PDB Chemical Component 9P7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9P7
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C04 |
C03 |
1.392 |
1.363 |
| C04 |
C05 |
1.391 |
1.410 |
| C03 |
C02 |
1.389 |
1.402 |
| C06 |
C05 |
1.393 |
1.404 |
| C06 |
C07 |
1.402 |
1.361 |
| C05 |
C10 |
1.393 |
1.416 |
| C02 |
N02 |
1.349 |
1.387 |
| C02 |
N01 |
1.344 |
1.317 |
| C07 |
C08 |
1.396 |
1.394 |
| C10 |
N01 |
1.352 |
1.338 |
| C10 |
C09 |
1.385 |
1.405 |
| C08 |
C09 |
1.389 |
1.361 |
| C08 |
C11 |
1.520 |
1.507 |
| C11 |
N12 |
1.461 |
1.469 |
| N12 |
C13 |
1.473 |
1.469 |
| C13 |
C14 |
1.534 |
1.529 |
| C14 |
C21 |
1.504 |
1.507 |
| C22 |
C21 |
1.390 |
1.384 |
| C22 |
C23 |
1.383 |
1.379 |
| C27 |
C23 |
1.499 |
1.508 |
| C21 |
C26 |
1.385 |
1.383 |
| C23 |
C24 |
1.389 |
1.397 |
| C26 |
C25 |
1.399 |
1.380 |
| C24 |
C25 |
1.386 |
1.396 |
| C24 |
C28 |
1.281 |
1.432 |
| C28 |
N29 |
1.150 |
1.136 |
| C11 |
H1 |
1.100 |
1.090 |
| C11 |
H2 |
1.100 |
1.090 |
| C13 |
H3 |
1.100 |
1.090 |
| C13 |
H4 |
1.100 |
1.090 |
| C14 |
H5 |
1.100 |
1.090 |
| C14 |
H6 |
1.100 |
1.089 |
| C25 |
H7 |
1.080 |
1.079 |
| C27 |
H8 |
1.100 |
1.090 |
| C27 |
H9 |
1.100 |
1.090 |
| C27 |
H10 |
1.100 |
1.090 |
| C22 |
H11 |
1.080 |
1.080 |
| C26 |
H12 |
1.080 |
1.080 |
| N12 |
H13 |
1.001 |
1.009 |
| C09 |
H15 |
1.080 |
1.081 |
| C07 |
H16 |
1.080 |
1.080 |
| C06 |
H17 |
1.080 |
1.081 |
| C04 |
H18 |
1.080 |
1.080 |
| C03 |
H19 |
1.080 |
1.080 |
| N02 |
H20 |
1.000 |
0.970 |
| N02 |
H21 |
1.000 |
0.970 |
Bond Angles for 9P7
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C04 |
C03 |
C02 |
120.1 |
119.8 |
| C03 |
C04 |
H18 |
120.7 |
120.9 |
| C04 |
C03 |
H19 |
119.9 |
120.0 |
| C03 |
C02 |
N02 |
120.6 |
119.2 |
| C03 |
C02 |
N01 |
120.4 |
121.6 |
| C02 |
C03 |
H19 |
119.9 |
120.1 |
| C05 |
C06 |
H17 |
120.1 |
120.1 |
| C06 |
C07 |
H16 |
119.7 |
119.6 |
| C05 |
C10 |
N01 |
120.9 |
119.9 |
| N02 |
C02 |
N01 |
119.0 |
119.2 |
| C02 |
N02 |
H20 |
109.5 |
119.9 |
| C02 |
N02 |
H21 |
109.5 |
120.0 |
| C10 |
N01 |
C02 |
120.7 |
121.2 |
| C09 |
C10 |
N01 |
118.7 |
121.0 |
| C10 |
C09 |
C08 |
120.8 |
119.8 |
| C10 |
C09 |
H15 |
119.6 |
120.1 |
| C08 |
C09 |
H15 |
119.6 |
120.1 |
| C08 |
C11 |
H1 |
108.3 |
109.4 |
| C08 |
C11 |
H2 |
108.3 |
109.5 |
| C11 |
N12 |
C13 |
107.4 |
111.0 |
| N12 |
C11 |
H1 |
108.3 |
109.5 |
| N12 |
C11 |
H2 |
108.3 |
109.5 |
| C11 |
N12 |
H13 |
110.0 |
111.0 |
| N12 |
C13 |
H3 |
109.1 |
109.4 |
| N12 |
C13 |
H4 |
109.2 |
109.5 |
| C13 |
C14 |
C21 |
109.5 |
109.5 |
| C14 |
C13 |
H3 |
109.1 |
109.5 |
| C14 |
C13 |
H4 |
109.1 |
109.5 |
| C13 |
C14 |
H5 |
109.5 |
109.5 |
| C13 |
C14 |
H6 |
109.5 |
109.5 |
| C14 |
C21 |
C22 |
120.7 |
119.8 |
| C14 |
C21 |
C26 |
119.0 |
119.8 |
| C21 |
C14 |
H5 |
109.4 |
109.4 |
| C21 |
C14 |
H6 |
109.5 |
109.4 |
| C22 |
C21 |
C26 |
120.3 |
120.3 |
| C21 |
C22 |
H11 |
119.8 |
119.9 |
| C21 |
C26 |
H12 |
120.2 |
119.9 |
| C26 |
C25 |
H7 |
120.3 |
120.1 |
| C24 |
C25 |
H7 |
120.3 |
120.1 |
| H1 |
C11 |
H2 |
109.5 |
109.5 |
| H3 |
C13 |
H4 |
109.5 |
109.4 |
| H5 |
C14 |
H6 |
109.5 |
109.5 |
| H8 |
C27 |
H9 |
109.4 |
109.5 |
| H8 |
C27 |
H10 |
109.5 |
109.5 |
| H9 |
C27 |
H10 |
109.5 |
109.5 |
| H20 |
N02 |
H21 |
109.5 |
120.0 |
Torsion Angles for 9P7
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C04 |
C03 |
C02 |
N02 |
181.3 |
180.0 |
| C04 |
C03 |
C02 |
N01 |
1.6 |
360.0 |
| C02 |
C03 |
C04 |
H19 |
180.0 |
180.1 |
| C04 |
C05 |
C06 |
H17 |
0.3 |
0.1 |
| C04 |
C05 |
C10 |
N01 |
0.2 |
360.0 |
| C02 |
C03 |
C04 |
H18 |
178.5 |
180.0 |
| C04 |
C03 |
C02 |
H19 |
180.0 |
179.9 |
| N02 |
C02 |
C03 |
N01 |
179.7 |
180.1 |
| C03 |
C02 |
N02 |
H20 |
180.3 |
359.9 |
| C03 |
C02 |
N02 |
H21 |
300.3 |
180.0 |
| C10 |
N01 |
C02 |
C03 |
359.3 |
0.0 |
| C05 |
C06 |
C07 |
H16 |
179.2 |
180.0 |
| C06 |
C05 |
C10 |
N01 |
180.9 |
180.0 |
| C05 |
C10 |
N01 |
C02 |
359.8 |
360.0 |
| C09 |
C10 |
C05 |
N01 |
179.7 |
180.2 |
| C05 |
C10 |
C09 |
H15 |
180.2 |
179.7 |
| C03 |
C02 |
N02 |
N01 |
180.3 |
179.9 |
| N02 |
C02 |
C03 |
H19 |
1.3 |
0.1 |
| C10 |
N01 |
C02 |
N02 |
179.6 |
180.0 |
| H20 |
N02 |
C02 |
H21 |
240.0 |
179.9 |
| C03 |
C02 |
N01 |
N02 |
179.7 |
180.1 |
| N01 |
C02 |
C03 |
H19 |
181.6 |
180.1 |
| N01 |
C02 |
N02 |
H20 |
360.0 |
180.0 |
| N01 |
C02 |
N02 |
H21 |
120.0 |
0.1 |
| C09 |
C10 |
N01 |
C02 |
180.1 |
179.8 |
| C07 |
C08 |
C09 |
H15 |
178.7 |
180.0 |
| C07 |
C08 |
C11 |
H1 |
77.8 |
150.0 |
| C07 |
C08 |
C11 |
H2 |
196.4 |
30.0 |
| C03 |
C02 |
N01 |
C10 |
359.3 |
0.0 |
| N02 |
C02 |
N01 |
C10 |
179.6 |
180.0 |
| N01 |
C10 |
C09 |
C08 |
180.0 |
180.0 |
| N01 |
C10 |
C09 |
H15 |
359.9 |
360.0 |
| C05 |
C10 |
C09 |
N01 |
180.3 |
179.8 |
| C08 |
C09 |
C10 |
H15 |
180.0 |
180.1 |
| C08 |
C09 |
C10 |
N01 |
180.0 |
180.0 |
| C10 |
C09 |
C08 |
H15 |
180.0 |
179.9 |
| C09 |
C08 |
C11 |
H1 |
257.8 |
329.9 |
| C09 |
C08 |
C11 |
H2 |
16.4 |
210.0 |
| C10 |
C09 |
C08 |
C11 |
178.7 |
180.0 |
| N12 |
C11 |
C08 |
H1 |
239.3 |
120.0 |
| N12 |
C11 |
C08 |
H2 |
120.7 |
240.0 |
| C08 |
C11 |
N12 |
H13 |
306.8 |
304.0 |
| H1 |
C11 |
C08 |
H2 |
241.4 |
120.0 |
| C08 |
C11 |
N12 |
H1 |
120.7 |
240.0 |
| C08 |
C11 |
N12 |
H2 |
239.3 |
120.0 |
| C11 |
N12 |
C13 |
H3 |
279.3 |
60.0 |
| C11 |
N12 |
C13 |
H4 |
38.9 |
300.1 |
| H1 |
C11 |
N12 |
H2 |
118.6 |
240.0 |
| C13 |
N12 |
C11 |
H1 |
66.4 |
300.0 |
| C13 |
N12 |
C11 |
H2 |
307.8 |
60.0 |
| C11 |
N12 |
C13 |
H13 |
119.6 |
124.0 |
| C14 |
C13 |
N12 |
H3 |
239.8 |
120.0 |
| C14 |
C13 |
N12 |
H4 |
120.2 |
239.9 |
| N12 |
C13 |
C14 |
H5 |
275.8 |
300.0 |
| N12 |
C13 |
C14 |
H6 |
35.8 |
60.0 |
| H3 |
C13 |
N12 |
H4 |
240.4 |
119.9 |
| C11 |
N12 |
C13 |
C14 |
159.1 |
180.0 |
| N12 |
C13 |
C14 |
H3 |
120.2 |
240.0 |
| N12 |
C13 |
C14 |
H4 |
239.8 |
120.0 |
| C13 |
C14 |
C21 |
C22 |
246.2 |
90.0 |
| C13 |
C14 |
C21 |
C26 |
66.7 |
270.3 |
| C21 |
C14 |
C13 |
H5 |
240.0 |
240.0 |
| C21 |
C14 |
C13 |
H6 |
120.0 |
120.0 |
| H3 |
C13 |
C14 |
H4 |
119.6 |
240.0 |
| H5 |
C14 |
C13 |
H6 |
240.0 |
240.0 |
| C21 |
C14 |
C13 |
H3 |
35.6 |
300.0 |
| C21 |
C14 |
C13 |
H4 |
276.0 |
60.0 |
| C13 |
C14 |
C21 |
H5 |
120.0 |
120.0 |
| C13 |
C14 |
C21 |
H6 |
240.0 |
240.0 |
| C22 |
C21 |
C14 |
C26 |
179.5 |
179.8 |
| C14 |
C21 |
C22 |
H11 |
0.2 |
0.3 |
| C14 |
C21 |
C26 |
H12 |
360.0 |
0.0 |
| H5 |
C14 |
C21 |
H6 |
120.0 |
120.0 |
| C14 |
C21 |
C22 |
C26 |
180.5 |
180.2 |
| C22 |
C21 |
C14 |
H5 |
126.2 |
330.0 |
| C22 |
C21 |
C14 |
H6 |
6.3 |
210.0 |
| C22 |
C21 |
C26 |
H12 |
180.5 |
180.3 |
| C14 |
C21 |
C22 |
C23 |
180.2 |
180.0 |
| C14 |
C21 |
C26 |
C22 |
179.5 |
179.8 |
| C26 |
C21 |
C14 |
H5 |
306.7 |
150.3 |
| C26 |
C21 |
C14 |
H6 |
186.8 |
30.3 |
| C26 |
C21 |
C22 |
H11 |
179.7 |
180.0 |
| C21 |
C26 |
C25 |
H7 |
179.5 |
179.5 |
| C23 |
C24 |
C25 |
H7 |
180.5 |
180.3 |
| C14 |
C21 |
C26 |
C25 |
180.0 |
180.2 |
| C24 |
C25 |
C26 |
H7 |
180.0 |
180.0 |
| C26 |
C25 |
C24 |
H7 |
180.0 |
180.0 |
| C08 |
C11 |
H1 |
H2 |
117.9 |
240.0 |
| H1 |
C11 |
N12 |
C13 |
66.4 |
300.0 |
| N12 |
C11 |
H1 |
H2 |
242.1 |
120.0 |
| H1 |
C11 |
N12 |
H13 |
186.1 |
64.0 |
| C08 |
C11 |
H2 |
H1 |
242.2 |
120.0 |
| H2 |
C11 |
N12 |
C13 |
307.8 |
60.0 |
| N12 |
C11 |
H2 |
H1 |
117.9 |
240.0 |
| H2 |
C11 |
N12 |
H13 |
67.5 |
184.0 |
| N12 |
C13 |
H3 |
H4 |
119.4 |
240.0 |
| H3 |
C13 |
C14 |
C21 |
35.6 |
300.0 |
| C14 |
C13 |
H3 |
H4 |
240.6 |
120.1 |
| H3 |
C13 |
C14 |
H5 |
155.6 |
59.9 |
| H3 |
C13 |
C14 |
H6 |
275.6 |
180.0 |
| N12 |
C13 |
H4 |
H3 |
240.6 |
119.9 |
| H4 |
C13 |
C14 |
C21 |
276.0 |
60.0 |
| C14 |
C13 |
H4 |
H3 |
119.4 |
240.0 |
| H4 |
C13 |
C14 |
H5 |
36.1 |
179.9 |
| H4 |
C13 |
C14 |
H6 |
156.0 |
300.0 |
| C13 |
C14 |
H5 |
C21 |
239.9 |
240.0 |
| H5 |
C14 |
C13 |
H3 |
155.6 |
59.9 |
| H5 |
C14 |
C13 |
H4 |
36.1 |
179.9 |
| C13 |
C14 |
H5 |
H6 |
120.0 |
120.1 |
| H5 |
C14 |
C21 |
C22 |
126.2 |
330.0 |
| H5 |
C14 |
C21 |
C26 |
306.7 |
150.3 |
| C21 |
C14 |
H5 |
H6 |
240.0 |
240.0 |
| C13 |
C14 |
H6 |
C21 |
120.1 |
120.0 |
| H6 |
C14 |
C13 |
H3 |
275.6 |
180.0 |
| H6 |
C14 |
C13 |
H4 |
156.0 |
300.0 |
| C13 |
C14 |
H6 |
H5 |
240.0 |
240.0 |
| H6 |
C14 |
C21 |
C22 |
6.3 |
210.0 |
| H6 |
C14 |
C21 |
C26 |
186.8 |
30.3 |
| C21 |
C14 |
H6 |
H5 |
119.9 |
120.0 |
| H9 |
C27 |
H8 |
H10 |
120.0 |
120.0 |
| H8 |
C27 |
H9 |
H10 |
240.0 |
240.0 |
| H8 |
C27 |
H10 |
H9 |
120.0 |
120.0 |
| H11 |
C22 |
C21 |
C26 |
179.7 |
180.0 |
| H12 |
C26 |
C25 |
H7 |
359.5 |
359.7 |
| C11 |
N12 |
H13 |
C13 |
242.0 |
236.0 |
| H13 |
N12 |
C11 |
H1 |
186.1 |
64.0 |
| H13 |
N12 |
C11 |
H2 |
67.5 |
184.0 |
| H13 |
N12 |
C13 |
H3 |
159.6 |
296.1 |
| H13 |
N12 |
C13 |
H4 |
279.3 |
176.1 |
| H15 |
C09 |
C10 |
N01 |
359.9 |
360.0 |
| C10 |
C09 |
H15 |
C08 |
180.0 |
180.1 |
| H17 |
C06 |
C07 |
H16 |
359.2 |
359.9 |
| H18 |
C04 |
C03 |
C02 |
178.5 |
180.0 |
| H18 |
C04 |
C03 |
H19 |
358.5 |
359.9 |
| C04 |
C03 |
H19 |
C02 |
180.0 |
180.1 |
| H19 |
C03 |
C04 |
H18 |
358.5 |
359.9 |
| H19 |
C03 |
C02 |
N02 |
1.3 |
0.1 |
| H19 |
C03 |
C02 |
N01 |
181.6 |
180.1 |
| H20 |
N02 |
C02 |
N01 |
360.0 |
180.0 |
| C02 |
N02 |
H20 |
H21 |
120.0 |
180.1 |
| H21 |
N02 |
C02 |
N01 |
120.0 |
0.1 |
| C02 |
N02 |
H21 |
H20 |
240.0 |
179.9 |