PDB Chemical Component 9LG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9LG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C30 |
C29 |
1.383 |
1.383 |
| C30 |
C24 |
1.387 |
1.382 |
| C29 |
C21 |
1.389 |
1.382 |
| C24 |
C16 |
1.375 |
1.384 |
| C21 |
C6 |
1.392 |
1.382 |
| C16 |
C6 |
1.390 |
1.385 |
| C16 |
F20 |
1.351 |
1.351 |
| C6 |
S1 |
1.776 |
1.762 |
| O12 |
S1 |
1.430 |
1.421 |
| O11 |
S1 |
1.428 |
1.421 |
| S1 |
N5 |
1.641 |
1.656 |
| N5 |
C15 |
1.494 |
1.470 |
| N5 |
C9 |
1.491 |
1.474 |
| C15 |
C17 |
1.515 |
1.533 |
| C9 |
C3 |
1.503 |
1.512 |
| C17 |
C7 |
1.498 |
1.508 |
| C3 |
C7 |
1.396 |
1.359 |
| C3 |
N2 |
1.457 |
1.350 |
| C7 |
C8 |
1.337 |
1.393 |
| C26 |
C32 |
1.388 |
1.382 |
| C26 |
C22 |
1.392 |
1.382 |
| C32 |
C36 |
1.387 |
1.382 |
| C13 |
N2 |
1.461 |
1.465 |
| C13 |
C22 |
1.507 |
1.507 |
| N2 |
C4 |
1.400 |
1.378 |
| C22 |
C25 |
1.394 |
1.383 |
| C8 |
C4 |
1.420 |
1.380 |
| C36 |
C31 |
1.380 |
1.382 |
| C4 |
C10 |
1.471 |
1.466 |
| C25 |
C31 |
1.392 |
1.382 |
| C10 |
O18 |
1.228 |
1.217 |
| C10 |
N14 |
1.344 |
1.347 |
| N14 |
C19 |
1.468 |
1.466 |
| C19 |
C23 |
1.512 |
1.507 |
| C27 |
C23 |
1.392 |
1.382 |
| C27 |
C33 |
1.391 |
1.383 |
| C23 |
C28 |
1.393 |
1.382 |
| C33 |
C35 |
1.383 |
1.382 |
| C28 |
C34 |
1.395 |
1.383 |
| C35 |
C34 |
1.385 |
1.382 |
| C8 |
H1 |
1.079 |
1.081 |
| C13 |
H2 |
1.100 |
1.090 |
| C13 |
H3 |
1.100 |
1.090 |
| C15 |
H4 |
1.100 |
1.090 |
| C15 |
H5 |
1.100 |
1.090 |
| C17 |
H6 |
1.100 |
1.090 |
| C17 |
H7 |
1.100 |
1.090 |
| C21 |
H8 |
1.080 |
1.080 |
| C24 |
H9 |
1.080 |
1.080 |
| C26 |
H10 |
1.081 |
1.080 |
| C28 |
H11 |
1.079 |
1.080 |
| C30 |
H12 |
1.080 |
1.080 |
| C29 |
H13 |
1.080 |
1.080 |
| N14 |
H14 |
1.000 |
0.971 |
| C19 |
H15 |
1.101 |
1.090 |
| C19 |
H16 |
1.100 |
1.090 |
| C27 |
H17 |
1.080 |
1.080 |
| C33 |
H18 |
1.080 |
1.080 |
| C35 |
H19 |
1.080 |
1.081 |
| C34 |
H20 |
1.080 |
1.080 |
| C25 |
H21 |
1.080 |
1.080 |
| C31 |
H22 |
1.080 |
1.081 |
| C36 |
H23 |
1.081 |
1.080 |
| C32 |
H24 |
1.080 |
1.080 |
| C9 |
H25 |
1.100 |
1.090 |
| C9 |
H26 |
1.100 |
1.089 |
Bond Angles for 9LG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C29 |
C30 |
H12 |
119.8 |
120.0 |
| C30 |
C29 |
H13 |
119.7 |
120.0 |
| C30 |
C24 |
H9 |
120.8 |
120.0 |
| C29 |
C21 |
H8 |
120.3 |
119.9 |
| C24 |
C16 |
F20 |
118.4 |
120.1 |
| C16 |
C24 |
H9 |
120.8 |
120.0 |
| C21 |
C6 |
S1 |
117.8 |
120.0 |
| C16 |
C6 |
S1 |
123.4 |
120.0 |
| C6 |
S1 |
N5 |
109.0 |
107.2 |
| O12 |
S1 |
N5 |
106.7 |
106.4 |
| O11 |
S1 |
N5 |
106.8 |
106.5 |
| S1 |
N5 |
C9 |
117.5 |
120.8 |
| N5 |
C15 |
H4 |
109.3 |
109.5 |
| N5 |
C15 |
H5 |
109.3 |
109.6 |
| N5 |
C9 |
C3 |
109.6 |
107.3 |
| N5 |
C9 |
H25 |
109.5 |
109.9 |
| N5 |
C9 |
H26 |
109.4 |
109.9 |
| C17 |
C15 |
H4 |
109.3 |
109.5 |
| C17 |
C15 |
H5 |
109.3 |
109.6 |
| C15 |
C17 |
H6 |
109.5 |
109.6 |
| C15 |
C17 |
H7 |
109.5 |
109.6 |
| C7 |
C8 |
H1 |
124.9 |
126.5 |
| C26 |
C32 |
C36 |
120.3 |
120.0 |
| C32 |
C26 |
H10 |
119.7 |
120.1 |
| C26 |
C32 |
H24 |
119.8 |
119.9 |
| C26 |
C22 |
C25 |
118.6 |
120.0 |
| C32 |
C36 |
H23 |
120.2 |
120.0 |
| C22 |
C13 |
N2 |
111.7 |
109.5 |
| N2 |
C13 |
H2 |
108.9 |
109.5 |
| N2 |
C13 |
H3 |
108.9 |
109.5 |
| C13 |
C22 |
C25 |
120.6 |
120.0 |
| C22 |
C13 |
H2 |
108.9 |
109.5 |
| C22 |
C13 |
H3 |
108.9 |
109.5 |
| C22 |
C25 |
C31 |
120.6 |
120.0 |
| C22 |
C25 |
H21 |
119.7 |
120.0 |
| C8 |
C4 |
C10 |
131.3 |
126.2 |
| C36 |
C31 |
H22 |
119.9 |
120.0 |
| C4 |
C10 |
O18 |
122.2 |
120.0 |
| C4 |
C10 |
N14 |
114.8 |
120.0 |
| C31 |
C25 |
H21 |
119.7 |
120.0 |
| C25 |
C31 |
H22 |
119.9 |
119.9 |
| O18 |
C10 |
N14 |
123.0 |
120.0 |
| C10 |
N14 |
C19 |
123.3 |
120.0 |
| C10 |
N14 |
H14 |
118.4 |
120.0 |
| N14 |
C19 |
C23 |
118.9 |
109.5 |
| C19 |
N14 |
H14 |
118.3 |
119.9 |
| N14 |
C19 |
H15 |
107.1 |
109.5 |
| N14 |
C19 |
H16 |
107.1 |
109.5 |
| C23 |
C19 |
H15 |
107.1 |
109.5 |
| C23 |
C19 |
H16 |
107.1 |
109.5 |
| C27 |
C33 |
C35 |
120.3 |
120.0 |
| C33 |
C27 |
H17 |
119.6 |
120.0 |
| C27 |
C33 |
H18 |
119.9 |
120.0 |
| C23 |
C28 |
C34 |
120.8 |
120.0 |
| C23 |
C28 |
H11 |
119.6 |
120.1 |
| C33 |
C35 |
C34 |
119.7 |
120.0 |
| C35 |
C33 |
H18 |
119.8 |
120.1 |
| C33 |
C35 |
H19 |
120.2 |
120.0 |
| C28 |
C34 |
C35 |
120.0 |
120.0 |
| C34 |
C28 |
H11 |
119.6 |
120.0 |
| C28 |
C34 |
H20 |
120.0 |
120.0 |
| C34 |
C35 |
H19 |
120.2 |
120.0 |
| C35 |
C34 |
H20 |
120.0 |
120.0 |
| H2 |
C13 |
H3 |
109.5 |
109.4 |
| H4 |
C15 |
H5 |
109.4 |
109.5 |
| H6 |
C17 |
H7 |
109.5 |
109.7 |
| H15 |
C19 |
H16 |
109.5 |
109.5 |
| H25 |
C9 |
H26 |
109.5 |
109.9 |
Torsion Angles for 9LG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C29 |
C30 |
C24 |
H9 |
180.1 |
180.3 |
| C30 |
C29 |
C21 |
H8 |
180.1 |
180.0 |
| C16 |
C24 |
C30 |
H9 |
180.0 |
180.0 |
| C29 |
C21 |
C6 |
S1 |
179.9 |
180.0 |
| C30 |
C24 |
C16 |
H9 |
180.0 |
180.0 |
| C24 |
C16 |
C6 |
S1 |
180.1 |
180.0 |
| C16 |
C6 |
C21 |
S1 |
180.2 |
180.3 |
| C21 |
C6 |
S1 |
N5 |
116.6 |
115.0 |
| C21 |
C6 |
C16 |
S1 |
179.8 |
179.7 |
| C16 |
C6 |
S1 |
N5 |
296.4 |
294.7 |
| F20 |
C16 |
C24 |
H9 |
0.1 |
360.0 |
| F20 |
C16 |
C6 |
S1 |
0.1 |
360.0 |
| O12 |
S1 |
C6 |
N5 |
115.4 |
246.5 |
| O11 |
S1 |
C6 |
N5 |
245.0 |
113.6 |
| C6 |
S1 |
N5 |
C9 |
290.6 |
270.0 |
| C6 |
S1 |
O12 |
N5 |
243.1 |
114.1 |
| O11 |
S1 |
O12 |
N5 |
121.2 |
237.0 |
| O12 |
S1 |
N5 |
C9 |
174.5 |
23.5 |
| C6 |
S1 |
O11 |
N5 |
116.5 |
245.9 |
| O12 |
S1 |
O11 |
N5 |
238.9 |
123.0 |
| O11 |
S1 |
N5 |
C9 |
45.5 |
156.4 |
| S1 |
N5 |
C15 |
H4 |
272.9 |
355.4 |
| S1 |
N5 |
C15 |
H5 |
32.6 |
235.3 |
| S1 |
N5 |
C9 |
C3 |
180.5 |
224.5 |
| S1 |
N5 |
C9 |
H25 |
300.5 |
344.0 |
| S1 |
N5 |
C9 |
H26 |
60.5 |
105.0 |
| C6 |
S1 |
N5 |
C15 |
70.0 |
90.1 |
| C17 |
C15 |
N5 |
H4 |
239.8 |
119.9 |
| C17 |
C15 |
N5 |
H5 |
120.2 |
240.0 |
| N5 |
C15 |
C17 |
H6 |
174.4 |
285.5 |
| N5 |
C15 |
C17 |
H7 |
294.5 |
165.1 |
| H4 |
C15 |
N5 |
H5 |
240.3 |
120.2 |
| C9 |
N5 |
C15 |
H4 |
54.0 |
175.5 |
| C9 |
N5 |
C15 |
H5 |
173.7 |
55.4 |
| H25 |
C9 |
N5 |
H26 |
240.0 |
238.9 |
| N5 |
C15 |
C17 |
H4 |
120.2 |
240.2 |
| N5 |
C15 |
C17 |
H5 |
239.8 |
120.0 |
| H4 |
C15 |
C17 |
H5 |
119.7 |
239.9 |
| H6 |
C17 |
C15 |
H7 |
240.0 |
120.4 |
| N5 |
C9 |
C3 |
H25 |
120.0 |
119.4 |
| N5 |
C9 |
C3 |
H26 |
240.0 |
240.6 |
| C17 |
C7 |
C8 |
H1 |
0.1 |
359.7 |
| C3 |
C7 |
C8 |
H1 |
180.2 |
180.0 |
| N5 |
C9 |
C3 |
N2 |
172.6 |
168.9 |
| C3 |
N2 |
C13 |
H2 |
26.7 |
333.9 |
| C3 |
N2 |
C13 |
H3 |
146.0 |
214.0 |
| C7 |
C8 |
C4 |
C10 |
180.7 |
180.0 |
| C32 |
C26 |
C22 |
C25 |
359.8 |
0.3 |
| C26 |
C32 |
C36 |
H23 |
179.9 |
180.0 |
| C26 |
C22 |
C13 |
N2 |
94.8 |
265.3 |
| C13 |
C22 |
C26 |
C25 |
180.4 |
179.7 |
| C26 |
C22 |
C13 |
H2 |
334.4 |
25.3 |
| C26 |
C22 |
C13 |
H3 |
215.1 |
145.3 |
| C26 |
C22 |
C25 |
C31 |
0.2 |
359.7 |
| C26 |
C22 |
C25 |
H21 |
180.2 |
179.7 |
| C36 |
C32 |
C26 |
H10 |
180.2 |
180.0 |
| C26 |
C32 |
C36 |
H24 |
180.0 |
180.0 |
| C32 |
C36 |
C31 |
H22 |
180.1 |
180.3 |
| N2 |
C13 |
C22 |
C25 |
275.2 |
85.0 |
| C22 |
C13 |
N2 |
H2 |
239.6 |
120.0 |
| C22 |
C13 |
N2 |
H3 |
120.3 |
239.9 |
| H2 |
C13 |
N2 |
H3 |
240.7 |
120.0 |
| C26 |
C22 |
C13 |
C25 |
179.6 |
180.3 |
| N2 |
C13 |
C22 |
H2 |
120.3 |
240.0 |
| N2 |
C13 |
C22 |
H3 |
239.7 |
120.0 |
| C13 |
C22 |
C25 |
C31 |
179.8 |
180.0 |
| C13 |
C22 |
C25 |
H21 |
359.8 |
360.0 |
| H2 |
C13 |
C22 |
H3 |
119.4 |
240.0 |
| C25 |
C22 |
C13 |
N2 |
275.2 |
85.0 |
| C25 |
C22 |
C13 |
H2 |
154.8 |
205.0 |
| C25 |
C22 |
C13 |
H3 |
35.5 |
325.0 |
| C31 |
C25 |
C22 |
H21 |
180.0 |
180.1 |
| C22 |
C25 |
C31 |
H22 |
179.8 |
180.0 |
| C8 |
C4 |
C10 |
O18 |
208.3 |
355.5 |
| C8 |
C4 |
C10 |
N14 |
28.6 |
175.5 |
| C26 |
C32 |
C36 |
C31 |
359.9 |
359.7 |
| C36 |
C31 |
C25 |
H21 |
179.8 |
180.1 |
| C25 |
C31 |
C36 |
H22 |
180.0 |
180.0 |
| O18 |
C10 |
C4 |
N14 |
179.7 |
180.0 |
| C4 |
C10 |
N14 |
C19 |
179.4 |
186.2 |
| C4 |
C10 |
N14 |
H14 |
359.5 |
6.2 |
| C22 |
C25 |
C31 |
H21 |
180.0 |
179.9 |
| C36 |
C31 |
C25 |
H22 |
180.0 |
180.0 |
| C4 |
C10 |
O18 |
N14 |
180.3 |
180.0 |
| O18 |
C10 |
N14 |
C19 |
359.7 |
6.2 |
| O18 |
C10 |
N14 |
H14 |
179.7 |
186.2 |
| C4 |
C10 |
N14 |
O18 |
179.7 |
180.0 |
| C10 |
N14 |
C19 |
C23 |
82.0 |
180.0 |
| C19 |
N14 |
C10 |
H14 |
180.0 |
180.0 |
| C10 |
N14 |
C19 |
H15 |
203.3 |
300.0 |
| C10 |
N14 |
C19 |
H16 |
320.7 |
60.0 |
| C10 |
N14 |
C19 |
H14 |
180.0 |
180.0 |
| C23 |
C19 |
N14 |
H15 |
238.7 |
240.0 |
| C23 |
C19 |
N14 |
H16 |
121.3 |
120.0 |
| H15 |
C19 |
N14 |
H16 |
242.7 |
240.0 |
| C23 |
C19 |
N14 |
H14 |
262.0 |
0.0 |
| N14 |
C19 |
C23 |
H15 |
121.3 |
120.0 |
| N14 |
C19 |
C23 |
H16 |
238.7 |
240.0 |
| C19 |
C23 |
C28 |
C34 |
180.1 |
180.0 |
| C19 |
C23 |
C28 |
H11 |
0.1 |
359.7 |
| H15 |
C19 |
C23 |
H16 |
117.3 |
120.1 |
| C27 |
C23 |
C19 |
H15 |
267.3 |
150.0 |
| C27 |
C23 |
C19 |
H16 |
149.9 |
30.0 |
| C27 |
C23 |
C28 |
C34 |
359.7 |
360.0 |
| C27 |
C23 |
C28 |
H11 |
179.7 |
179.7 |
| C27 |
C33 |
C35 |
C34 |
0.1 |
0.0 |
| C35 |
C33 |
C27 |
H18 |
180.0 |
180.0 |
| C27 |
C33 |
C35 |
H19 |
180.1 |
180.0 |
| C23 |
C28 |
C34 |
C35 |
0.2 |
0.0 |
| C34 |
C28 |
C23 |
H11 |
180.0 |
180.3 |
| C23 |
C28 |
C34 |
H20 |
180.2 |
179.7 |
| C35 |
C33 |
C27 |
H17 |
179.8 |
180.0 |
| C27 |
C33 |
C35 |
H18 |
180.0 |
180.0 |
| C28 |
C34 |
C35 |
C33 |
359.9 |
360.0 |
| C34 |
C35 |
C33 |
H19 |
180.0 |
180.1 |
| C33 |
C35 |
C34 |
H20 |
179.9 |
180.3 |
| C23 |
C28 |
C34 |
H11 |
180.0 |
179.7 |
| C33 |
C35 |
C34 |
C28 |
359.9 |
360.0 |
| C28 |
C34 |
C35 |
H19 |
179.9 |
180.0 |
| C35 |
C34 |
C28 |
H20 |
180.0 |
180.3 |
| C34 |
C35 |
C33 |
H18 |
180.1 |
180.0 |
| C33 |
C35 |
C34 |
H19 |
180.0 |
179.9 |
| C35 |
C34 |
C28 |
H11 |
180.2 |
180.3 |
| C28 |
C34 |
C35 |
H20 |
180.0 |
179.7 |
| H1 |
C8 |
C4 |
C10 |
0.7 |
0.0 |
| C22 |
C13 |
H2 |
N2 |
122.0 |
240.0 |
| N2 |
C13 |
H2 |
H3 |
119.0 |
240.0 |
| H2 |
C13 |
C22 |
C25 |
154.8 |
205.0 |
| C22 |
C13 |
H2 |
H3 |
241.0 |
120.0 |
| C22 |
C13 |
H3 |
N2 |
238.0 |
120.0 |
| N2 |
C13 |
H3 |
H2 |
241.0 |
120.0 |
| H3 |
C13 |
C22 |
C25 |
35.5 |
325.0 |
| C22 |
C13 |
H3 |
H2 |
119.0 |
240.0 |
| N5 |
C15 |
H4 |
H5 |
119.6 |
239.8 |
| C17 |
C15 |
H4 |
H5 |
240.4 |
120.2 |
| H4 |
C15 |
C17 |
H6 |
54.3 |
45.4 |
| H4 |
C15 |
C17 |
H7 |
174.3 |
285.0 |
| N5 |
C15 |
H5 |
H4 |
240.4 |
120.1 |
| C17 |
C15 |
H5 |
H4 |
119.6 |
239.8 |
| H5 |
C15 |
C17 |
H6 |
294.6 |
165.5 |
| H5 |
C15 |
C17 |
H7 |
54.7 |
45.1 |
| H6 |
C17 |
C15 |
H4 |
54.3 |
45.4 |
| H6 |
C17 |
C15 |
H5 |
294.6 |
165.5 |
| C15 |
C17 |
H6 |
H7 |
120.1 |
239.6 |
| H7 |
C17 |
C15 |
H4 |
174.3 |
285.0 |
| H7 |
C17 |
C15 |
H5 |
54.7 |
45.1 |
| C15 |
C17 |
H7 |
H6 |
239.9 |
120.4 |
| H8 |
C21 |
C6 |
S1 |
359.9 |
359.9 |
| H9 |
C24 |
C16 |
F20 |
0.1 |
360.0 |
| H10 |
C26 |
C32 |
C36 |
180.2 |
180.0 |
| H10 |
C26 |
C32 |
H24 |
0.2 |
360.0 |
| H10 |
C26 |
C22 |
C25 |
179.8 |
180.3 |
| C23 |
C28 |
H11 |
C34 |
180.0 |
180.3 |
| H11 |
C28 |
C34 |
C35 |
180.2 |
180.3 |
| H11 |
C28 |
C34 |
H20 |
0.2 |
0.0 |
| H12 |
C30 |
C29 |
H13 |
359.8 |
0.3 |
| H12 |
C30 |
C24 |
H9 |
0.1 |
360.0 |
| H13 |
C29 |
C30 |
H12 |
359.8 |
0.3 |
| H13 |
C29 |
C21 |
H8 |
0.1 |
359.8 |
| C10 |
N14 |
H14 |
C19 |
180.0 |
180.0 |
| H14 |
N14 |
C19 |
C23 |
262.0 |
0.0 |
| H14 |
N14 |
C19 |
H15 |
23.3 |
120.0 |
| H14 |
N14 |
C19 |
H16 |
140.6 |
240.0 |
| N14 |
C19 |
H15 |
C23 |
231.5 |
240.0 |
| H15 |
C19 |
N14 |
H14 |
23.3 |
120.0 |
| N14 |
C19 |
H15 |
H16 |
115.7 |
120.0 |
| C23 |
C19 |
H15 |
H16 |
244.3 |
240.0 |
| N14 |
C19 |
H16 |
C23 |
128.5 |
120.0 |
| H16 |
C19 |
N14 |
H14 |
140.6 |
240.0 |
| N14 |
C19 |
H16 |
H15 |
244.3 |
240.0 |
| C23 |
C19 |
H16 |
H15 |
115.7 |
120.0 |
| H17 |
C27 |
C33 |
C35 |
179.8 |
180.0 |
| H17 |
C27 |
C33 |
H18 |
359.8 |
360.0 |
| C27 |
C33 |
H18 |
C35 |
180.0 |
180.0 |
| H18 |
C33 |
C27 |
H17 |
359.8 |
360.0 |
| H18 |
C33 |
C35 |
C34 |
180.1 |
180.0 |
| H18 |
C33 |
C35 |
H19 |
0.1 |
360.0 |
| C33 |
C35 |
H19 |
C34 |
180.0 |
180.1 |
| H19 |
C35 |
C33 |
H18 |
0.1 |
360.0 |
| H19 |
C35 |
C34 |
H20 |
359.9 |
0.3 |
| C28 |
C34 |
H20 |
C35 |
180.0 |
180.3 |
| H20 |
C34 |
C28 |
H11 |
0.2 |
0.0 |
| H20 |
C34 |
C35 |
H19 |
359.9 |
0.3 |
| C22 |
C25 |
H21 |
C31 |
180.0 |
180.1 |
| H21 |
C25 |
C31 |
H22 |
359.8 |
0.0 |
| H22 |
C31 |
C25 |
H21 |
359.8 |
0.0 |
| H23 |
C36 |
C31 |
H22 |
0.1 |
0.0 |
| C26 |
C32 |
H24 |
C36 |
180.0 |
180.0 |
| H24 |
C32 |
C26 |
H10 |
0.2 |
360.0 |
| H24 |
C32 |
C36 |
H23 |
359.9 |
0.0 |
| N5 |
C9 |
H25 |
C3 |
239.9 |
242.2 |
| N5 |
C9 |
H25 |
H26 |
120.0 |
121.0 |
| N5 |
C9 |
H26 |
C3 |
120.1 |
117.8 |
| N5 |
C9 |
H26 |
H25 |
240.0 |
239.0 |