PDB Chemical Component 9KP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9KP
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
CA |
1.526 |
1.507 |
| C |
O |
1.181 |
1.208 |
| C19 |
C20 |
1.387 |
1.386 |
| C19 |
C18 |
1.378 |
1.380 |
| C20 |
C21 |
1.393 |
1.380 |
| CA |
N |
1.429 |
1.469 |
| CA |
CB |
1.522 |
1.530 |
| C18 |
C17 |
1.431 |
1.394 |
| C21 |
C16 |
1.426 |
1.396 |
| CG |
CB |
1.482 |
1.530 |
| CG |
CD |
1.581 |
1.530 |
| CE |
CD |
1.522 |
1.530 |
| CE |
NZ |
1.448 |
1.465 |
| C17 |
C16 |
1.387 |
1.412 |
| C17 |
C22 |
1.466 |
1.475 |
| C16 |
C15 |
1.536 |
1.471 |
| O24 |
C22 |
1.259 |
1.215 |
| C14 |
C15 |
1.412 |
1.348 |
| C14 |
C10 |
1.517 |
1.468 |
| C22 |
O23 |
1.279 |
1.348 |
| NZ |
C10 |
1.309 |
1.304 |
| C10 |
C11 |
1.571 |
1.487 |
| C11 |
O13 |
1.232 |
1.214 |
| C11 |
O12 |
1.209 |
1.346 |
| C15 |
H1 |
1.080 |
1.080 |
| C18 |
H7 |
1.080 |
1.080 |
| C19 |
H3 |
1.080 |
1.080 |
| C20 |
H4 |
1.080 |
1.081 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.001 |
1.009 |
| CA |
HA |
1.100 |
1.090 |
| C |
OXT |
1.032 |
1.343 |
| CB |
H10 |
1.100 |
1.090 |
| CB |
H11 |
1.100 |
1.091 |
| CG |
H12 |
1.100 |
1.091 |
| CG |
H13 |
1.100 |
1.091 |
| CD |
H14 |
1.100 |
1.090 |
| CD |
H15 |
1.100 |
1.090 |
| CE |
H16 |
1.100 |
1.090 |
| CE |
H17 |
1.100 |
1.091 |
| O12 |
H18 |
0.950 |
0.966 |
| C14 |
H19 |
1.080 |
1.080 |
| C21 |
H20 |
1.080 |
1.080 |
| O23 |
H21 |
0.950 |
0.967 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for 9KP
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB |
111.9 |
109.5 |
| C |
CA |
HA |
103.9 |
109.5 |
| O |
C |
OXT |
122.4 |
120.0 |
| C19 |
C20 |
C21 |
119.9 |
120.5 |
| C20 |
C19 |
H3 |
121.0 |
119.7 |
| C19 |
C20 |
H4 |
120.1 |
119.8 |
| C19 |
C18 |
H7 |
118.5 |
120.0 |
| C21 |
C20 |
H4 |
120.1 |
119.7 |
| C20 |
C21 |
H20 |
118.4 |
120.0 |
| CA |
N |
H |
109.5 |
111.1 |
| CA |
N |
H2 |
109.5 |
111.0 |
| CB |
CA |
HA |
103.9 |
109.4 |
| CA |
CB |
H10 |
108.4 |
109.5 |
| CA |
CB |
H11 |
108.4 |
109.5 |
| C18 |
C17 |
C22 |
115.8 |
120.3 |
| CG |
CB |
H10 |
108.4 |
109.5 |
| CG |
CB |
H11 |
108.4 |
109.5 |
| CD |
CG |
H12 |
107.0 |
109.5 |
| CD |
CG |
H13 |
107.1 |
109.5 |
| CG |
CD |
H14 |
108.5 |
109.5 |
| CG |
CD |
H15 |
108.5 |
109.4 |
| CE |
CD |
H14 |
108.5 |
109.5 |
| CE |
CD |
H15 |
108.5 |
109.4 |
| NZ |
CE |
H16 |
109.0 |
109.5 |
| NZ |
CE |
H17 |
109.1 |
109.4 |
| C17 |
C22 |
O23 |
121.2 |
120.0 |
| C16 |
C15 |
H1 |
121.6 |
120.0 |
| C14 |
C15 |
H1 |
121.6 |
120.0 |
| C22 |
O23 |
H21 |
109.5 |
117.0 |
| C10 |
C11 |
O13 |
123.4 |
120.0 |
| C10 |
C11 |
O12 |
117.7 |
120.1 |
| O13 |
C11 |
O12 |
119.0 |
120.0 |
| C11 |
O12 |
H18 |
109.5 |
117.1 |
| H |
N |
H2 |
109.5 |
111.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| H10 |
CB |
H11 |
109.5 |
109.4 |
| H12 |
CG |
H13 |
109.5 |
109.4 |
| H14 |
CD |
H15 |
109.5 |
109.5 |
| H16 |
CE |
H17 |
109.5 |
109.5 |
Torsion Angles for 9KP
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
N |
H |
180.0 |
59.9 |
| C |
CA |
N |
H2 |
300.0 |
184.0 |
| CB |
CA |
C |
HA |
248.5 |
240.0 |
| C |
CA |
CB |
H10 |
161.1 |
295.0 |
| C |
CA |
CB |
H11 |
279.9 |
55.0 |
| O |
C |
CA |
CB |
52.7 |
100.0 |
| O |
C |
CA |
HA |
164.2 |
220.0 |
| O |
C |
OXT |
HXT |
360.0 |
360.0 |
| C20 |
C19 |
C18 |
H7 |
180.7 |
180.0 |
| C21 |
C20 |
C19 |
H4 |
180.0 |
179.8 |
| C19 |
C20 |
C21 |
H20 |
179.5 |
180.0 |
| C19 |
C18 |
C17 |
C22 |
180.5 |
180.0 |
| C21 |
C20 |
C19 |
H3 |
180.3 |
180.1 |
| C19 |
C20 |
C21 |
H4 |
180.0 |
180.2 |
| H |
N |
CA |
H2 |
240.0 |
235.9 |
| C |
CA |
CB |
HA |
111.5 |
120.1 |
| CB |
CA |
N |
H |
47.2 |
299.9 |
| CB |
CA |
N |
H2 |
167.2 |
64.0 |
| CG |
CB |
CA |
H10 |
239.4 |
240.0 |
| CG |
CB |
CA |
H11 |
120.6 |
120.0 |
| H10 |
CB |
CA |
H11 |
241.2 |
240.0 |
| C18 |
C17 |
C22 |
O23 |
228.8 |
6.1 |
| C21 |
C16 |
C15 |
H1 |
118.4 |
174.3 |
| CG |
CB |
CA |
HA |
289.0 |
54.9 |
| CA |
CB |
CG |
H10 |
120.6 |
120.0 |
| CA |
CB |
CG |
H11 |
239.4 |
240.0 |
| H10 |
CB |
CG |
H11 |
118.7 |
119.9 |
| CD |
CG |
CB |
H10 |
64.0 |
60.0 |
| CD |
CG |
CB |
H11 |
305.2 |
300.0 |
| CE |
CD |
CG |
H14 |
239.4 |
240.0 |
| CE |
CD |
CG |
H15 |
120.6 |
120.0 |
| H12 |
CG |
CD |
H13 |
117.3 |
120.0 |
| H14 |
CD |
CG |
H15 |
241.1 |
240.0 |
| CE |
CD |
CG |
H12 |
61.9 |
64.9 |
| CE |
CD |
CG |
H13 |
304.7 |
305.0 |
| CG |
CD |
CE |
H14 |
120.6 |
120.0 |
| CG |
CD |
CE |
H15 |
239.5 |
240.0 |
| H14 |
CD |
CE |
H15 |
118.9 |
120.0 |
| NZ |
CE |
CD |
H14 |
67.0 |
64.9 |
| NZ |
CE |
CD |
H15 |
308.1 |
304.9 |
| H16 |
CE |
NZ |
H17 |
119.5 |
120.0 |
| C17 |
C16 |
C15 |
H1 |
299.0 |
354.5 |
| C17 |
C22 |
O23 |
H21 |
178.5 |
179.9 |
| C14 |
C15 |
C16 |
H1 |
180.0 |
180.0 |
| O24 |
C22 |
O23 |
H21 |
0.0 |
360.0 |
| C16 |
C15 |
C14 |
H1 |
180.0 |
180.0 |
| NZ |
C10 |
C11 |
O12 |
354.7 |
355.3 |
| O13 |
C11 |
C10 |
O12 |
178.7 |
180.0 |
| C10 |
C11 |
O12 |
H18 |
178.8 |
180.0 |
| C10 |
C11 |
O13 |
O12 |
181.3 |
180.0 |
| O13 |
C11 |
O12 |
H18 |
0.0 |
0.0 |
| C10 |
C11 |
O12 |
O13 |
178.7 |
180.0 |
| H7 |
C18 |
C17 |
C22 |
0.5 |
359.9 |
| H3 |
C19 |
C20 |
C21 |
180.3 |
180.1 |
| H3 |
C19 |
C20 |
H4 |
0.3 |
0.2 |
| H3 |
C19 |
C18 |
H7 |
0.7 |
359.8 |
| C19 |
C20 |
H4 |
C21 |
180.0 |
179.8 |
| H4 |
C20 |
C19 |
H3 |
0.3 |
0.2 |
| H4 |
C20 |
C21 |
H20 |
359.5 |
359.9 |
| CA |
N |
H |
H2 |
120.0 |
124.1 |
| CA |
N |
H2 |
H |
240.0 |
235.9 |
| C |
CA |
HA |
CB |
242.8 |
240.0 |
| HA |
CA |
N |
H |
292.7 |
180.0 |
| HA |
CA |
N |
H2 |
52.7 |
304.1 |
| HA |
CA |
CB |
H10 |
49.6 |
175.0 |
| HA |
CA |
CB |
H11 |
168.4 |
294.9 |
| OXT |
C |
CA |
CB |
232.7 |
280.0 |
| OXT |
C |
CA |
HA |
344.2 |
40.0 |
| H10 |
CB |
CA |
HA |
49.6 |
175.0 |
| CA |
CB |
H10 |
H11 |
118.1 |
120.0 |
| CG |
CB |
H10 |
H11 |
241.9 |
240.0 |
| H11 |
CB |
CA |
HA |
168.4 |
294.9 |
| CA |
CB |
H11 |
H10 |
241.9 |
240.0 |
| CG |
CB |
H11 |
H10 |
118.1 |
120.0 |
| H12 |
CG |
CB |
H10 |
185.3 |
180.0 |
| H12 |
CG |
CB |
H11 |
66.6 |
60.1 |
| CD |
CG |
H12 |
H13 |
244.3 |
240.0 |
| H12 |
CG |
CD |
H14 |
182.5 |
185.0 |
| H12 |
CG |
CD |
H15 |
301.4 |
304.9 |
| H13 |
CG |
CB |
H10 |
302.6 |
299.9 |
| H13 |
CG |
CB |
H11 |
183.9 |
180.0 |
| CD |
CG |
H13 |
H12 |
115.7 |
120.0 |
| H13 |
CG |
CD |
H14 |
65.2 |
65.0 |
| H13 |
CG |
CD |
H15 |
184.1 |
185.0 |
| H14 |
CD |
CG |
H12 |
182.5 |
185.0 |
| H14 |
CD |
CG |
H13 |
65.2 |
65.0 |
| CG |
CD |
H14 |
H15 |
118.2 |
120.0 |
| CE |
CD |
H14 |
H15 |
241.7 |
240.0 |
| H15 |
CD |
CG |
H12 |
301.4 |
304.9 |
| H15 |
CD |
CG |
H13 |
184.1 |
185.0 |
| CG |
CD |
H15 |
H14 |
241.7 |
240.0 |
| CE |
CD |
H15 |
H14 |
118.3 |
120.0 |
| H16 |
CE |
CD |
H14 |
187.2 |
185.0 |
| H16 |
CE |
CD |
H15 |
68.3 |
65.0 |
| NZ |
CE |
H16 |
H17 |
240.8 |
240.1 |
| H17 |
CE |
CD |
H14 |
306.7 |
305.0 |
| H17 |
CE |
CD |
H15 |
187.8 |
185.0 |
| NZ |
CE |
H17 |
H16 |
119.2 |
120.0 |
| H19 |
C14 |
C15 |
H1 |
180.7 |
186.7 |
| H20 |
C21 |
C20 |
H4 |
359.5 |
359.9 |