PDB Chemical Component 9NT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9NT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N4 C7 1.498 1.469
N4 C3 1.494 1.469
C7 C8 1.524 1.507
C8 O9 1.231 1.213
C8 N10 1.343 1.347
N10 C11 1.415 1.401
C11 C16 1.393 1.388
C11 C12 1.389 1.389
C16 C15 1.384 1.382
C12 C13 1.374 1.384
C15 C14 1.377 1.385
C13 C14 1.377 1.393
C13 O17 1.381 1.365
C14 O19 1.362 1.366
O17 C18 1.403 1.440
O19 C18 1.442 1.440
C3 H3 1.100 1.089
C3 H1 1.100 1.090
C7 H7A 1.100 1.089
C7 H7 1.100 1.090
N10 HN10 1.000 0.970
C12 H12 1.080 1.080
C15 H4 1.080 1.080
C16 H16 1.080 1.079
C18 H18A 1.100 1.089
C18 H18 1.100 1.090
C3 C1   1.531
C1 C2   1.531
C2 C4   1.531
C4 C6   1.529
N4 C6   1.468
C1 H2   1.090
C1 H5   1.090
C2 H6   1.090
C2 H8   1.090
C4 H9   1.090
C4 H10   1.089
C6 H11   1.090
C6 H13   1.090
N4 HN4 1.000 1.009

Bond Angles for 9NT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N4 C7 C8 108.6 109.5
N4 C7 H7A 109.7 109.5
N4 C7 H7 109.7 109.4
C7 N4 C6   109.4
C7 N4 HN4 123.6 109.4
N4 C3 H3 102.3 109.4
N4 C3 H1 102.4 109.4
N4 C3 C1   109.6
C7 C8 O9 121.2 120.0
C7 C8 N10 114.3 120.0
C8 C7 H7A 109.7 109.5
C8 C7 H7 109.7 109.5
O9 C8 N10 124.5 120.0
C8 N10 C11 127.4 120.0
C8 N10 HN10 116.3 120.0
N10 C11 C16 117.6 120.0
N10 C11 C12 122.0 120.0
C11 N10 HN10 116.3 120.0
C12 C11 C16 120.4 120.0
C11 C16 C15 120.8 120.1
C11 C16 H16 119.6 119.9
C11 C12 C13 118.2 119.9
C11 C12 H12 120.9 120.0
C16 C15 H4 121.0 119.9
C12 C13 C14 121.1 119.9
C12 C13 O17 128.5 131.4
C13 C12 H12 120.9 120.1
C15 C14 O19 128.5 131.4
C14 C13 O17 110.4 108.6
C13 C14 O19 109.8 108.6
C13 O17 C18 105.2 105.5
C14 O19 C18 105.3 105.5
O17 C18 H18A 109.6 110.6
O17 C18 H18 109.5 110.5
O19 C18 H18A 109.5 110.6
O19 C18 H18 109.5 110.7
H3 C3 H1 109.5 109.5
H3 C3 C1   109.5
H1 C3 C1   109.4
H7A C7 H7 109.5 109.5
H18A C18 H18 109.5 110.5
C3 C1 C2   109.3
C3 C1 H2   109.5
C3 C1 H5   109.5
C1 C2 C4   109.1
C2 C1 H2   109.5
C2 C1 H5   109.6
C1 C2 H6   109.5
C1 C2 H8   109.5
C2 C4 C6   109.3
C4 C2 H6   109.5
C4 C2 H8   109.5
C2 C4 H9   109.5
C2 C4 H10   109.5
N4 C6 C4   109.7
C6 C4 H9   109.5
C6 C4 H10   109.5
C4 C6 H11   109.5
C4 C6 H13   109.4
N4 C6 H11   109.4
N4 C6 H13   109.4
C6 N4 HN4   109.4
H2 C1 H5   109.5
H6 C2 H8   109.6
H9 C4 H10   109.6
H11 C6 H13   109.4

Torsion Angles for 9NT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C7 N4 C3 H3 247.3 303.3
C7 N4 C3 H1 0.7 63.3
C7 N4 C3 C1   183.2
N4 C7 C8 O9 344.4 360.0
N4 C7 C8 N10 164.3 180.0
C8 C7 N4 H7A 240.1 240.0
C8 C7 N4 H7 119.8 120.0
H7A C7 N4 H7 239.7 240.0
C7 N4 C6 C4   176.7
C7 N4 C6 H11   296.8
C7 N4 C6 H13   56.7
C6 N4 C7 HN4   240.2
H3 C3 N4 H1 246.6 240.0
H3 C3 N4 C1   120.1
H1 C3 N4 C1   240.1
N4 C3 C1 C2   300.1
N4 C3 C1 H2   60.0
N4 C3 C1 H5   180.1
N4 C7 C8 H7A 119.8 120.0
N4 C7 C8 H7 240.1 240.0
C8 C7 N4 C6   295.3
C8 C7 N4 HN4 93.1 55.2
O9 C8 C7 N10 180.1 179.9
C7 C8 N10 C11 178.2 174.7
C7 C8 N10 HN10 358.2 354.7
H7A C7 C8 H7 120.3 120.0
C7 C8 O9 N10 179.9 180.1
O9 C8 C7 H7A 224.5 240.0
O9 C8 C7 H7 104.3 119.9
O9 C8 N10 C11 358.1 354.8
O9 C8 N10 HN10 178.1 174.7
C7 C8 N10 O9 180.1 179.9
N10 C8 C7 H7A 44.4 60.0
N10 C8 C7 H7 284.2 300.0
C8 N10 C11 C16 169.9 326.6
C8 N10 C11 C12 350.1 146.9
C11 N10 C8 HN10 180.0 180.1
C8 N10 C11 HN10 180.0 179.9
C12 C11 N10 C16 180.2 180.3
N10 C11 C16 C15 179.9 179.8
N10 C11 C16 H16 359.9 0.1
N10 C11 C12 C13 177.3 180.0
N10 C11 C12 H12 357.3 359.9
N10 C11 C16 C12 180.2 180.3
C16 C11 N10 HN10 349.8 146.6
C16 C11 C12 C13 357.5 0.3
C16 C11 C12 H12 177.5 180.3
C11 C16 C15 H4 181.9 180.3
N10 C11 C12 C16 179.8 179.7
C12 C11 N10 HN10 170.1 327.0
C12 C11 C16 C15 359.7 359.4
C12 C11 C16 H16 179.7 179.7
C11 C12 C13 C14 3.6 359.9
C11 C12 C13 O17 186.2 180.0
C13 C12 C11 H12 180.0 180.0
C11 C16 C15 H16 180.0 180.3
C16 C15 C14 O19 174.6 179.8
C13 C12 C11 C16 357.5 0.3
C11 C12 C13 H12 180.0 180.0
C14 C13 C12 O17 177.4 179.9
C12 C13 C14 O19 181.8 180.0
C12 C13 O17 C18 176.6 162.7
C11 C16 C15 C14 1.9 0.5
C15 C14 C13 O17 175.8 180.0
C13 C14 C15 O19 184.7 180.0
C15 C14 O19 C18 185.7 197.3
C12 C13 C14 O17 182.1 180.1
C14 C13 C12 H12 183.6 180.0
C15 C14 C13 O19 176.1 180.0
C14 C13 O17 C18 358.9 342.7
C13 C14 O19 C18 1.5 17.3
C12 C13 O17 C14 177.6 179.9
O17 C13 C12 H12 6.2 0.0
O17 C13 C14 O19 359.7 359.9
C13 O17 C18 H18A 121.9 145.7
C13 O17 C18 H18 242.0 268.4
O19 C14 C13 O17 359.7 359.9
C14 O19 C18 H18A 237.8 214.3
C14 O19 C18 H18 117.8 91.4
C14 O19 C18 O17 357.8 332.9
O19 C18 O17 H18A 240.0 241.4
O19 C18 O17 H18 120.0 118.7
H18A C18 O17 H18 239.9 237.3
O17 C18 O19 H18A 120.0 118.6
O17 C18 O19 H18 240.0 241.4
H18A C18 O19 H18 120.0 122.8
N4 C3 H3 H1 108.1 119.9
N4 C3 H3 C1   239.9
H1 C3 H3 C1   119.9
H3 C3 C1 C2   180.0
H3 C3 C1 H2   300.0
H3 C3 C1 H5   60.0
N4 C3 H1 H3 252.0 240.1
N4 C3 H1 C1   120.1
H3 C3 H1 C1   240.0
H1 C3 C1 C2   60.0
H1 C3 C1 H2   180.0
H1 C3 C1 H5   300.0
N4 C7 H7A C8 240.8 240.0
N4 C7 H7A H7 120.4 120.0
H7A C7 N4 C6   55.3
H7A C7 N4 HN4 212.9 175.2
H7A C7 C8 O9 224.5 240.0
H7A C7 C8 N10 44.4 60.0
C8 C7 H7A H7 239.6 240.0
N4 C7 H7 C8 119.2 120.0
N4 C7 H7 H7A 239.6 240.0
H7 C7 N4 C6   175.4
H7 C7 N4 HN4 333.2 295.2
H7 C7 C8 O9 104.3 119.9
H7 C7 C8 N10 284.2 300.0
C8 C7 H7 H7A 120.4 120.0
C8 N10 HN10 C11 180.0 180.1
HN10 N10 C11 C16 349.8 146.6
HN10 N10 C11 C12 170.1 327.0
H12 C12 C11 C16 177.5 180.3
C11 C12 H12 C13 180.0 180.0
H12 C12 C13 C14 183.6 180.0
H12 C12 C13 O17 6.2 0.0
H4 C15 C14 O19 354.6 0.0
C11 C16 H16 C15 180.0 179.7
H16 C16 C15 H4 1.9 360.0
O17 C18 H18A H18 120.1 122.7
O19 C18 H18A H18 239.9 237.0
O17 C18 H18 H18A 239.9 237.2
O19 C18 H18 H18A 120.1 122.9
N4 C3 C1 H3   120.0
N4 C3 C1 H1   240.0
H3 C3 C1 H1   120.0
C3 C1 C2 C4   56.9
C2 C1 C3 H2   240.0
C2 C1 C3 H5   120.0
C3 C1 C2 H6   176.8
C3 C1 C2 H8   297.0
H2 C1 C3 H5   239.9
C3 C1 C2 H2   119.9
C3 C1 C2 H5   240.1
C1 C2 C4 C6   303.1
C4 C2 C1 H6   240.1
C4 C2 C1 H8   119.9
C1 C2 C4 H9   63.0
C1 C2 C4 H10   183.1
H2 C1 C2 H5   120.1
H6 C2 C1 H8   239.8
C4 C2 C1 H2   297.0
C4 C2 C1 H5   176.8
C1 C2 C4 H6   119.9
C1 C2 C4 H8   240.1
N4 C6 C4 C2   59.9
C6 C4 C2 H9   240.1
C6 C4 C2 H10   120.0
C2 C4 C6 H11   299.9
C2 C4 C6 H13   180.0
H6 C2 C4 H8   120.2
H9 C4 C2 H10   239.9
C6 C4 C2 H6   183.2
C6 C4 C2 H8   63.0
C2 C4 C6 H9   119.9
C2 C4 C6 H10   240.0
N4 C6 C4 H11   120.1
N4 C6 C4 H13   240.0
C4 C6 N4 HN4   56.9
H9 C4 C6 H10   120.1
H11 C6 C4 H13   119.9
C6 N4 C7 C8   295.3
C6 N4 C7 H7A   55.3
C6 N4 C7 H7   175.4
C7 N4 C6 HN4   119.9
C6 N4 C3 H3   183.2
C6 N4 C3 H1   303.2
C6 N4 C3 C1   63.1
C2 C4 C6 N4   59.9
N4 C6 C4 H9   300.1
N4 C6 C4 H10   179.9
C4 C6 N4 H11   239.9
C4 C6 N4 H13   120.0
H11 C6 N4 H13   240.1
C3 C1 H2 C2   240.2
C3 C1 H2 H5   120.0
H2 C1 C2 C4   297.0
C2 C1 H2 H5   239.8
H2 C1 C2 H6   56.9
H2 C1 C2 H8   177.1
C3 C1 H5 C2   119.8
C3 C1 H5 H2   240.0
H5 C1 C2 C4   176.8
C2 C1 H5 H2   120.2
H5 C1 C2 H6   296.8
H5 C1 C2 H8   57.0
C1 C2 H6 C4   240.3
H6 C2 C1 H2   56.9
H6 C2 C1 H5   296.8
C1 C2 H6 H8   120.2
H6 C2 C4 C6   183.2
C4 C2 H6 H8   239.8
H6 C2 C4 H9   303.1
H6 C2 C4 H10   63.2
C1 C2 H8 C4   119.6
H8 C2 C1 H2   177.1
H8 C2 C1 H5   57.0
C1 C2 H8 H6   239.8
H8 C2 C4 C6   63.0
C4 C2 H8 H6   120.2
H8 C2 C4 H9   182.9
H8 C2 C4 H10   303.0
C2 C4 H9 C6   240.2
H9 C4 C2 H6   303.1
H9 C4 C2 H8   182.9
C2 C4 H9 H10   120.1
C6 C4 H9 H10   239.9
H9 C4 C6 H11   180.0
H9 C4 C6 H13   60.1
C2 C4 H10 C6   119.8
H10 C4 C2 H6   63.2
H10 C4 C2 H8   303.0
C2 C4 H10 H9   239.9
C6 C4 H10 H9   120.1
H10 C4 C6 H11   59.9
H10 C4 C6 H13   299.9
N4 C6 H11 C4   239.8
H11 C6 C4 H9   180.0
H11 C6 C4 H10   59.9
C4 C6 H11 H13   240.1
N4 C6 H11 H13   119.9
H11 C6 N4 HN4   177.0
N4 C6 H13 C4   120.2
H13 C6 C4 H9   60.1
H13 C6 C4 H10   299.9
C4 C6 H13 H11   120.0
N4 C6 H13 H11   240.1
H13 C6 N4 HN4   296.9
HN4 N4 C7 C8 93.1 55.2
HN4 N4 C7 H7A 212.9 175.2
HN4 N4 C7 H7 333.2 295.2
C7 N4 HN4 C6   240.1
HN4 N4 C3 H3 78.0 63.2
HN4 N4 C3 H1 191.5 183.1
HN4 N4 C3 C1   303.1
HN4 N4 C6 C4   56.9
HN4 N4 C6 H11   177.0
HN4 N4 C6 H13   296.9