PDB Chemical Component 9KP

Ideal Model

Chemical Description

Name (E)-N~6~-[(2E)-1-carboxy-3-(2-carboxyphenyl)prop-2-en-1-ylidene]-L-lysine
Formula C17 H20 N2 O6
Formal charge 0
Molecular weight 348.351 g/mol
Component type L-peptide linking
Nonstandard Parent Id LYS

Chemical features

Atom count 45
Chiral atom count 1
Chiral atoms CA
Observed leaving atoms H2 OXT HXT
Bond count 45
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) (E)-N~6~-[(2E)-1-carboxy-3-(2-carboxyphenyl)prop-2-en-1-ylidene]-L-lysine
Systematic name (OpenEye OEToolkits) 2-[(~{E},3~{E})-3-[(5~{S})-5-azanyl-6-oxidanyl-6-oxidanylidene-hexyl]imino-4-oxidanyl-4-oxidanylidene-but-1-enyl]benzoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@@H](CCCCN=C(\C=C\c1ccccc1C(O)=O)C(O)=O)C(O)=O
SMILES (CACTVS) N[CH](CCCCN=C(C=Cc1ccccc1C(O)=O)C(O)=O)C(O)=O
Stereo SMILES (OpenEye) c1ccc(c(c1)/C=C/C(=N\CCCC[C@@H](C(=O)O)N)/C(=O)O)C(=O)O
InChI descriptor InChI=1S/C17H20N2O6/c18-13(16(22)23)7-3-4-10-19-14(17(24)25)9-8-11-5-1-2-6-12(11)15(20)21/h1-2,5-6,8-9,13H,3-4,7,10,18H2,(H,20,21)(H,22,23)(H,24,25)/b9-8+,19-14+/t13-/m0/s1
InChIKey descriptor SPDZYZMDISKQIF-OQQJUMBRSA-N

Status Information

Last modified 2023-11-03
Created 2017-05-18
Release status REL
Model PDB code 5VTN
Processing site RCSB