PDB Chemical Component 9MK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9MK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
C1 |
1.508 |
1.507 |
| C1 |
C16 |
1.378 |
1.362 |
| C1 |
C2 |
1.395 |
1.394 |
| C16 |
C15 |
1.414 |
1.403 |
| C2 |
C3 |
1.362 |
1.359 |
| C15 |
C14 |
1.409 |
1.408 |
| C15 |
C4 |
1.410 |
1.420 |
| C14 |
C13 |
1.360 |
1.365 |
| C3 |
C4 |
1.414 |
1.409 |
| O |
C6 |
1.228 |
1.216 |
| C4 |
N |
1.371 |
1.333 |
| C13 |
C5 |
1.392 |
1.404 |
| N |
C5 |
1.327 |
1.319 |
| C5 |
C6 |
1.502 |
1.482 |
| C6 |
C7 |
1.489 |
1.475 |
| C7 |
C12 |
1.392 |
1.397 |
| C7 |
C8 |
1.387 |
1.398 |
| C12 |
C11 |
1.388 |
1.383 |
| C8 |
C9 |
1.381 |
1.378 |
| C11 |
O1 |
1.358 |
1.360 |
| C11 |
C10 |
1.392 |
1.391 |
| C9 |
C10 |
1.370 |
1.385 |
| C10 |
F |
1.348 |
1.351 |
| C2 |
H1 |
1.080 |
1.081 |
| C9 |
H2 |
1.080 |
1.080 |
| C8 |
H3 |
1.080 |
1.080 |
| C3 |
H4 |
1.080 |
1.079 |
| C16 |
H5 |
1.081 |
1.080 |
| C14 |
H6 |
1.080 |
1.080 |
| C13 |
H7 |
1.080 |
1.079 |
| C12 |
H8 |
1.080 |
1.079 |
| O1 |
H9 |
0.950 |
0.967 |
| C |
H10 |
1.100 |
1.090 |
| C |
H11 |
1.100 |
1.090 |
| C |
H12 |
1.100 |
1.090 |
Bond Angles for 9MK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C16 |
118.4 |
120.9 |
| C1 |
C16 |
C15 |
121.8 |
119.6 |
| C1 |
C16 |
H5 |
119.1 |
120.1 |
| C1 |
C2 |
C3 |
121.6 |
121.1 |
| C1 |
C2 |
H1 |
119.2 |
119.4 |
| C16 |
C15 |
C14 |
123.7 |
121.3 |
| C15 |
C16 |
H5 |
119.1 |
120.2 |
| C2 |
C3 |
C4 |
120.7 |
119.7 |
| C3 |
C2 |
H1 |
119.2 |
119.4 |
| C2 |
C3 |
H4 |
119.6 |
120.2 |
| C15 |
C14 |
C13 |
120.0 |
118.3 |
| C15 |
C14 |
H6 |
120.0 |
120.9 |
| C15 |
C4 |
N |
121.9 |
120.0 |
| C13 |
C14 |
H6 |
120.0 |
120.8 |
| C14 |
C13 |
H7 |
120.7 |
120.1 |
| C3 |
C4 |
N |
119.4 |
121.0 |
| C4 |
N |
C5 |
117.6 |
121.3 |
| C6 |
C7 |
C12 |
118.7 |
120.1 |
| C7 |
C12 |
C11 |
120.4 |
119.8 |
| C7 |
C12 |
H8 |
119.8 |
120.1 |
| C7 |
C8 |
H3 |
119.7 |
120.0 |
| C12 |
C11 |
O1 |
122.0 |
119.9 |
| C11 |
C12 |
H8 |
119.8 |
120.1 |
| C8 |
C9 |
C10 |
118.7 |
120.2 |
| C8 |
C9 |
H2 |
120.6 |
119.9 |
| C11 |
O1 |
H9 |
109.5 |
114.0 |
| C11 |
C10 |
F |
118.6 |
119.9 |
| C9 |
C10 |
F |
118.9 |
119.9 |
| C10 |
C9 |
H2 |
120.7 |
119.9 |
| H10 |
C |
H11 |
109.5 |
109.4 |
| H10 |
C |
H12 |
109.5 |
109.5 |
| H11 |
C |
H12 |
109.5 |
109.5 |
Torsion Angles for 9MK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
C1 |
C16 |
H5 |
1.2 |
0.3 |
| C |
C1 |
C2 |
H1 |
359.6 |
359.6 |
| C16 |
C1 |
C2 |
C3 |
0.2 |
0.1 |
| C16 |
C1 |
C2 |
H1 |
180.2 |
180.0 |
| C1 |
C16 |
C15 |
C14 |
178.3 |
180.0 |
| C15 |
C16 |
C1 |
H5 |
180.0 |
180.0 |
| C2 |
C1 |
C16 |
C15 |
0.6 |
359.9 |
| C2 |
C1 |
C16 |
H5 |
180.6 |
179.9 |
| C1 |
C2 |
C3 |
C4 |
359.6 |
359.9 |
| C3 |
C2 |
C1 |
H1 |
180.0 |
180.1 |
| C1 |
C2 |
C3 |
H4 |
179.6 |
179.9 |
| C1 |
C16 |
C15 |
H5 |
180.0 |
180.0 |
| C16 |
C15 |
C14 |
C13 |
179.8 |
180.0 |
| C16 |
C15 |
C14 |
H6 |
359.7 |
0.1 |
| C16 |
C15 |
C4 |
N |
180.9 |
179.9 |
| C3 |
C2 |
C1 |
C16 |
0.2 |
0.1 |
| C1 |
C2 |
C3 |
H1 |
180.0 |
179.9 |
| C2 |
C3 |
C4 |
N |
179.8 |
180.0 |
| C14 |
C15 |
C16 |
H5 |
358.3 |
359.9 |
| C14 |
C15 |
C4 |
N |
1.4 |
0.0 |
| C13 |
C14 |
C15 |
H6 |
180.0 |
180.0 |
| C15 |
C14 |
C13 |
H7 |
179.9 |
180.0 |
| C1 |
C16 |
C15 |
C4 |
358.8 |
0.1 |
| C3 |
C4 |
C15 |
N |
180.1 |
180.0 |
| C15 |
C4 |
N |
C5 |
358.8 |
360.0 |
| C15 |
C14 |
C13 |
H6 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H1 |
179.6 |
180.1 |
| C2 |
C3 |
C4 |
H4 |
180.0 |
180.0 |
| C15 |
C4 |
C3 |
N |
179.9 |
180.0 |
| C3 |
C4 |
N |
C5 |
178.8 |
180.0 |
| C4 |
N |
C5 |
C13 |
0.3 |
0.0 |
| C4 |
N |
C5 |
C6 |
181.0 |
180.0 |
| C5 |
C6 |
C7 |
C12 |
160.9 |
354.5 |
| C6 |
C7 |
C12 |
C11 |
180.0 |
180.2 |
| C6 |
C7 |
C12 |
H8 |
360.0 |
359.9 |
| C6 |
C7 |
C8 |
H3 |
359.7 |
0.1 |
| C12 |
C7 |
C8 |
H3 |
179.9 |
180.0 |
| C7 |
C12 |
C11 |
O1 |
177.8 |
179.9 |
| C11 |
C12 |
C7 |
H8 |
180.0 |
180.3 |
| C7 |
C8 |
C9 |
C10 |
0.2 |
0.0 |
| C7 |
C8 |
C9 |
H2 |
180.2 |
179.7 |
| C7 |
C12 |
C11 |
H8 |
180.0 |
179.7 |
| C12 |
C11 |
O1 |
H9 |
180.0 |
90.0 |
| C12 |
C11 |
C10 |
F |
180.2 |
180.6 |
| C8 |
C9 |
C10 |
F |
179.6 |
179.7 |
| C10 |
C9 |
C8 |
H2 |
180.0 |
180.3 |
| O1 |
C11 |
C12 |
H8 |
357.9 |
0.3 |
| O1 |
C11 |
C10 |
F |
2.5 |
0.1 |
| C7 |
C12 |
C11 |
C10 |
0.2 |
359.5 |
| C9 |
C10 |
C11 |
F |
179.8 |
179.9 |
| C11 |
C10 |
C9 |
H2 |
179.8 |
180.1 |
| C8 |
C9 |
C10 |
H2 |
180.0 |
179.7 |
| C11 |
C10 |
C9 |
F |
180.2 |
180.1 |
| F |
C10 |
C9 |
H2 |
359.6 |
360.0 |
| H1 |
C2 |
C1 |
C16 |
180.2 |
180.0 |
| C1 |
C2 |
H1 |
C3 |
180.0 |
180.1 |
| H1 |
C2 |
C3 |
C4 |
179.6 |
180.1 |
| H1 |
C2 |
C3 |
H4 |
359.7 |
0.0 |
| C8 |
C9 |
H2 |
C10 |
180.0 |
180.3 |
| H2 |
C9 |
C10 |
F |
359.6 |
360.0 |
| H3 |
C8 |
C9 |
C10 |
180.3 |
180.0 |
| H3 |
C8 |
C9 |
H2 |
0.2 |
359.7 |
| C2 |
C3 |
H4 |
C4 |
180.0 |
180.0 |
| H4 |
C3 |
C2 |
H1 |
359.7 |
0.0 |
| H4 |
C3 |
C4 |
N |
359.8 |
0.1 |
| C1 |
C16 |
H5 |
C15 |
180.0 |
180.0 |
| H5 |
C16 |
C15 |
C14 |
358.3 |
359.9 |
| C15 |
C14 |
H6 |
C13 |
180.0 |
180.0 |
| H6 |
C14 |
C13 |
H7 |
359.9 |
0.0 |
| H7 |
C13 |
C14 |
H6 |
359.9 |
0.0 |
| C7 |
C12 |
H8 |
C11 |
180.0 |
180.3 |
| H8 |
C12 |
C11 |
O1 |
357.9 |
0.3 |
| H11 |
C |
H10 |
H12 |
120.0 |
120.0 |
| H10 |
C |
H11 |
H12 |
240.0 |
240.0 |
| H10 |
C |
H12 |
H11 |
120.0 |
119.9 |