PDB Chemical Component 9H9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9H9

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C30 C01 1.532 1.528
C30 C29 1.507 1.534
C01 C02 1.488 1.505
C29 C28 1.542 1.528
O04 C03 1.224 1.219
C02 C03 1.456 1.411
C02 C27 1.360 1.357
C03 N05 1.440 1.348
C28 C27 1.529 1.506
C27 N26 1.379 1.339
N05 C06 1.388 1.361
N26 C06 1.318 1.315
C06 N07 1.367 1.369
N07 C08 1.461 1.470
N07 C25 1.479 1.469
C08 C09 1.508 1.533
C25 C24 1.538 1.533
C09 C10 1.518 1.524
C24 C10 1.510 1.523
C10 C23 1.549 1.540
C10 C11 1.466 1.510
C23 N19 1.489 1.480
F13 C12 1.293 1.350
C11 C12 1.393 1.382
C11 C18 1.406 1.391
C12 C14 1.427 1.385
N19 C18 1.396 1.401
N19 C20 1.494 1.469
C18 C17 1.399 1.394
O22 C21 1.403 1.429
C20 C21 1.560 1.529
C14 C15 1.398 1.384
C17 C15 1.417 1.381
C15 F16 1.306 1.351
C14 H1 1.080 1.080
C01 H2 1.100 1.091
C01 H3 1.100 1.090
C08 H4 1.099 1.090
C08 H5 1.100 1.089
C09 H6 1.099 1.091
C09 H7 1.100 1.090
C17 H8 1.080 1.080
C20 H9 1.100 1.090
C20 H10 1.100 1.091
C21 H11 1.100 1.090
C21 H12 1.100 1.091
C23 H13 1.100 1.091
C23 H14 1.100 1.090
C24 H15 1.100 1.089
C24 H16 1.100 1.090
C25 H17 1.100 1.090
C25 H18 1.100 1.090
C28 H19 1.100 1.090
C28 H20 1.100 1.090
C29 H21 1.100 1.089
C29 H22 1.100 1.090
C30 H23 1.100 1.091
C30 H24 1.100 1.090
N05 H25 1.000 0.970
O22 H26 0.950 0.967

Bond Angles for 9H9

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C30 C01 H2 109.3 109.3
C30 C01 H3 109.3 109.2
C30 C29 H21 109.3 109.7
C30 C29 H22 109.3 109.8
C01 C02 C03 118.1 118.1
C01 C02 C27 124.3 123.0
C02 C01 H2 109.3 109.2
C02 C01 H3 109.3 109.3
C29 C28 H19 108.4 109.3
C29 C28 H20 108.4 109.3
C03 C02 C27 117.5 118.9
C02 C03 N05 117.0 119.1
C02 C27 N26 123.2 119.6
C03 N05 C06 120.4 119.5
C03 N05 H25 119.8 120.3
C28 C27 N26 116.7 117.7
N05 C06 N07 120.4 119.5
C06 N07 C08 121.8 120.5
C06 N07 C25 123.3 120.7
N07 C08 H4 107.1 109.6
N07 C08 H5 107.1 109.8
N07 C25 H17 108.4 109.6
N07 C25 H18 108.4 109.7
C09 C08 H4 107.1 109.6
C09 C08 H5 107.1 109.5
C08 C09 H6 107.4 109.5
C08 C09 H7 107.4 109.5
C25 C24 H15 108.0 109.5
C25 C24 H16 107.9 109.5
C09 C10 C23 110.4 110.2
C11 C10 C23 102.3 103.5
C10 C23 N19 106.3 102.5
C10 C23 H13 110.3 110.8
C10 C23 H14 110.2 110.8
C10 C11 C12 127.6 131.9
C10 C11 C18 111.9 107.7
N19 C23 H13 110.3 110.8
N19 C23 H14 110.3 110.8
C12 C11 C18 120.5 120.4
C11 C12 C14 120.8 120.1
C11 C18 C17 119.6 119.2
C12 C14 C15 118.2 119.9
C12 C14 H1 120.9 120.0
N19 C20 H9 108.4 109.5
N19 C20 H10 108.4 109.5
C18 C17 H8 120.0 119.8
O22 C21 H11 109.8 109.5
O22 C21 H12 109.8 109.5
C21 C20 H9 108.4 109.5
C21 C20 H10 108.4 109.4
C20 C21 H11 109.8 109.5
C20 C21 H12 109.8 109.4
C14 C15 F16 118.6 119.9
C15 C14 H1 120.9 120.1
C17 C15 F16 120.5 119.9
H2 C01 H3 109.5 109.3
H4 C08 H5 109.5 109.6
H6 C09 H7 109.5 109.5
H9 C20 H10 109.5 109.4
H11 C21 H12 109.5 109.4
H13 C23 H14 109.5 110.9
H15 C24 H16 109.5 109.5
H17 C25 H18 109.5 109.6
H19 C28 H20 109.5 109.2
H21 C29 H22 109.4 109.7
H23 C30 H24 109.4 109.7

Torsion Angles for 9H9

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C02 C01 C30 H2 239.9 120.2
C02 C01 C30 H3 120.1 239.7
H2 C01 C30 H3 240.2 119.5
C29 C30 C01 H2 175.8 290.4
C29 C30 C01 H3 295.6 170.9
C30 C29 C28 H19 160.0 290.7
C30 C29 C28 H20 278.8 171.3
H21 C29 C30 H22 240.3 120.7
C30 C01 C02 H2 120.1 239.7
C30 C01 C02 H3 239.9 120.3
C03 C02 C01 C27 178.3 180.0
C01 C02 C03 N05 180.4 179.6
C01 C02 C27 N26 178.9 180.6
H2 C01 C02 H3 119.8 240.5
C29 C28 C27 N26 173.0 162.4
H19 C28 C29 H20 241.3 119.4
O04 C03 N05 H25 0.1 0.1
C01 C02 C03 C27 181.5 180.0
C03 C02 C01 H2 35.5 282.6
C03 C02 C01 H3 275.7 42.0
C03 C02 C27 N26 0.6 0.6
C02 C03 N05 C06 1.5 0.0
C02 C03 N05 H25 181.5 180.0
C01 C02 C27 C03 178.4 180.0
C27 C02 C01 H2 217.1 102.6
C27 C02 C01 H3 97.3 222.1
C27 C02 C03 N05 358.9 359.6
C28 C27 C02 N26 178.7 180.4
N05 C03 C02 C27 358.9 359.6
C03 N05 C06 N07 180.9 180.2
C02 C27 C28 N26 181.3 179.6
C03 N05 C06 H25 180.0 180.0
N05 C06 N07 C08 353.9 174.4
N05 C06 N07 C25 180.6 354.5
C02 C27 N26 C06 359.8 359.7
C06 N07 C08 H4 272.4 6.1
C06 N07 C08 H5 29.8 245.6
C06 N07 C25 H17 336.7 114.4
C06 N07 C25 H18 95.4 354.0
C06 N07 C08 C25 186.1 180.1
C09 C08 N07 H4 238.7 119.7
C09 C08 N07 H5 121.3 240.2
N07 C08 C09 H6 157.0 293.7
N07 C08 C09 H7 274.6 173.7
H4 C08 N07 H5 242.6 120.4
C06 N07 C25 C08 173.8 179.9
C25 N07 C08 H4 86.3 186.0
C25 N07 C08 H5 203.6 65.5
N07 C25 C24 H15 68.5 186.4
N07 C25 C24 H16 186.8 66.4
H17 C25 N07 H18 241.2 120.4
C06 N07 C08 C09 151.1 125.8
N07 C08 C09 H4 121.3 240.3
N07 C08 C09 H5 238.7 120.0
C08 C09 C10 C23 75.0 62.9
H4 C08 C09 H5 117.4 239.7
H6 C09 C08 H7 242.4 120.0
C06 N07 C25 C24 216.1 234.2
H15 C24 C25 H16 241.7 120.0
C11 C10 C09 C23 115.6 113.9
C09 C10 C23 N19 134.7 93.3
C09 C10 C23 H13 254.2 211.5
C09 C10 C23 H14 15.2 335.0
C09 C10 C11 C18 233.0 257.6
C24 C10 C23 N19 252.6 216.4
C24 C10 C23 H13 12.1 334.6
C24 C10 C23 H14 133.1 98.1
C23 C10 C11 C12 173.1 195.7
C23 C10 C11 C18 353.0 15.6
N19 C23 C10 H13 240.5 241.8
N19 C23 C10 H14 119.5 118.3
H13 C23 C10 H14 239.0 236.5
C09 C10 C11 C23 239.9 241.9
C11 C10 C23 N19 10.9 334.9
C11 C10 C23 H13 130.5 93.1
C11 C10 C23 H14 251.4 216.6
C12 C11 C10 C18 180.1 180.1
C10 C11 C12 C14 180.1 179.6
C10 C11 C18 C17 179.7 180.5
C10 C23 N19 H13 119.5 118.2
C10 C23 N19 H14 240.5 241.7
C23 N19 C20 H9 210.5 69.9
C23 N19 C20 H10 329.2 310.0
H13 C23 N19 H14 121.0 123.5
F13 C12 C14 H1 360.0 0.0
C12 C11 C10 C23 173.1 195.7
C10 C11 C12 C18 179.9 179.9
C12 C11 C18 C17 359.6 0.4
C11 C12 C14 C15 359.9 0.0
C11 C12 C14 H1 179.9 180.1
C18 C11 C10 C23 353.0 15.6
C10 C11 C18 C12 180.1 180.1
C18 C11 C12 C14 0.2 359.7
C11 C18 C17 H8 180.4 179.8
C14 C12 C11 C18 0.2 359.7
C12 C14 C15 F16 179.8 180.1
C15 C14 C12 H1 180.0 180.0
C10 C23 N19 C18 348.4 26.8
N19 C18 C17 H8 0.1 359.3
C10 C23 N19 C20 178.5 265.0
C21 C20 N19 H9 239.4 120.1
C21 C20 N19 H10 120.6 240.0
N19 C20 C21 H11 236.5 185.0
N19 C20 C21 H12 116.1 305.0
H9 C20 N19 H10 241.3 120.0
C18 C17 C15 F16 180.0 180.0
O22 C21 C20 H9 235.7 185.0
O22 C21 C20 H10 117.0 305.0
C20 C21 O22 H11 240.2 120.1
C20 C21 O22 H12 119.8 240.0
H11 C21 O22 H12 239.6 119.9
N19 C20 C21 H9 120.6 239.9
N19 C20 C21 H10 239.4 120.0
O22 C21 C20 H11 119.8 240.0
O22 C21 C20 H12 240.2 120.0
H9 C20 C21 H10 118.7 240.1
H11 C21 C20 H12 120.4 240.0
C12 C14 C15 H1 180.0 180.0
C17 C15 C14 F16 180.3 180.1
C11 C18 C17 C15 0.4 359.8
C14 C15 C17 F16 179.7 179.9
C17 C15 C14 H1 180.1 180.2
F16 C15 C14 H1 359.8 0.1
C12 C14 H1 C15 180.0 180.0
H1 C14 C15 F16 359.8 0.1
C30 C01 H2 H3 119.7 240.5
H2 C01 C02 C03 35.5 282.6
H2 C01 C02 C27 217.1 102.6
C02 C01 H2 H3 240.3 119.5
C30 C01 H3 H2 240.3 119.5
H3 C01 C02 C03 275.7 42.0
H3 C01 C02 C27 97.3 222.1
C02 C01 H3 H2 119.7 240.6
N07 C08 H4 H5 115.8 239.4
C09 C08 H4 H5 244.2 120.2
H4 C08 C09 H6 35.7 53.5
H4 C08 C09 H7 153.3 293.4
N07 C08 H5 H4 244.2 120.4
C09 C08 H5 H4 115.8 239.7
H5 C08 C09 H6 278.3 173.8
H5 C08 C09 H7 35.9 53.7
H6 C09 C08 H4 35.7 53.5
H6 C09 C08 H5 278.3 173.8
C08 C09 H6 H7 116.2 239.9
H6 C09 C10 C23 313.8 182.9
H7 C09 C08 H4 153.3 293.4
H7 C09 C08 H5 35.9 53.7
C08 C09 H7 H6 243.7 120.1
H7 C09 C10 C23 196.2 302.9
H8 C17 C15 F16 360.0 0.0
N19 C20 H9 H10 118.1 240.0
C21 C20 H9 H10 242.0 119.9
H9 C20 C21 H11 115.9 305.1
H9 C20 C21 H12 355.5 65.0
N19 C20 H10 H9 242.0 120.0
C21 C20 H10 H9 118.0 240.0
H10 C20 C21 H11 357.2 65.0
H10 C20 C21 H12 236.8 185.0
O22 C21 H11 H12 120.5 240.0
H11 C21 C20 H9 115.9 305.1
H11 C21 C20 H10 357.2 65.0
C20 C21 H11 H12 239.4 120.0
O22 C21 H12 H11 239.5 119.9
H12 C21 C20 H9 355.5 65.0
H12 C21 C20 H10 236.8 185.0
C20 C21 H12 H11 120.6 240.0
C10 C23 H13 N19 242.9 246.9
C10 C23 H13 H14 121.5 123.5
N19 C23 H13 H14 238.5 236.6
C10 C23 H14 N19 117.0 113.1
C10 C23 H14 H13 238.5 236.5
N19 C23 H14 H13 121.5 123.4
C25 C24 H15 H16 117.3 240.0
C25 C24 H16 H15 242.7 120.0
N07 C25 H17 H18 118.1 239.6
H17 C25 C24 H15 307.9 306.2
H17 C25 C24 H16 66.1 186.2
N07 C25 H18 H17 241.9 120.4
H18 C25 C24 H15 189.1 66.5
H18 C25 C24 H16 307.4 306.5
C29 C28 H19 H20 118.0 240.5
H19 C28 C27 N26 52.3 282.7
C29 C28 H20 H19 242.0 119.5
H20 C28 C27 N26 293.6 42.1
C30 C29 H21 H22 119.6 239.3
H21 C29 C28 H19 39.9 50.4
H21 C29 C28 H20 158.6 291.0
C30 C29 H22 H21 240.4 120.6
H22 C29 C28 H19 280.2 171.0
H22 C29 C28 H20 38.9 51.5
H23 C30 C01 H2 295.6 50.1
H23 C30 C01 H3 55.5 290.6
H23 C30 C29 H21 295.4 51.4
H23 C30 C29 H22 55.1 290.7
H24 C30 C01 H2 55.9 170.7
H24 C30 C01 H3 175.7 51.2
H24 C30 C29 H21 175.1 290.8
H24 C30 C29 H22 294.8 170.2
C03 N05 H25 C06 180.0 180.0
H25 N05 C06 N07 0.9 0.2
H26 O22 C21 H11 299.8 60.0
H26 O22 C21 H12 60.2 300.1