PDB Chemical Component 9MJ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9MJ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	N	1.332	1.348
C	O	1.252	1.215
C	N1	1.392	1.348
C1	N2	1.327	1.314
C1	C3	1.449	1.477
C1	N3	1.383	1.344
N1	C2	1.384	1.364
N1	N2	1.378	1.404
O1	C3	1.366	1.348
O1	C4	1.377	1.342
C2	N3	1.340	1.313
C2	N4	1.330	1.380
C3	C6	1.350	1.360
C4	C5	1.324	1.348
C5	C6	1.431	1.408
N	HN	1.000	0.970
N	HNA	1.000	0.970
C4	H4	1.081	1.080
N4	HN4	1.000	0.970
N4	HN4A	1.000	0.970
C5	H5	1.080	1.080
C6	H6	1.080	1.079

Bond Angles for 9MJ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N	C	O	124.8	120.0
N	C	N1	115.2	120.0
C	N	HN	120.0	120.0
C	N	HNA	120.0	119.9
O	C	N1	119.9	120.0
C	N1	C2	127.5	126.9
C	N1	N2	123.2	126.8
N2	C1	C3	121.3	125.5
N2	C1	N3	116.0	109.1
C1	N2	N1	102.5	107.0
C3	C1	N3	122.7	125.4
C1	C3	O1	117.6	125.9
C1	C3	C6	132.4	126.0
C1	N3	C2	102.2	109.7
C2	N1	N2	109.2	106.3
N1	C2	N3	110.0	108.0
N1	C2	N4	124.0	126.0
C3	O1	C4	106.3	109.4
O1	C3	C6	110.0	108.1
O1	C4	C5	110.6	108.7
O1	C4	H4	124.7	125.7
N3	C2	N4	125.9	126.0
C2	N4	HN4	109.5	120.0
C2	N4	HN4A	109.5	120.0
C3	C6	C5	106.3	106.7
C3	C6	H6	126.8	126.6
C4	C5	C6	106.8	107.0
C5	C4	H4	124.7	125.6
C4	C5	H5	126.6	126.5
C6	C5	H5	126.6	126.5
C5	C6	H6	126.8	126.6
HN	N	HNA	120.0	120.1
HN4	N4	HN4A	109.5	120.0

Torsion Angles for 9MJ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O	C	N	N1	177.3	180.2
N	C	N1	C2	181.8	180.0
N	C	N1	N2	359.7	0.4
HN	N	C	HNA	180.0	179.9
N	C	O	N1	182.8	179.8
O	C	N	HN	360.0	360.0
O	C	N	HNA	180.0	180.0
O	C	N1	C2	4.3	359.8
O	C	N1	N2	182.2	180.2
N	C	N1	O	177.4	180.2
N1	C	N	HN	182.7	179.8
N1	C	N	HNA	2.7	359.8
C1	N2	N1	C	181.2	180.0
C2	N1	C	N2	182.1	179.6
C	N1	C2	N3	179.9	180.0
C	N1	C2	N4	359.3	359.9
C	N1	N2	C1	181.2	180.0
C3	C1	N2	N3	181.8	180.2
N2	C1	C3	O1	179.8	0.1
N2	C1	C3	C6	1.3	180.0
N2	C1	N3	C2	1.9	360.0
C2	N1	N2	C1	359.4	0.3
N2	C1	C3	N3	178.1	179.8
C3	C1	N2	N1	181.0	180.0
C3	C1	N3	C2	180.0	179.8
C1	C3	O1	C4	180.7	179.9
O1	C3	C1	C6	178.5	180.1
C1	C3	C6	C5	180.1	180.1
C1	C3	C6	H6	0.1	0.1
N2	C1	N3	C3	181.8	180.2
N3	C1	N2	N1	359.2	359.8
N3	C1	C3	O1	1.7	180.3
N3	C1	C3	C6	183.2	0.2
N1	C2	N3	C1	357.9	0.3
C1	N3	C2	N4	178.5	180.3
C	N1	C2	N2	178.1	180.3
C1	N2	N1	C2	359.4	0.3
C1	N3	C2	N1	357.9	0.3
N3	C2	N1	N4	180.6	180.1
N1	C2	N4	HN4	180.7	0.1
N1	C2	N4	HN4A	300.7	180.0
C	N1	N2	C2	181.8	179.7
N1	N2	C1	C3	181.0	180.0
N1	N2	C1	N3	359.2	359.8
N2	N1	C2	N3	1.8	359.6
N2	N1	C2	N4	181.2	179.5
O1	C3	C1	N3	1.7	180.3
C1	C3	O1	C6	181.2	179.9
C3	O1	C4	C5	359.0	360.0
C3	O1	C4	H4	179.0	180.0
O1	C3	C6	C5	1.6	360.0
O1	C3	C6	H6	181.6	180.0
C4	O1	C3	C6	359.6	0.0
O1	C4	C5	C6	1.9	360.0
C5	C4	O1	H4	180.0	180.0
O1	C4	C5	H5	181.9	180.0
N3	C2	N1	N2	1.8	359.6
N1	C2	N3	N4	179.4	179.9
N3	C2	N4	HN4	360.0	180.0
N3	C2	N4	HN4A	120.0	359.9
N4	C2	N1	N2	181.2	179.5
N1	C2	N4	N3	180.7	180.1
HN4	N4	C2	HN4A	240.0	180.1
C6	C3	C1	N3	183.2	0.2
C1	C3	C6	O1	178.6	180.1
C6	C3	O1	C4	359.6	0.0
C4	C5	C6	C3	357.9	0.0
C3	C6	C5	H5	177.9	180.0
C5	C6	C3	H6	180.0	179.9
O1	C4	C5	H4	180.0	180.0
C3	C6	C5	C4	357.9	0.0
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	H6	177.8	180.0
C3	C6	C5	H6	180.0	180.1
C6	C5	C4	H4	181.9	180.0
C4	C5	C6	H5	180.0	180.0
HN	N	C	O	360.0	360.0
HN	N	C	N1	182.7	179.8
C	N	HN	HNA	180.0	180.1
HNA	N	C	O	180.0	180.0
HNA	N	C	N1	2.7	359.8
C	N	HNA	HN	180.0	179.9
O1	C4	H4	C5	180.0	180.0
H4	C4	C5	C6	181.9	180.0
H4	C4	C5	H5	1.9	360.0
C2	N4	HN4	HN4A	120.0	179.9
C2	N4	HN4A	HN4	239.9	180.1
C4	C5	H5	C6	180.0	180.0
H5	C5	C4	H4	1.9	360.0
H5	C5	C6	H6	357.9	360.0
C3	C6	H6	C5	180.0	179.9
H6	C6	C5	H5	357.9	360.0