240.1
H7 C18 C17 H9 52.7 59.4
N2 C18 H8 C17 119.2 120.1
N2 C18 H8 H7 239.6 240.1
H8 C18 C17 C15 174.3 179.4
C17 C18 H8 H7 120.4 120.0
H8 C18 C17 H9 292.4 299.5
H9 C17 C15 C14 168.8 181.7
C20 C17 H9 C15 125.4 120.0
C18 C17 H9 C15 242.5 240.2
H9 C17 C18 H7 52.7 59.4
H9 C17 C18 H8 292.4 299.5
H9 C17 C15 O2 44.4 61.9
H9 C17 C15 H17 285.3 301.5
C22 C20 H10 H11 118.2 240.0
H10 C20 C17 C15 247.9 59.5
H10 C20 C17 H9 125.8 299.2
C22 C20 H11 H10 241.8 120.0
H11 C20 C17 C15 129.1 179.5
H11 C20 C17 H9 7.0 59.3
C19 C22 H12 H13 118.9 240.0
H12 C22 C20 H10 304.1 59.8
H12 C22 C20 H11 62.9 299.7
C19 C22 H13 H12 241.1 120.0
H13 C22 C20 H10 184.9 179.7
H13 C22 C20 H11 303.7 59.7
H14 C19 C22 H12 281.6 300.3
H14 C19 C22 H13 40.8 180.3
H14 C19 C14 C15 257.3 300.5
C14 C19 H14 H15 240.4 240.0
H14 C19 C14 H16 15.7 61.0
H15 C19 C22 H12 41.3 60.3
H15 C19 C22 H13 160.6 300.3
H15 C19 C14 C15 137.6 180.5
C14 C19 H15 H14 119.6 120.0
H15 C19 C14 H16 255.9 301.0
C16 C14 H16 C19 242.8 240.0
C19 C14 H16 C15 236.3 240.0
H16 C14 C19 H14 15.7 61.0
H16 C14 C19 H15 255.9 301.0
C16 C14 H16 C15 119.0 120.0
H16 C14 C16 H5 86.8 60.0
H16 C14 C16 H6 327.9 300.1
H16 C14 C15 O2 298.2 298.4
H16 C14 C15 H17 62.8 58.8
C17 C15 H17 C14 245.3 240.6
C14 C15 H17 O2 231.8 239.7
H17 C15 C14 H16 62.8 58.8
C17 C15 H17 O2 117.1 120.3
H17 C15 C17 H9 285.3 301.5
H17 C15 O2 C6 296.4 330.3
O2 C6 H18 C2 241.7 240.0
O2 C6 H18 H19 120.8 120.0
H18 C6 C2 C1 121.4 324.0
C2 C6 H18 H19 239.2 240.0
O2 C6 H19 C2 118.3 120.0
O2 C6 H19 H18 239.2 240.0
H19 C6 C2 C1 0.9 204.1
C2 C6 H19 H18 120.8 120.0
H20 C4 C1 O1 201.6 205.7
C1 C4 H20 C8 220.4 214.3
C1 C4 H20 C7 152.0 145.7
C8 C4 H20 C7 291.5 291.4
H20 C4 C8 C7 107.6 107.5
H20 C4 C8 H21 217.0 215.0
H20 C4 C8 H22 358.1 360.0
H20 C4 C7 C8 252.7 252.5
H20 C4 C7 H23 2.2 0.0
H20 C4 C7 H24 143.1 145.0
H21 C8 C4 C7 109.4 107.5
C4 C8 H21 C7 289.6 291.3
H21 C8 C4 H20 217.0 215.0
C4 C8 H21 H22 144.8 145.7
C7 C8 H21 H22 215.2 214.4
H21 C8 C7 H23 141.0 145.1
H21 C8 C7 H24 0.1 359.9
H22 C8 C4 C7 250.6 252.5
C4 C8 H22 C7 70.4 68.7
H22 C8 C4 H20 358.1 360.0
C4 C8 H22 H21 215.2 214.3
C7 C8 H22 H21 144.8 145.6
H22 C8 C7 H23 359.9 0.1
H22 C8 C7 H24 219.0 215.0
C4 C7 H23 C8 289.1 291.4
H23 C7 C4 H20 2.2 0.0
C4 C7 H23 H24 144.6 145.6
H23 C7 C8 H21 141.0 145.1
H23 C7 C8 H22 359.9 0.1
C8 C7 H23 H24 215.4 214.2
C4 C7 H24 C8 70.8 68.6
H24 C7 C4 H20 143.1 145.0
C4 C7 H24 H23 215.4 214.4
H24 C7 C8 H21 0.1 359.9
H24 C7 C8 H22 219.0 215.0
C8 C7 H24 H23 144.6 145.8
H25 C12 C11 C10 177.9 180.0
H25 C12 C11 H26 357.9 0.0
C12 C11 H26 C10 180.0 179.9
H26 C11 C12 H25 357.9 0.0
H26 C11 C10 C9 179.3 179.9
H26 C11 C10 H27 359.3 359.9
C11 C10 H27 C9 180.0 180.0
H27 C10 C11 H26 359.3 359.9
H27 C10 C9 CL2 359.7 0.3