PDB Chemical Component 9K8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9K8

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.516	1.507
C1	C	1.516	1.530
C2	C3	1.398	1.383
C2	C7	1.408	1.384
C3	C4	1.387	1.379
O4	C10	1.443	1.444
O4	C13	1.409	1.444
O5	C12	1.422	1.429
C7	C6	1.388	1.379
C7	S	1.687	1.762
C8	O2	1.205	1.214
C8	C5	1.485	1.477
C8	O3	1.337	1.347
C9	C10	1.506	1.530
C9	O3	1.447	1.452
C10	C11	1.534	1.545
C11	C12	1.535	1.546
C11	O6	1.424	1.429
C12	C13	1.527	1.545
C13	N	1.456	1.465
C14	N	1.371	1.363
C14	N1	1.304	1.301
C15	C16	1.390	1.405
C15	C18	1.407	1.405
C15	N1	1.387	1.355
C16	N	1.382	1.372
C16	N2	1.340	1.329
C5	C4	1.390	1.396
C5	C6	1.388	1.397
S	O1	1.412	1.421
S	O	1.406	1.421
S	F	1.341	1.609
N2	C17	1.337	1.317
C17	N3	1.339	1.320
N3	C18	1.353	1.328
C18	N4	1.338	1.384
C1	H1	1.100	1.090
C1	H2	1.100	1.090
C3	H3	1.080	1.080
O5	H4	0.950	0.967
C9	H5	1.100	1.090
C9	H6	1.099	1.091
C10	H7	1.100	1.090
C11	H8	1.100	1.090
C12	H9	1.101	1.089
C13	H10	1.100	1.089
C14	H11	1.080	1.080
C4	H12	1.080	1.080
C6	H13	1.080	1.080
C	H15	1.100	1.090
C	H16	1.100	1.090
C	H17	1.100	1.090
O6	H18	0.950	0.967
C17	H19	1.080	1.079
N4	H20	1.000	0.970
N4	H21	1.000	0.971

Bond Angles for 9K8

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C	115.6	109.4
C1	C2	C3	117.9	119.9
C1	C2	C7	125.6	119.8
C2	C1	H1	107.9	109.4
C2	C1	H2	107.9	109.5
C	C1	H1	107.9	109.5
C	C1	H2	107.9	109.5
C1	C	H15	109.5	109.5
C1	C	H16	109.5	109.5
C1	C	H17	109.5	109.5
C3	C2	C7	116.5	120.3
C2	C3	C4	121.9	120.2
C2	C3	H3	119.1	119.9
C2	C7	C6	121.7	120.2
C2	C7	S	125.9	119.9
C3	C4	C5	120.5	119.9
C4	C3	H3	119.0	119.9
C3	C4	H12	119.7	120.1
C10	O4	C13	107.8	105.3
O4	C10	C9	110.4	110.4
O4	C10	C11	107.3	104.8
O4	C10	H7	108.2	110.4
O4	C13	C12	105.1	104.8
O4	C13	N	108.5	110.3
O4	C13	H10	110.3	110.4
O5	C12	C11	113.3	110.5
O5	C12	C13	111.9	110.5
C12	O5	H4	109.5	114.0
O5	C12	H9	111.0	110.5
C6	C7	S	112.4	119.9
C7	C6	C5	120.5	119.8
C7	C6	H13	119.8	120.1
C7	S	O1	110.6	106.4
C7	S	O	110.6	106.4
C7	S	F	106.5	107.3
O2	C8	C5	123.8	120.0
O2	C8	O3	123.7	120.0
C5	C8	O3	112.5	120.0
C8	C5	C4	123.0	120.1
C8	C5	C6	118.2	120.2
C8	O3	C9	116.3	117.0
C10	C9	O3	110.5	109.4
C9	C10	C11	116.2	110.3
C10	C9	H5	109.2	109.5
C10	C9	H6	109.2	109.5
C9	C10	H7	107.4	110.3
O3	C9	H5	109.2	109.4
O3	C9	H6	109.2	109.4
C10	C11	C12	103.6	104.1
C10	C11	O6	111.0	110.5
C11	C10	H7	107.1	110.4
C10	C11	H8	108.8	110.5
C12	C11	O6	114.0	110.5
C11	C12	C13	101.5	104.0
C12	C11	H8	108.8	110.5
C11	C12	H9	109.4	110.5
O6	C11	H8	110.4	110.6
C11	O6	H18	109.5	114.1
C12	C13	N	114.5	110.3
C13	C12	H9	109.4	110.7
C12	C13	H10	108.7	110.4
C13	N	C14	127.5	126.3
C13	N	C16	127.1	126.3
N	C13	H10	109.6	110.5
N	C14	N1	114.5	110.0
C14	N	C16	105.4	107.4
N	C14	H11	122.8	125.0
C14	N1	C15	104.0	109.4
N1	C14	H11	122.7	125.0
C16	C15	C18	116.6	118.2
C16	C15	N1	110.5	107.1
C15	C16	N	105.7	106.0
C15	C16	N2	126.9	119.1
C18	C15	N1	132.9	134.7
C15	C18	N3	118.0	118.5
C15	C18	N4	123.4	120.7
N	C16	N2	127.4	134.9
C16	N2	C17	111.0	120.6
C4	C5	C6	118.7	119.7
C5	C4	H12	119.8	120.1
C5	C6	H13	119.7	120.0
O1	S	O	120.5	123.1
O1	S	F	62.6	106.4
O	S	F	136.9	106.4
N2	C17	N3	128.8	122.4
N2	C17	H19	115.6	118.8
C17	N3	C18	118.7	121.2
N3	C17	H19	115.6	118.8
N3	C18	N4	118.5	120.8
C18	N4	H20	109.5	120.0
C18	N4	H21	109.5	120.0
H1	C1	H2	109.5	109.5
H5	C9	H6	109.5	109.5
H15	C	H16	109.5	109.4
H15	C	H17	109.5	109.5
H16	C	H17	109.5	109.5
H20	N4	H21	109.4	120.0

Torsion Angles for 9K8

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C	C1	C2	H1	239.1	240.1
C	C1	C2	H2	120.9	120.0
C2	C1	C	H15	180.0	60.0
C2	C1	C	H16	300.0	180.0
C2	C1	C	H17	60.0	300.0
C3	C2	C1	C7	178.4	180.3
C1	C2	C3	C4	178.9	180.0
C1	C2	C3	H3	358.8	360.0
C1	C2	C7	C6	179.1	180.0
C1	C2	C7	S	359.4	360.0
H1	C1	C2	H2	241.8	240.0
C	C1	C2	C3	279.9	265.0
C	C1	C2	C7	101.5	84.7
C2	C1	C	H1	120.9	119.9
C2	C1	C	H2	239.1	240.0
H1	C1	C	H2	118.2	120.1
H15	C	C1	H16	240.0	240.0
H15	C	C1	H17	120.0	120.0
H16	C	C1	H17	240.0	240.0
C3	C2	C1	C	279.9	265.0
C1	C2	C3	C7	181.5	179.7
C3	C2	C1	H1	40.8	25.0
C3	C2	C1	H2	159.0	145.0
C3	C2	C7	C6	0.7	359.7
C3	C2	C7	S	181.0	179.7
C2	C3	C4	C5	4.6	0.0
C4	C3	C2	H3	180.0	180.0
C2	C3	C4	H12	184.6	179.9
C7	C2	C1	C	101.5	84.7
C1	C2	C7	C3	178.4	180.3
C7	C2	C1	H1	222.4	204.7
C7	C2	C1	H2	340.6	324.7
C7	C2	C3	C4	357.4	0.3
C7	C2	C3	H3	177.4	180.2
C6	C7	C2	S	179.7	180.0
C2	C7	C6	C5	359.3	360.0
C2	C7	C6	H13	179.3	180.0
C2	C7	S	O1	311.3	90.1
C2	C7	S	O	175.2	222.9
C2	C7	S	F	17.6	336.5
C4	C3	C2	C7	357.4	0.3
C2	C3	C4	H3	180.0	180.0
C8	C5	C4	C3	178.7	180.0
C3	C4	C5	C6	355.6	359.7
C5	C4	C3	H12	180.0	180.1
C10	O4	C13	C12	324.4	319.4
C10	O4	C13	N	201.6	200.6
C10	O4	C13	H10	81.4	78.3
O4	C10	C9	O3	296.8	66.5
C9	C10	O4	C11	127.6	118.8
O4	C10	C9	H5	56.9	186.5
O4	C10	C9	H6	176.6	306.5
C9	C10	O4	H7	242.8	237.7
O4	C10	C11	C12	6.7	336.0
O4	C10	C11	O6	243.9	217.4
C11	C10	O4	H7	115.2	118.9
O4	C10	C11	H8	122.3	94.6
C13	O4	C10	C9	145.5	159.3
C13	O4	C10	C11	17.9	40.6
C13	O4	C10	H7	262.7	281.6
O5	C12	C13	O4	159.4	142.6
C11	C12	C13	O4	38.3	24.0
C12	C13	O4	N	122.9	118.8
O4	C13	C12	H9	282.8	265.3
C12	C13	O4	H10	243.0	241.1
O4	C13	N	C14	56.3	23.6
O4	C13	N	C16	235.4	203.5
N	C13	O4	H10	120.1	122.4
O4	C13	C12	O5	159.4	142.6
C10	C11	C12	O5	213.6	241.4
O5	C12	C11	O6	334.3	0.0
C11	C12	O5	C13	114.0	114.6
O5	C12	C11	H8	98.0	122.7
C11	C12	O5	H9	236.6	237.4
O5	C12	C13	N	278.3	261.4
C13	C12	O5	H9	122.5	122.8
O5	C12	C13	H10	41.3	23.8
C2	C7	C6	S	180.2	180.0
C6	C7	S	O1	131.6	270.0
C6	C7	S	O	355.5	42.9
C6	C7	S	F	197.9	156.4
C8	C5	C6	C7	179.6	180.0
C4	C5	C6	C7	2.5	0.3
C5	C6	C7	H13	180.0	180.0
C2	C7	S	C6	179.7	180.0
S	C7	C6	C5	179.0	180.0
S	C7	C6	H13	359.0	360.0
O1	S	C7	O	136.1	227.2
O1	S	C7	F	293.7	113.6
O	S	C7	F	157.6	246.4
C5	C8	O2	O3	179.6	179.9
O2	C8	C5	C4	171.7	180.0
O2	C8	C5	C6	354.8	0.3
O2	C8	O3	C9	359.3	359.9
C3	C4	C5	C8	178.7	180.0
C7	C6	C5	C8	179.6	180.0
O2	C8	C5	O3	180.3	180.1
C5	C8	O3	C9	179.7	180.0
C4	C5	C8	C6	176.9	179.7
C8	C5	C4	H12	358.7	0.1
C8	C5	C6	H13	359.6	0.0
O2	C8	O3	C5	179.7	179.9
O3	C8	C5	C4	351.4	359.9
O3	C8	C5	C6	174.5	180.2
C10	C9	O3	C8	150.1	180.0
C8	O3	C9	H5	30.0	60.0
C8	O3	C9	H6	270.3	300.1
C9	C10	O4	C13	145.5	159.3
O4	C10	C9	C11	237.6	244.7
O4	C10	C9	H7	117.7	122.4
C8	O3	C9	C10	150.1	180.0
O3	C9	C10	H5	239.8	240.0
O3	C9	C10	H6	120.1	120.0
C9	C10	C11	C12	242.6	217.2
C9	C10	C11	O6	119.9	98.5
C11	C10	C9	H7	240.2	237.7
C9	C10	C11	H8	358.3	335.8
H5	C9	C10	H6	240.3	239.9
O3	C9	C10	C11	59.2	181.8
C10	C9	O3	H5	120.2	120.0
C10	C9	O3	H6	239.9	240.0
O3	C9	C10	H7	179.0	304.1
H5	C9	O3	H6	119.7	120.0
C11	C10	O4	C13	17.9	40.6
O4	C10	C11	C9	124.1	118.8
O4	C10	C11	H7	244.1	241.1
O5	C12	C11	C10	213.6	241.4
C11	C10	C9	O3	59.2	181.8
C11	C10	C9	H5	179.4	301.8
C11	C10	C9	H6	299.1	61.9
C9	C10	C11	H7	120.0	122.2
C12	C11	C10	O6	122.8	118.6
C10	C11	C12	C13	333.7	360.0
C12	C11	C10	H8	244.4	241.4
C10	C11	C12	H9	89.3	118.8
O6	C11	C10	H8	121.6	122.7
C10	C11	O6	H18	180.0	180.0
O4	C13	C12	C11	38.3	24.0
O5	C12	C11	C13	239.9	241.4
C11	C12	O5	H4	180.0	298.6
O5	C12	C11	H9	124.3	122.6
C10	C11	C12	O6	239.3	241.4
C12	C11	C10	H7	122.6	94.9
C10	C11	C12	H8	115.6	118.7
O6	C11	C12	H8	236.4	237.3
C12	C11	O6	H18	63.5	65.3
C11	C12	C13	N	157.2	142.8
C13	C12	C11	H9	244.4	241.2
C11	C12	C13	H10	280.2	265.2
C10	C11	O6	C12	116.5	114.6
O6	C11	C10	H7	359.9	336.3
C10	C11	O6	H8	239.3	237.3
O6	C11	C12	C13	94.4	118.6
C12	C11	O6	H8	122.8	122.6
O6	C11	C12	H9	210.0	237.4
O4	C13	C12	N	241.1	241.2
O4	C13	C12	H10	118.1	118.9
O5	C12	C13	C11	121.1	118.6
C13	C12	O5	H4	66.0	184.0
O5	C12	C13	H9	236.6	237.3
C13	C12	C11	O6	94.4	118.6
C13	C12	C11	H8	218.1	241.3
C11	C12	C13	H9	115.5	118.7
C12	C13	N	C14	299.3	268.2
C12	C13	N	C16	118.4	88.2
N	C13	C12	H10	237.0	237.6
O4	C13	N	C12	117.0	115.3
O4	C13	N	H10	239.5	237.7
N	C13	C12	H9	41.7	24.1
C12	C13	N	H10	122.5	122.3
C13	N	C14	N1	177.8	180.0
C14	N	C13	C16	181.0	180.1
C13	N	C14	H11	357.8	359.7
C15	C16	N	C13	181.2	180.0
C13	N	C16	N2	0.9	0.1
C13	N	C14	C16	179.2	179.9
C14	N	C13	H10	176.9	145.9
N	C14	N1	C15	1.7	359.9
N1	C14	N	H11	180.0	180.3
C15	C16	N	C14	0.4	359.9
C14	N	C16	N2	180.1	180.0
N1	C14	N	C16	358.6	0.1
N	C14	N1	H11	180.0	179.7
C16	C15	N1	C14	358.6	0.0
C18	C15	N1	C14	179.8	180.0
C13	N	C16	C15	181.2	180.0
C14	N	C16	C15	0.4	359.9
C14	N1	C15	C16	358.6	0.0
C18	C15	C16	N1	179.0	180.0
C16	C15	C18	N3	359.1	0.0
C16	C15	C18	N4	182.7	180.0
N	C16	C15	N2	179.7	180.1
C15	C16	N2	C17	0.7	0.0
C14	N1	C15	C18	179.8	180.0
C16	C15	C18	N1	181.2	180.0
C18	C15	C16	N	179.7	180.0
C18	C15	C16	N2	360.0	359.9
C17	N3	C18	C15	1.2	360.0
N3	C18	C15	N4	176.3	180.1
C15	C18	N4	H20	176.3	0.0
C15	C18	N4	H21	296.3	180.0
C15	N1	C14	H11	181.7	180.3
C16	C15	N1	C18	178.8	180.0
N1	C15	C16	N	0.6	0.0
N1	C15	C16	N2	180.9	180.0
N1	C15	C18	N3	177.9	180.0
N1	C15	C18	N4	1.5	360.0
C13	N	C16	C14	180.8	180.1
C16	N	C13	H10	355.9	325.8
C16	N	C14	N1	358.6	0.1
C16	N	C14	H11	178.6	179.7
N	C16	C15	C18	179.7	180.0
N	C16	C15	N1	0.6	0.0
C15	C16	N	N2	180.3	179.9
N	C16	N2	C17	181.1	179.9
N2	C16	C15	C18	360.0	359.9
N2	C16	C15	N1	180.9	180.0
C15	C16	N2	N	179.6	180.1
C16	N2	C17	N3	359.6	0.0
C16	N2	C17	H19	179.6	180.0
C5	C4	C3	H3	184.6	180.1
C3	C4	C5	H12	180.0	179.9
C7	C6	C5	C4	2.5	0.3
C4	C5	C8	O3	351.4	359.9
C8	C5	C4	C6	183.1	180.3
C4	C5	C6	H13	182.5	180.3
C5	C6	C7	S	179.0	180.0
C7	C6	C5	H13	180.0	180.0
C6	C5	C8	O3	174.5	180.2
C8	C5	C6	C4	177.1	179.7
C6	C5	C4	H12	175.6	179.8
C7	S	O1	O	228.9	122.9
C7	S	O1	F	98.5	245.8
O	S	O1	F	229.6	122.9
C7	S	O	O1	131.1	237.1
C7	S	O	F	212.3	114.2
O1	S	O	F	81.2	237.1
C7	S	F	O1	255.0	113.6
C7	S	F	O	148.6	246.4
O1	S	F	O	253.6	132.9
N2	C17	N3	C18	359.5	360.0
N3	C17	N2	H19	180.0	180.0
C15	C18	N3	C17	1.2	360.0
N2	C17	N3	H19	180.0	180.0
C17	N3	C18	N4	177.7	180.1
N3	C18	C15	N1	177.9	180.0
C15	C18	N3	N4	183.5	179.9
C18	N3	C17	H19	179.5	180.0
N3	C18	N4	H20	0.0	180.0
N3	C18	N4	H21	120.0	360.0
N4	C18	C15	N1	1.5	360.0
C15	C18	N4	N3	176.3	180.1
H20	N4	C18	H21	240.0	180.0
C2	C1	H1	C	234.4	240.1
H1	C1	C2	C3	40.8	25.0
H1	C1	C2	C7	222.4	204.7
C2	C1	H1	H2	117.2	120.0
C	C1	H1	H2	242.8	239.9
H1	C1	C	H15	59.1	300.1
H1	C1	C	H16	179.1	60.0
H1	C1	C	H17	299.1	180.1
C2	C1	H2	C	125.6	120.0
H2	C1	C2	C3	159.0	145.0
H2	C1	C2	C7	340.6	324.7
C2	C1	H2	H1	242.8	240.0
C	C1	H2	H1	117.2	120.0
H2	C1	C	H15	300.9	180.0
H2	C1	C	H16	60.9	300.0
H2	C1	C	H17	180.9	60.0
H3	C3	C2	C7	177.4	180.2
C2	C3	H3	C4	180.0	180.0
H3	C3	C4	C5	184.6	180.1
H3	C3	C4	H12	4.6	360.0
H4	O5	C12	C11	180.0	298.6
H4	O5	C12	C13	66.0	184.0
H4	O5	C12	H9	303.4	61.2
C10	C9	H5	O3	239.1	240.0
H5	C9	C10	C11	179.4	301.8
C10	C9	H5	H6	119.6	120.1
H5	C9	C10	H7	299.2	64.1
O3	C9	H5	H6	240.5	240.1
C10	C9	H6	O3	120.9	120.0
H6	C9	C10	C11	299.1	61.9
C10	C9	H6	H5	240.4	239.9
H6	C9	C10	H7	58.9	184.2
O3	C9	H6	H5	119.5	120.0
H7	C10	O4	C13	262.7	281.6
O4	C10	H7	C9	240.8	237.7
O4	C10	H7	C11	115.3	115.4
H7	C10	C9	O3	179.0	304.1
C9	C10	H7	C11	234.5	237.8
H7	C10	C9	H5	299.2	64.1
H7	C10	C9	H6	58.9	184.2
H7	C10	C11	C12	122.6	94.9
H7	C10	C11	O6	359.9	336.3
H7	C10	C11	H8	238.3	213.6
C10	C11	H8	C12	247.7	245.4
C10	C11	H8	O6	122.0	122.7
H8	C11	C10	H7	238.3	213.6
C12	C11	H8	O6	234.2	237.3
H8	C11	C12	C13	218.1	241.3
H8	C11	C12	H9	333.7	0.1
H8	C11	O6	H18	300.7	302.7
O5	C12	H9	C11	234.3	237.4
O5	C12	H9	C13	123.9	122.7
H9	C12	O5	H4	303.4	61.2
H9	C12	C11	O6	210.0	237.4
C11	C12	H9	C13	249.6	245.3
H9	C12	C11	H8	333.7	0.1
H9	C12	C13	N	41.7	24.1
H9	C12	C13	H10	164.7	146.5
O4	C13	H10	C12	245.2	244.6
O4	C13	H10	N	119.4	122.3
C12	C13	H10	N	234.2	237.7
H10	C13	C12	H9	164.7	146.5
H10	C13	N	C14	176.9	145.9
H10	C13	N	C16	355.9	325.8
N	C14	H11	N1	180.0	180.4
H11	C14	N	C16	178.6	179.7
H11	C14	N1	C15	181.7	180.3
C3	C4	H12	C5	180.0	180.1
H12	C4	C3	H3	4.6	360.0
H12	C4	C5	C6	175.6	179.8
H13	C6	C7	S	359.0	360.0
C7	C6	H13	C5	180.0	180.0
H15	C	C1	H1	59.1	300.1
H15	C	C1	H2	300.9	180.0
C1	C	H15	H16	120.0	120.0
C1	C	H15	H17	240.0	240.0
H16	C	H15	H17	120.0	120.0
H16	C	C1	H1	179.1	60.0
H16	C	C1	H2	60.9	300.0
C1	C	H16	H15	240.0	240.0
C1	C	H16	H17	120.0	120.0
H15	C	H16	H17	240.0	240.0
H17	C	C1	H1	299.1	180.1
H17	C	C1	H2	180.9	60.0
C1	C	H17	H15	120.0	120.0
C1	C	H17	H16	240.0	240.0
H15	C	H17	H16	120.0	120.0
H18	O6	C11	H8	300.7	302.7
N2	C17	H19	N3	180.0	180.0
H19	C17	N3	C18	179.5	180.0
C18	N4	H20	H21	120.0	180.0
C18	N4	H21	H20	240.0	180.0