PDB Chemical Component 9PM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9PM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C04 |
C03 |
1.388 |
1.362 |
| C04 |
C05 |
1.390 |
1.410 |
| C03 |
C02 |
1.404 |
1.403 |
| C06 |
C05 |
1.396 |
1.403 |
| C06 |
C07 |
1.395 |
1.362 |
| C05 |
C10 |
1.396 |
1.417 |
| C02 |
N02 |
1.359 |
1.387 |
| C02 |
N01 |
1.351 |
1.317 |
| C07 |
C08 |
1.397 |
1.392 |
| C10 |
N01 |
1.353 |
1.338 |
| C10 |
C09 |
1.385 |
1.405 |
| C08 |
C09 |
1.390 |
1.362 |
| C08 |
C11 |
1.511 |
1.507 |
| N12 |
C11 |
1.462 |
1.469 |
| N12 |
C13 |
1.469 |
1.469 |
| C13 |
C14 |
1.523 |
1.531 |
| C14 |
C21 |
1.507 |
1.507 |
| C22 |
C21 |
1.391 |
1.383 |
| C22 |
C23 |
1.387 |
1.381 |
| C21 |
C26 |
1.387 |
1.384 |
| CL2 |
C23 |
1.789 |
1.736 |
| C23 |
C24 |
1.402 |
1.397 |
| C26 |
C25 |
1.389 |
1.379 |
| C24 |
C25 |
1.382 |
1.397 |
| C24 |
C27 |
1.285 |
1.432 |
| C27 |
N28 |
1.157 |
1.136 |
| C22 |
H1 |
1.080 |
1.079 |
| C25 |
H2 |
1.080 |
1.079 |
| C26 |
H3 |
1.080 |
1.080 |
| C14 |
H4 |
1.100 |
1.090 |
| C14 |
H5 |
1.100 |
1.090 |
| C13 |
H6 |
1.099 |
1.089 |
| C13 |
H7 |
1.100 |
1.090 |
| N12 |
H8 |
0.999 |
1.009 |
| C11 |
H10 |
1.100 |
1.090 |
| C11 |
H11 |
1.100 |
1.091 |
| C09 |
H12 |
1.080 |
1.080 |
| C07 |
H13 |
1.080 |
1.080 |
| C06 |
H14 |
1.080 |
1.080 |
| C04 |
H15 |
1.080 |
1.080 |
| C03 |
H16 |
1.080 |
1.080 |
| N02 |
H17 |
1.000 |
0.970 |
| N02 |
H18 |
1.000 |
0.970 |
Bond Angles for 9PM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C04 |
C03 |
C02 |
119.9 |
119.9 |
| C03 |
C04 |
H15 |
120.3 |
120.8 |
| C04 |
C03 |
H16 |
120.0 |
120.1 |
| C04 |
C05 |
C10 |
118.9 |
119.1 |
| C03 |
C02 |
N02 |
121.3 |
119.2 |
| C03 |
C02 |
N01 |
119.6 |
121.5 |
| C02 |
C03 |
H16 |
120.1 |
120.0 |
| C06 |
C05 |
C10 |
120.3 |
119.6 |
| C05 |
C06 |
H14 |
120.2 |
120.2 |
| C06 |
C07 |
H13 |
120.2 |
119.5 |
| C05 |
C10 |
N01 |
120.9 |
119.9 |
| N02 |
C02 |
N01 |
119.1 |
119.3 |
| C02 |
N02 |
H17 |
109.5 |
120.0 |
| C02 |
N02 |
H18 |
109.5 |
120.0 |
| C10 |
C09 |
H12 |
119.9 |
120.1 |
| C08 |
C09 |
H12 |
120.0 |
120.1 |
| C08 |
C11 |
H10 |
108.2 |
109.5 |
| C08 |
C11 |
H11 |
108.2 |
109.5 |
| C11 |
N12 |
H8 |
110.2 |
111.0 |
| N12 |
C11 |
H10 |
108.2 |
109.4 |
| N12 |
C11 |
H11 |
108.2 |
109.5 |
| N12 |
C13 |
H6 |
109.3 |
109.5 |
| N12 |
C13 |
H7 |
109.3 |
109.5 |
| C13 |
C14 |
H4 |
110.1 |
109.5 |
| C13 |
C14 |
H5 |
110.1 |
109.5 |
| C22 |
C21 |
C26 |
120.3 |
120.4 |
| C21 |
C22 |
H1 |
120.0 |
119.9 |
| C21 |
C26 |
H3 |
120.0 |
119.9 |
| C23 |
C24 |
C25 |
120.3 |
119.7 |
| C26 |
C25 |
H2 |
120.0 |
120.1 |
| C24 |
C25 |
H2 |
120.0 |
120.1 |
| H4 |
C14 |
H5 |
109.5 |
109.5 |
| H6 |
C13 |
H7 |
109.5 |
109.5 |
| H10 |
C11 |
H11 |
109.4 |
109.4 |
| H17 |
N02 |
H18 |
109.4 |
120.0 |
Torsion Angles for 9PM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C03 |
C04 |
C05 |
C10 |
0.2 |
0.3 |
| C04 |
C03 |
C02 |
N02 |
180.5 |
180.0 |
| C04 |
C03 |
C02 |
N01 |
1.4 |
0.0 |
| C02 |
C03 |
C04 |
H16 |
180.0 |
180.0 |
| C06 |
C05 |
C04 |
C10 |
179.9 |
179.7 |
| C04 |
C05 |
C06 |
H14 |
359.4 |
0.3 |
| C04 |
C05 |
C10 |
N01 |
0.2 |
359.4 |
| C02 |
C03 |
C04 |
H15 |
179.0 |
180.0 |
| C04 |
C03 |
C02 |
H16 |
180.0 |
180.0 |
| N02 |
C02 |
C03 |
N01 |
179.1 |
180.0 |
| C03 |
C02 |
N02 |
H17 |
180.9 |
0.0 |
| C03 |
C02 |
N02 |
H18 |
300.9 |
180.0 |
| C04 |
C05 |
C06 |
C10 |
180.1 |
180.3 |
| C05 |
C06 |
C07 |
H13 |
180.1 |
180.0 |
| C06 |
C05 |
C10 |
N01 |
180.3 |
179.7 |
| C10 |
C05 |
C06 |
H14 |
179.3 |
180.0 |
| C05 |
C10 |
C09 |
H12 |
178.4 |
179.5 |
| C03 |
C02 |
N02 |
N01 |
180.9 |
180.0 |
| N02 |
C02 |
C03 |
H16 |
0.5 |
0.0 |
| H17 |
N02 |
C02 |
H18 |
240.0 |
180.0 |
| C03 |
C02 |
N01 |
N02 |
179.1 |
180.0 |
| N01 |
C02 |
C03 |
H16 |
181.4 |
180.0 |
| C05 |
C10 |
N01 |
C02 |
0.2 |
0.6 |
| N01 |
C02 |
N02 |
H17 |
0.0 |
180.0 |
| N01 |
C02 |
N02 |
H18 |
120.0 |
360.0 |
| C07 |
C08 |
C09 |
H12 |
181.0 |
180.2 |
| C07 |
C08 |
C11 |
H10 |
114.9 |
149.7 |
| C07 |
C08 |
C11 |
H11 |
233.3 |
29.8 |
| N01 |
C10 |
C09 |
H12 |
359.6 |
0.3 |
| C08 |
C09 |
C10 |
H12 |
180.0 |
180.0 |
| C10 |
C09 |
C08 |
H12 |
180.0 |
180.0 |
| C09 |
C08 |
C11 |
H10 |
295.1 |
330.0 |
| C09 |
C08 |
C11 |
H11 |
53.6 |
210.0 |
| C08 |
C11 |
N12 |
H8 |
288.8 |
304.0 |
| N12 |
C11 |
C08 |
H10 |
239.3 |
120.0 |
| N12 |
C11 |
C08 |
H11 |
120.8 |
240.0 |
| H10 |
C11 |
C08 |
H11 |
241.5 |
120.0 |
| C08 |
C11 |
N12 |
H10 |
120.8 |
239.9 |
| C08 |
C11 |
N12 |
H11 |
239.2 |
120.0 |
| C11 |
N12 |
C13 |
H6 |
217.9 |
60.0 |
| C11 |
N12 |
C13 |
H7 |
337.7 |
300.0 |
| H10 |
C11 |
N12 |
H11 |
118.5 |
240.1 |
| N12 |
C13 |
C14 |
H4 |
284.1 |
60.0 |
| N12 |
C13 |
C14 |
H5 |
44.9 |
300.0 |
| H6 |
C13 |
N12 |
H7 |
240.2 |
120.1 |
| H4 |
C14 |
C13 |
H5 |
239.2 |
120.0 |
| C14 |
C21 |
C22 |
H1 |
359.3 |
360.0 |
| C14 |
C21 |
C26 |
H3 |
0.7 |
0.3 |
| C22 |
C21 |
C26 |
H3 |
179.5 |
180.0 |
| C22 |
C23 |
C24 |
C25 |
359.7 |
360.0 |
| C26 |
C21 |
C22 |
H1 |
180.5 |
180.3 |
| C21 |
C26 |
C25 |
H2 |
180.0 |
180.5 |
| CL2 |
C23 |
C24 |
C25 |
180.0 |
180.0 |
| C23 |
C24 |
C25 |
H2 |
180.3 |
179.7 |
| C22 |
C21 |
C26 |
C25 |
359.5 |
359.5 |
| C24 |
C25 |
C26 |
H2 |
180.0 |
180.0 |
| C26 |
C25 |
C24 |
H2 |
180.0 |
180.0 |
| H1 |
C22 |
C21 |
C26 |
180.5 |
180.3 |
| H3 |
C26 |
C25 |
H2 |
0.1 |
0.0 |
| C13 |
C14 |
H4 |
H5 |
121.2 |
240.0 |
| C13 |
C14 |
H5 |
H4 |
238.8 |
120.0 |
| N12 |
C13 |
H6 |
H7 |
119.7 |
240.0 |
| H6 |
C13 |
C14 |
H4 |
164.0 |
180.0 |
| H6 |
C13 |
C14 |
H5 |
284.8 |
59.9 |
| N12 |
C13 |
H7 |
H6 |
240.3 |
120.0 |
| H7 |
C13 |
C14 |
H4 |
44.1 |
300.0 |
| H7 |
C13 |
C14 |
H5 |
164.9 |
180.0 |
| H8 |
N12 |
C11 |
H10 |
168.0 |
64.0 |
| H8 |
N12 |
C11 |
H11 |
49.6 |
184.0 |
| H8 |
N12 |
C13 |
H6 |
98.4 |
296.1 |
| H8 |
N12 |
C13 |
H7 |
218.2 |
176.0 |
| C08 |
C11 |
H10 |
H11 |
117.7 |
240.0 |
| H10 |
C11 |
N12 |
H8 |
168.0 |
64.0 |
| N12 |
C11 |
H10 |
H11 |
242.3 |
119.9 |
| C08 |
C11 |
H11 |
H10 |
242.3 |
120.0 |
| H11 |
C11 |
N12 |
H8 |
49.6 |
184.0 |
| N12 |
C11 |
H11 |
H10 |
117.7 |
240.1 |
| H14 |
C06 |
C05 |
C10 |
179.3 |
180.0 |
| H14 |
C06 |
C07 |
H13 |
0.1 |
359.7 |
| H15 |
C04 |
C03 |
C02 |
179.0 |
180.0 |
| H15 |
C04 |
C03 |
H16 |
359.0 |
360.0 |
| H15 |
C04 |
C05 |
C10 |
180.2 |
180.3 |
| C04 |
C03 |
H16 |
C02 |
180.0 |
180.0 |
| H16 |
C03 |
C04 |
H15 |
359.0 |
360.0 |
| H16 |
C03 |
C02 |
N02 |
0.5 |
0.0 |
| H16 |
C03 |
C02 |
N01 |
181.4 |
180.0 |
| H17 |
N02 |
C02 |
N01 |
0.0 |
180.0 |
| C02 |
N02 |
H17 |
H18 |
120.0 |
180.0 |
| H18 |
N02 |
C02 |
N01 |
120.0 |
360.0 |
| C02 |
N02 |
H18 |
H17 |
240.0 |
180.0 |