Atom Nomenclature for 9MW

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 9MW

Atom Name (V3) Atom Name (V2)
CAB CAB
CAO CAO
CBD CBD
CBS CBS
CAT CAT
CAV CAV
CAU CAU
CAW CAW
CBU CBU
CBH CBH
CBR CBR
OAL OAL
N N
CA CA
CB CB
CG1 CG1
CG2 CG2
C C
O O
NBJ NBJ
CBB CBB
CAN CAN
CAA CAA
OAM OAM
CBF CBF
CBC CBC
CBE CBE
NCA NCA
NBM NBM
CBQ CBQ
CCC CCC
OAK OAK
CBZ CBZ
CCB CCB
CAG CAG
CAH CAH
CAF CAF
NBK NBK
CBO CBO
OAI OAI
OBN OBN
CAC CAC
CBG CBG
CBT CBT
CAX CAX
CAZ CAZ
CAY CAY
CBA CBA
CBW CBW
CBV CBV
CAR CAR
CAP CAP
NBI NBI
CAQ CAQ
CAS CAS
HAR HAR
HAP HAP
HAQ HAQ
HAS HAS
HBA HBA
HAZ HAZ
HAY HAY
HAX HAX
HBG1 HBG1
HBG2 HBG2
HBM HBM
HBE1 HBE1
HBE2 HBE2
HBZ HBZ
HBK HBK
HAG1 HAG1
HAG2 HAG2
HAG3 HAG3
HAH1 HAH1
HAH2 HAH2
HAH3 HAH3
HAF1 HAF1
HAF2 HAF2
HAF3 HAF3
HAC1 HAC1
HAC2 HAC2
HAC3 HAC3
HBC1 HBC1
HBC2 HBC2
HBF1 HBF1
HBF2 HBF2
HBH1 HBH1
HBH2 HBH2
HAM HAM
HAW HAW
HAV HAV
HAU HAU
HAT HAT
HBD1 HBD1
HBD2 HBD2
HAO1 HAO1
HAB1 HAB1
HAB2 HAB2
H H
HA HA
HB HB
HG11 HG11
HG12 HG12
HG13 HG13
HG21 HG21
HG22 HG22
HG23 HG23
HBJ HBJ
HBB1 HBB1
HBB2 HBB2
HAN1 HAN1
HAA1 HAA1
HAA2 HAA2