PDB Chemical Component 9PP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9PP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N9	C8	1.400	1.365
N9	C4	1.401	1.372
N9	C10	1.408	1.465
C8	N7	1.344	1.301
C8	H81	1.080	1.081
N7	C5	1.400	1.356
C5	C6	1.478	1.406
C5	C4	1.414	1.405
C6	N6	1.256	1.383
C6	N1	1.442	1.328
N6	HN61	1.000	0.970
N6	HN62	1.000	0.971
N1	C2	1.411	1.326
C2	N2	1.348	1.386
C2	N3	1.381	1.323
N2	HN21	1.000	0.970
N2	HN22	1.000	0.970
N3	C4	1.388	1.329
C10	C11	1.543	1.530
C10	H101	1.100	1.090
C10	H102	1.100	1.091
C11	C12	1.532	1.530
C11	O13	1.464	1.429
C11	H111	1.100	1.089
C12	H121	1.100	1.090
C12	H122	1.099	1.090
C12	H123	1.100	1.089
O13	C14	1.470	1.430
P	C14	1.560	1.823
P	O2P	1.475	1.567
P	O3P	1.513	1.566
P	O1P	1.478	1.567
C14	H141	1.100	1.090
C14	H142	1.100	1.090

Bond Angles for 9PP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C8	N9	C4	107.7	107.4
C8	N9	C10	127.5	126.3
N9	C8	N7	110.3	110.0
N9	C8	H81	124.9	125.0
C4	N9	C10	124.8	126.3
N9	C4	C5	105.7	106.0
N9	C4	N3	126.7	134.8
N9	C10	C11	116.0	109.5
N9	C10	H101	105.8	109.5
N9	C10	H102	107.3	109.5
N7	C8	H81	124.8	125.0
C8	N7	C5	107.2	109.4
N7	C5	C6	132.5	134.6
N7	C5	C4	109.1	107.1
C6	C5	C4	118.4	118.3
C5	C6	N6	127.7	120.7
C5	C6	N1	113.0	118.6
C5	C4	N3	127.6	119.1
N6	C6	N1	119.2	120.7
C6	N6	HN61	124.3	120.0
C6	N6	HN62	111.5	120.0
C6	N1	C2	124.0	121.1
HN61	N6	HN62	124.3	119.9
N1	C2	N2	118.3	118.9
N1	C2	N3	123.0	122.3
N2	C2	N3	118.7	118.9
C2	N2	HN21	125.5	120.0
C2	N2	HN22	109.0	120.0
C2	N3	C4	114.0	120.6
HN21	N2	HN22	125.5	120.0
C11	C10	H101	105.8	109.5
C11	C10	H102	107.3	109.5
C10	C11	C12	107.3	109.5
C10	C11	O13	109.5	109.5
C10	C11	H111	110.6	109.5
H101	C10	H102	114.8	109.4
C12	C11	O13	108.6	109.4
C12	C11	H111	111.5	109.5
C11	C12	H121	109.5	109.4
C11	C12	H122	109.5	109.5
C11	C12	H123	109.5	109.5
O13	C11	H111	109.3	109.5
C11	O13	C14	113.4	106.8
H121	C12	H122	109.5	109.4
H121	C12	H123	109.4	109.5
H122	C12	H123	109.5	109.5
O13	C14	P	113.4	109.5
O13	C14	H141	107.3	109.5
O13	C14	H142	108.2	109.5
C14	P	O2P	110.0	109.5
C14	P	O3P	111.8	109.4
C14	P	O1P	110.8	109.5
P	C14	H141	107.3	109.5
P	C14	H142	108.2	109.5
O2P	P	O3P	106.7	109.5
O2P	P	O1P	110.0	109.5
O3P	P	O1P	107.5	109.5
H141	C14	H142	112.6	109.4

Torsion Angles for 9PP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	N9	C8	C10	178.9	180.3
C8	N9	C4	C5	359.8	359.6
C8	N9	C4	N3	180.2	180.5
C8	N9	C10	C11	300.3	265.0
C8	N9	C10	H101	183.3	145.0
C8	N9	C10	H102	60.3	25.0
N7	C8	N9	H81	180.0	180.0
N9	C8	N7	C5	0.1	0.1
C8	N9	C4	C10	181.0	179.7
C4	N9	C8	N7	0.1	0.2
C4	N9	C8	H81	180.1	180.2
C4	N9	C10	C11	121.5	84.7
C4	N9	C10	H101	4.6	324.7
C4	N9	C10	H102	241.5	204.7
N7	C5	C4	N9	0.3	0.4
C6	C5	C4	N9	180.3	180.2
C5	C4	N9	N3	179.6	179.2
C2	N3	C4	N9	179.3	179.6
C8	N9	C10	C4	178.7	180.3
C10	N9	C8	N7	181.2	179.9
C10	N9	C8	H81	1.2	359.9
C10	N9	C4	C5	178.7	179.9
C10	N9	C4	N3	359.1	0.7
C11	C10	N9	H101	117.0	120.0
C11	C10	N9	H102	240.0	240.0
N9	C10	C11	C12	289.1	185.0
N9	C10	C11	O13	171.5	65.0
N9	C10	C11	H111	51.0	305.0
H101	C10	N9	H102	123.0	120.0
N7	C8	N9	C4	0.1	0.2
N7	C8	N9	C10	181.2	179.9
N9	C8	N7	H81	180.0	180.0
C8	N7	C5	C6	179.7	180.0
C8	N7	C5	C4	359.8	359.7
H81	C8	N9	C4	180.1	180.2
H81	C8	N9	C10	1.2	359.9
N9	C8	H81	N7	180.0	180.0
H81	C8	N7	C5	180.1	180.1
N9	C4	C5	N7	0.3	0.4
C5	N7	C8	H81	180.1	180.1
C6	C5	N7	C4	180.0	180.3
N7	C5	C6	N6	0.1	360.0
N7	C5	C6	N1	180.3	179.9
N7	C5	C4	N3	179.9	179.7
N9	C4	C5	C6	180.3	180.2
N7	C5	C6	C4	180.1	179.7
C6	C5	C4	N3	359.9	359.5
N6	C6	C5	N1	179.8	180.1
C5	C6	N6	HN61	360.0	360.0
C5	C6	N6	HN62	180.0	180.0
C5	C6	N1	C2	359.7	0.0
C5	C4	N9	C10	178.7	179.9
N9	C4	C5	N3	180.4	180.7
N7	C5	C4	C6	180.0	180.2
C4	C5	C6	N6	180.1	180.3
C4	C5	C6	N1	0.3	0.3
C2	N3	C4	C5	359.8	0.5
N6	C6	C5	C4	180.1	180.3
C5	C6	N6	N1	180.2	179.9
N6	C6	N1	C2	179.9	180.0
HN61	N6	C6	HN62	180.0	180.0
N1	C6	C5	C4	0.3	0.3
C5	C6	N1	N6	179.8	180.1
N1	C6	N6	HN61	179.8	180.0
N1	C6	N6	HN62	359.8	0.1
C6	N1	C2	N2	179.8	180.0
C6	N1	C2	N3	360.0	359.9
HN61	N6	C6	N1	179.8	180.0
C6	N6	HN61	HN62	180.0	180.0
HN62	N6	C6	N1	359.8	0.1
C6	N6	HN62	HN61	180.0	180.0
N2	C2	N1	N3	179.8	180.1
N1	C2	N2	HN21	360.0	359.9
N1	C2	N2	HN22	180.0	180.1
N1	C2	N3	C4	0.2	359.8
N1	C2	N2	N3	180.2	179.9
N2	C2	N3	C4	180.4	179.7
HN21	N2	C2	HN22	180.0	179.9
N9	C4	N3	C2	179.3	179.6
C5	C4	N3	C2	359.8	0.5
N1	C2	N3	N2	179.8	180.1
N3	C2	N2	HN21	179.8	180.0
N3	C2	N2	HN22	359.8	0.1
HN21	N2	C2	N3	179.8	180.0
C2	N2	HN21	HN22	180.0	180.1
HN22	N2	C2	N3	359.8	0.1
C2	N2	HN22	HN21	180.0	179.9
N3	C4	N9	C10	359.1	0.7
N9	C4	N3	C5	179.5	179.1
N9	C10	C11	H101	243.0	240.0
N9	C10	C11	H102	120.0	120.0
H101	C10	C11	H102	237.0	240.0
C12	C11	C10	O13	117.6	119.9
C12	C11	C10	H111	238.2	240.0
C10	C11	C12	H121	296.0	60.1
C10	C11	C12	H122	175.9	180.0
C10	C11	C12	H123	55.9	300.0
O13	C11	C10	H111	120.6	120.0
C10	C11	O13	C14	273.6	210.0
N9	C10	H101	C11	123.7	120.0
N9	C10	H101	H102	241.8	240.0
C11	C10	H101	H102	118.2	120.0
H101	C10	C11	C12	46.1	305.0
H101	C10	C11	O13	288.5	185.1
H101	C10	C11	H111	168.0	65.0
N9	C10	H102	C11	234.6	240.0
N9	C10	H102	H101	117.3	120.0
C11	C10	H102	H101	242.7	240.0
H102	C10	C11	C12	169.2	65.0
H102	C10	C11	O13	51.6	305.0
H102	C10	C11	H111	291.0	185.0
C12	C11	C10	H101	46.1	305.0
C12	C11	C10	H102	169.2	65.0
C10	C11	C12	O13	241.8	240.0
C10	C11	C12	H111	121.3	120.0
O13	C11	C12	H111	239.5	240.0
C12	C11	O13	C14	156.8	90.0
H121	C12	C11	H122	120.0	240.1
H121	C12	C11	H123	240.0	120.0
H122	C12	C11	H123	120.0	239.9
O13	C11	C10	H101	288.5	185.1
O13	C11	C10	H102	51.6	305.0
C10	C11	O13	C12	116.8	120.0
C10	C11	O13	H111	238.7	240.0
C12	C11	O13	H111	121.8	120.0
O13	C11	C12	H121	54.2	180.0
O13	C11	C12	H122	294.2	299.9
O13	C11	C12	H123	174.2	60.0
C11	O13	C14	P	162.1	75.0
C11	O13	C14	H141	43.8	195.0
C11	O13	C14	H142	282.1	315.0
H111	C11	C10	H101	168.0	65.0
H111	C11	C10	H102	291.0	185.0
C10	C11	H111	C12	240.7	240.0
C10	C11	H111	O13	120.7	120.0
C12	C11	H111	O13	239.9	240.0
H111	C11	C12	H121	174.7	300.0
H111	C11	C12	H122	54.7	59.9
H111	C11	C12	H123	294.7	180.0
H111	C11	O13	C14	35.0	330.0
H121	C12	C11	O13	54.2	180.0
H121	C12	C11	H111	174.7	300.0
C11	C12	H121	H122	240.0	119.9
C11	C12	H121	H123	120.0	240.0
H122	C12	H121	H123	240.0	120.0
H122	C12	C11	O13	294.2	299.9
H122	C12	C11	H111	54.7	59.9
C11	C12	H122	H121	120.0	240.1
C11	C12	H122	H123	240.0	120.1
H121	C12	H122	H123	120.0	240.0
H123	C12	C11	O13	174.2	60.0
H123	C12	C11	H111	294.7	180.0
C11	C12	H123	H121	240.0	120.0
C11	C12	H123	H122	120.0	240.0
H121	C12	H123	H122	240.0	120.0
C14	O13	C11	H111	35.0	330.0
O13	C14	P	O2P	184.6	60.0
O13	C14	P	O3P	302.9	180.0
O13	C14	P	O1P	62.8	300.0
P	C14	O13	H141	118.3	240.0
P	C14	O13	H142	240.0	120.0
H141	C14	O13	H142	121.7	240.0
O13	C14	P	H141	241.7	120.0
O13	C14	P	H142	120.0	240.0
O2P	P	C14	O3P	241.6	240.0
O2P	P	C14	O1P	121.8	120.0
O3P	P	C14	O1P	240.1	240.0
H141	C14	P	H142	238.3	120.0
C14	P	O2P	O3P	121.4	120.0
C14	P	O2P	O1P	237.8	240.0
O2P	P	C14	H141	302.9	300.0
O2P	P	C14	H142	64.6	180.0
O3P	P	O2P	O1P	116.3	120.0
C14	P	O3P	O2P	239.7	240.0
C14	P	O3P	O1P	121.8	120.0
O3P	P	C14	H141	61.2	60.0
O3P	P	C14	H142	182.9	300.0
O2P	P	O3P	O1P	242.0	240.0
C14	P	O1P	O2P	121.8	120.0
C14	P	O1P	O3P	237.6	240.0
O1P	P	C14	H141	181.1	180.0
O1P	P	C14	H142	302.8	60.0
O2P	P	O1P	O3P	115.8	120.0
O13	C14	H141	P	122.1	240.0
O13	C14	H141	H142	241.1	120.0
H141	C14	P	O2P	302.9	300.0
H141	C14	P	O3P	61.2	60.0
H141	C14	P	O1P	181.1	180.0
P	C14	H141	H142	118.9	240.0
O13	C14	H142	P	236.8	120.0
O13	C14	H142	H141	118.4	240.0
H142	C14	P	O2P	64.6	180.0
H142	C14	P	O3P	182.9	300.0
H142	C14	P	O1P	302.8	60.0
P	C14	H142	H141	241.6	120.0