PDB Chemical Component 9PQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9PQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C4	C5	1.389	1.393
C4	C3	1.393	1.363
C5	C6	1.390	1.362
C3	C2	1.395	1.401
C6	C1	1.389	1.406
C15	C14	1.396	1.376
C15	C16	1.393	1.398
C14	C13	1.390	1.396
C2	C1	1.486	1.416
C2	C19	1.491	1.417
O24	C23	1.221	1.215
C1	C22	1.391	1.406
C23	C16	1.503	1.477
C23	N25	1.331	1.348
C16	C17	1.391	1.397
C13	C19	1.488	1.479
C13	C18	1.391	1.396
C19	C20	1.487	1.384
N25	C26	1.453	1.466
C26	C27	1.526	1.530
C22	C21	1.395	1.362
C17	C18	1.386	1.376
C20	C21	1.400	1.391
C20	C28	1.514	1.507
C11	C12	1.524	1.531
C11	O10	1.427	1.430
N7	C12	1.475	1.471
N7	C27	1.474	1.469
N7	C8	1.471	1.470
C28	O29	1.427	1.429
C9	O10	1.429	1.431
C9	C8	1.527	1.531
N25	H1	1.000	0.970
C26	H2	1.101	1.090
C26	H3	1.100	1.090
C27	H4	1.100	1.090
C27	H5	1.100	1.091
C12	H7	1.100	1.090
C12	H8	1.100	1.090
C11	H9	1.100	1.090
C11	H10	1.100	1.090
C9	H11	1.101	1.090
C9	H12	1.100	1.090
C8	H13	1.100	1.089
C8	H14	1.100	1.090
C15	H15	1.080	1.080
C14	H16	1.080	1.080
C17	H17	1.080	1.080
C18	H18	1.080	1.080
C28	H19	1.100	1.090
C28	H20	1.100	1.090
O29	H21	0.950	0.967
C21	H22	1.080	1.080
C22	H23	1.080	1.080
C6	H24	1.080	1.079
C5	H25	1.080	1.080
C4	H26	1.080	1.080
C3	H27	1.080	1.080

Bond Angles for 9PQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C4	C5	H25	119.4	119.5
C3	C4	H26	119.3	119.6
C4	C3	H27	120.2	120.1
C5	C6	H24	120.2	120.2
C15	C14	C13	119.9	120.0
C14	C15	H15	119.8	120.0
C15	C14	H16	120.1	120.0
C15	C16	C17	119.4	120.0
C14	C13	C19	122.8	120.0
C14	C13	C18	119.7	120.0
C13	C14	H16	120.1	120.0
C2	C1	C22	120.7	119.6
C2	C19	C20	117.6	119.3
O24	C23	C16	120.3	120.0
O24	C23	N25	122.0	120.0
C1	C22	H23	119.2	120.0
N25	C23	C16	117.7	120.0
C23	C16	C17	119.6	120.0
C23	N25	C26	129.6	120.0
C23	N25	H1	115.2	120.1
C16	C17	C18	120.3	119.9
C16	C17	H17	119.9	120.0
C13	C19	C20	120.7	120.4
C13	C18	H18	119.8	120.0
C19	C20	C21	120.0	120.7
C19	C20	C28	119.4	119.7
N25	C26	C27	108.8	109.5
C26	N25	H1	115.2	120.0
N25	C26	H2	109.7	109.5
N25	C26	H3	109.6	109.5
C27	C26	H2	109.6	109.5
C27	C26	H3	109.6	109.5
C26	C27	H4	109.7	109.5
C26	C27	H5	109.7	109.4
C22	C21	H22	118.8	119.4
C18	C17	H17	119.8	120.0
C17	C18	H18	119.8	120.0
C28	C20	C21	120.6	119.7
C20	C21	H22	118.8	119.4
C20	C28	O29	111.1	109.5
C20	C28	H19	109.1	109.4
C20	C28	H20	109.1	109.5
C11	C12	H7	109.5	109.5
C11	C12	H8	109.5	109.6
O10	C11	H9	109.5	109.5
O10	C11	H10	109.5	109.5
C12	N7	C8	109.2	110.7
N7	C12	H7	109.5	109.5
N7	C12	H8	109.5	109.5
N7	C27	H4	109.7	109.5
N7	C27	H5	109.7	109.5
N7	C8	C9	109.2	109.3
N7	C8	H13	109.5	109.5
N7	C8	H14	109.5	109.5
O29	C28	H19	109.0	109.4
O29	C28	H20	109.1	109.5
C28	O29	H21	109.5	114.0
C8	C9	H11	109.3	109.5
C8	C9	H12	109.3	109.5
C9	C8	H13	109.5	109.5
C9	C8	H14	109.6	109.5
H2	C26	H3	109.5	109.4
H4	C27	H5	109.5	109.5
H7	C12	H8	109.4	109.5
H9	C11	H10	109.5	109.5
H11	C9	H12	109.5	109.5
H13	C8	H14	109.5	109.6
H19	C28	H20	109.5	109.5

Torsion Angles for 9PQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	C5	C6	H24	180.0	180.1
C3	C4	C5	H25	180.2	180.0
C6	C1	C22	H23	0.1	0.1
C14	C15	C16	C17	0.1	0.3
C15	C14	C13	C19	179.3	180.0
C15	C14	C13	C18	1.0	359.7
C13	C14	C15	H16	180.0	180.1
C23	C16	C15	C17	179.3	179.7
C15	C16	C17	C18	359.7	359.6
C15	C16	C17	H17	179.7	179.8
C13	C14	C15	H15	179.5	180.0
C15	C14	C13	H16	180.0	179.9
C14	C13	C19	C20	297.7	64.9
C14	C13	C18	H18	178.9	180.3
C1	C2	C19	C20	0.6	0.3
C2	C1	C22	H23	179.9	180.0
C13	C19	C2	C20	178.2	179.7
C2	C19	C20	C21	359.2	359.7
C2	C19	C20	C28	179.6	179.7
N25	C23	O24	C16	179.5	180.2
O24	C23	C16	C17	195.2	359.9
O24	C23	N25	C26	359.6	0.0
O24	C23	N25	H1	179.5	180.0
C1	C22	C21	H22	179.8	180.4
C15	C16	C23	C17	180.7	180.3
O24	C23	C16	N25	179.5	180.2
C16	C23	N25	C26	179.1	180.3
C16	C23	N25	H1	359.1	0.2
C23	C16	C17	C18	180.4	180.0
C23	C16	C17	H17	0.4	0.1
O24	C23	N25	C16	180.5	179.8
N25	C23	C16	C17	15.7	179.7
C23	N25	C26	C27	71.9	180.0
C26	N25	C23	H1	180.0	180.0
C23	N25	C26	H2	191.8	300.0
C23	N25	C26	H3	312.0	60.0
C18	C17	C16	H17	180.0	179.9
C16	C17	C18	H18	180.8	180.0
C14	C13	C19	C18	181.7	179.7
C19	C13	C14	H16	359.3	0.1
C2	C19	C13	C20	181.9	180.3
C19	C13	C18	H18	0.5	0.0
C13	C19	C20	C21	180.9	180.0
C13	C19	C20	C28	1.4	0.0
C14	C13	C18	C19	178.4	180.3
C18	C13	C14	H16	181.0	179.7
C13	C18	C17	H17	180.8	179.9
C17	C18	C13	H18	180.0	179.9
C28	C20	C19	C21	180.4	180.0
C19	C20	C21	H22	180.7	180.0
C19	C20	C28	O29	203.0	180.0
C19	C20	C28	H19	323.3	300.0
C19	C20	C28	H20	82.7	60.0
C26	N25	C23	C16	179.1	180.3
C23	N25	C26	H1	180.0	180.0
C27	C26	N25	H2	240.1	239.9
C27	C26	N25	H3	119.9	120.0
N25	C26	C27	H4	320.1	300.0
N25	C26	C27	H5	80.4	60.1
H2	C26	N25	H3	239.8	240.0
C27	C26	N25	H1	251.9	360.0
N25	C26	C27	H2	119.9	120.0
N25	C26	C27	H3	240.1	240.0
N7	C27	C26	H4	240.2	240.0
N7	C27	C26	H5	119.8	119.9
H2	C26	C27	H3	120.2	120.0
H4	C27	C26	H5	239.7	239.9
C2	C1	C22	C21	359.9	359.7
C20	C21	C22	H22	180.0	180.0
C14	C13	C18	C17	358.9	0.3
C16	C17	C18	H17	180.0	180.1
C13	C18	C17	H18	180.0	180.1
C19	C20	C21	C28	180.5	180.0
C22	C21	C20	H22	180.0	180.0
C21	C20	C28	O29	23.5	0.0
C21	C20	C28	H19	143.7	120.0
C21	C20	C28	H20	263.2	240.0
C19	C20	C28	C21	179.6	180.0
C28	C20	C21	H22	0.3	359.9
O29	C28	C20	H19	239.8	240.1
O29	C28	C20	H20	120.3	120.0
C20	C28	O29	H21	180.0	180.0
H19	C28	C20	H20	240.5	240.0
C11	C12	N7	C8	299.8	301.4
N7	C12	C11	H7	240.0	119.9
N7	C12	C11	H8	120.0	240.0
H7	C12	C11	H8	240.0	120.1
O10	C11	C12	H7	178.5	296.9
O10	C11	C12	H8	298.5	176.8
H9	C11	O10	H10	120.0	120.1
C11	C12	N7	H7	120.0	240.1
C11	C12	N7	H8	240.0	120.0
C12	N7	C27	H4	165.6	70.0
C12	N7	C27	H5	45.2	309.9
C12	N7	C8	C9	59.2	58.6
C12	N7	C8	H13	179.2	178.5
C12	N7	C8	H14	299.3	298.7
H7	C12	N7	H8	120.0	240.0
N7	C27	C26	H2	80.3	60.0
N7	C27	C26	H3	320.1	300.0
C26	C27	N7	H4	119.8	120.0
C26	C27	N7	H5	240.2	240.1
H4	C27	N7	H5	120.3	120.1
C8	N7	C12	H7	179.8	61.4
C8	N7	C12	H8	59.8	181.4
C8	N7	C27	H4	44.3	306.4
C8	N7	C27	H5	284.0	186.3
N7	C8	C9	H11	182.7	183.2
N7	C8	C9	H12	62.9	63.1
C9	C8	N7	H13	240.1	240.1
C9	C8	N7	H14	120.0	119.9
H13	C8	N7	H14	239.9	239.8
O29	C28	C20	C21	23.5	0.0
C20	C28	O29	H19	120.2	119.9
C20	C28	O29	H20	239.7	240.0
H19	C28	O29	H20	119.5	120.1
C9	O10	C11	H9	182.0	181.4
C9	O10	C11	H10	61.9	61.3
N7	C8	C9	O10	302.8	303.2
N7	C8	C9	H13	119.9	119.9
N7	C8	C9	H14	240.0	240.1
H11	C9	C8	H12	119.8	120.1
H13	C8	C9	H14	120.1	120.2
H1	N25	C23	C16	359.1	0.2
C23	N25	H1	C26	180.0	180.0
H1	N25	C26	C27	251.9	360.0
H1	N25	C26	H2	11.8	120.1
H1	N25	C26	H3	132.1	240.0
N25	C26	H2	C27	240.6	240.0
H2	C26	N25	H1	11.8	120.1
N25	C26	H2	H3	120.3	120.0
C27	C26	H2	H3	239.7	240.0
H2	C26	C27	H4	200.1	180.0
H2	C26	C27	H5	320.5	300.0
N25	C26	H3	C27	119.4	120.0
H3	C26	N25	H1	132.1	240.0
N25	C26	H3	H2	239.7	240.0
C27	C26	H3	H2	120.3	120.0
H3	C26	C27	H4	79.9	60.0
H3	C26	C27	H5	200.3	180.0
H4	C27	C26	H2	200.1	180.0
H4	C27	C26	H3	79.9	60.0
C26	C27	H4	H5	120.5	120.0
N7	C27	H4	H5	239.5	240.0
H5	C27	C26	H2	320.5	300.0
H5	C27	C26	H3	200.3	180.0
C26	C27	H5	H4	239.5	240.0
N7	C27	H5	H4	120.5	120.0
C11	C12	H7	H8	120.1	239.9
H7	C12	N7	C8	179.8	61.4
N7	C12	H7	H8	240.0	120.1
C11	C12	H8	H7	240.0	120.1
H8	C12	N7	C8	59.8	181.4
N7	C12	H8	H7	120.0	240.0
H9	C11	C12	H7	298.4	56.9
H9	C11	C12	H8	58.4	296.8
O10	C11	H9	H10	240.0	239.9
H10	C11	C12	H7	58.5	177.0
H10	C11	C12	H8	178.5	56.9
O10	C11	H10	H9	120.0	120.1
C8	C9	H11	H12	240.3	239.9
H11	C9	C8	H13	62.8	63.3
H11	C9	C8	H14	302.7	303.1
C8	C9	H12	H11	119.7	120.1
H12	C9	C8	H13	303.0	303.2
H12	C9	C8	H14	182.9	183.0
N7	C8	H13	C9	240.3	240.2
N7	C8	H13	H14	120.1	120.1
H13	C8	C9	H11	62.8	63.3
H13	C8	C9	H12	303.0	303.2
C9	C8	H13	H14	239.8	239.9
N7	C8	H14	C9	119.7	119.8
N7	C8	H14	H13	239.9	239.9
H14	C8	C9	H11	302.7	303.1
H14	C8	C9	H12	182.9	183.0
C9	C8	H14	H13	120.2	120.1
H15	C15	C14	C13	179.5	180.0
H15	C15	C14	H16	359.5	359.9
H15	C15	C16	C17	180.2	180.3
C15	C14	H16	C13	180.0	180.1
H16	C14	C15	H15	359.5	359.9
H16	C14	C13	C19	359.3	0.1
H16	C14	C13	C18	181.0	179.7
C16	C17	H17	C18	180.0	179.9
H17	C17	C18	H18	0.8	359.9
H18	C18	C17	H17	0.8	359.9
H19	C28	C20	C21	143.7	120.0
C20	C28	H19	O29	238.5	240.0
C20	C28	H19	H20	119.2	120.0
O29	C28	H19	H20	240.8	240.0
H19	C28	O29	H21	59.7	60.1
H20	C28	C20	C21	263.2	240.0
C20	C28	H20	O29	121.5	120.0
C20	C28	H20	H19	240.8	240.0
O29	C28	H20	H19	119.2	120.0
H20	C28	O29	H21	300.2	300.0
H21	O29	C28	H19	59.7	60.1
H21	O29	C28	H20	300.2	300.0
H23	C22	C21	H22	359.8	360.0
H25	C5	C6	H24	360.0	360.0
H26	C4	C5	H25	0.2	0.0
H26	C4	C3	H27	359.8	360.0
H27	C3	C4	H26	359.8	360.0