PDB Chemical Component 9GK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9GK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C13 |
C14 |
1.392 |
1.382 |
| C13 |
C12 |
1.391 |
1.383 |
| C14 |
C15 |
1.394 |
1.383 |
| C12 |
C11 |
1.393 |
1.382 |
| C15 |
C10 |
1.397 |
1.383 |
| C11 |
C10 |
1.401 |
1.382 |
| C10 |
C09 |
1.504 |
1.507 |
| C09 |
C08 |
1.525 |
1.529 |
| O03 |
C07 |
1.274 |
1.216 |
| C08 |
O02 |
1.429 |
1.429 |
| O02 |
C02 |
1.374 |
1.361 |
| C01 |
C02 |
1.404 |
1.379 |
| C01 |
C06 |
1.410 |
1.400 |
| C07 |
C06 |
1.505 |
1.472 |
| C07 |
O04 |
1.268 |
1.348 |
| C02 |
C03 |
1.400 |
1.396 |
| C06 |
C05 |
1.394 |
1.403 |
| C03 |
N01 |
1.410 |
1.400 |
| C03 |
C04 |
1.409 |
1.387 |
| C05 |
C04 |
1.403 |
1.385 |
| C05 |
O01 |
1.373 |
1.358 |
| N01 |
C19 |
1.386 |
1.366 |
| N01 |
C16 |
1.376 |
1.366 |
| C04 |
I01 |
2.127 |
2.095 |
| C19 |
C18 |
1.376 |
1.348 |
| C16 |
C17 |
1.377 |
1.349 |
| C18 |
C17 |
1.412 |
1.409 |
| C13 |
H1 |
1.080 |
1.080 |
| C15 |
H2 |
1.080 |
1.080 |
| C17 |
H3 |
1.080 |
1.080 |
| C01 |
H4 |
1.080 |
1.080 |
| C08 |
H5 |
1.100 |
1.090 |
| C08 |
H6 |
1.100 |
1.090 |
| C09 |
H7 |
1.100 |
1.090 |
| C09 |
H8 |
1.100 |
1.090 |
| C11 |
H9 |
1.080 |
1.081 |
| C12 |
H10 |
1.080 |
1.080 |
| C14 |
H11 |
1.080 |
1.079 |
| C16 |
H12 |
1.080 |
1.080 |
| C18 |
H13 |
1.080 |
1.080 |
| C19 |
H14 |
1.080 |
1.079 |
| O01 |
H15 |
0.950 |
0.967 |
| O04 |
H16 |
0.950 |
0.967 |
Bond Angles for 9GK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
C13 |
C14 |
120.3 |
120.1 |
| C13 |
C14 |
C15 |
120.2 |
120.0 |
| C14 |
C13 |
H1 |
119.8 |
120.0 |
| C13 |
C14 |
H11 |
119.9 |
120.1 |
| C13 |
C12 |
C11 |
119.6 |
119.9 |
| C12 |
C13 |
H1 |
119.8 |
120.0 |
| C13 |
C12 |
H10 |
120.2 |
120.0 |
| C14 |
C15 |
H2 |
120.0 |
120.0 |
| C12 |
C11 |
H9 |
119.7 |
120.0 |
| C15 |
C10 |
C09 |
120.4 |
120.0 |
| C10 |
C09 |
C08 |
111.1 |
109.5 |
| C10 |
C09 |
H7 |
109.1 |
109.5 |
| C10 |
C09 |
H8 |
109.1 |
109.5 |
| C09 |
C08 |
O02 |
108.5 |
109.5 |
| C09 |
C08 |
H5 |
109.7 |
109.5 |
| C09 |
C08 |
H6 |
109.7 |
109.5 |
| O03 |
C07 |
O04 |
126.9 |
120.0 |
| O02 |
C08 |
H5 |
109.7 |
109.5 |
| O02 |
C08 |
H6 |
109.7 |
109.5 |
| C02 |
C01 |
C06 |
122.6 |
119.9 |
| C01 |
C02 |
C03 |
117.8 |
120.2 |
| C02 |
C01 |
H4 |
118.7 |
120.1 |
| C01 |
C06 |
C05 |
118.6 |
119.8 |
| C06 |
C01 |
H4 |
118.7 |
120.0 |
| C07 |
O04 |
H16 |
109.5 |
117.0 |
| C02 |
C03 |
N01 |
123.6 |
119.9 |
| C02 |
C03 |
C04 |
120.4 |
120.3 |
| C06 |
C05 |
O01 |
119.6 |
120.0 |
| C04 |
C03 |
N01 |
116.0 |
119.9 |
| C03 |
N01 |
C19 |
124.2 |
125.7 |
| C03 |
N01 |
C16 |
127.6 |
125.6 |
| C03 |
C04 |
I01 |
122.1 |
120.0 |
| C05 |
C04 |
I01 |
117.3 |
120.0 |
| C05 |
O01 |
H15 |
109.5 |
114.0 |
| N01 |
C19 |
H14 |
125.6 |
125.9 |
| N01 |
C16 |
H12 |
125.8 |
125.9 |
| C19 |
C18 |
H13 |
126.6 |
126.2 |
| C16 |
C17 |
H3 |
126.0 |
126.2 |
| C18 |
C17 |
H3 |
126.1 |
126.3 |
| H5 |
C08 |
H6 |
109.5 |
109.4 |
| H7 |
C09 |
H8 |
109.5 |
109.4 |
Torsion Angles for 9GK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C14 |
C13 |
C12 |
C11 |
0.5 |
359.8 |
| C12 |
C13 |
C14 |
H1 |
180.0 |
180.3 |
| C14 |
C13 |
C12 |
H10 |
180.5 |
180.0 |
| C13 |
C14 |
C15 |
H2 |
179.9 |
180.0 |
| C12 |
C13 |
C14 |
C15 |
359.9 |
0.3 |
| C14 |
C13 |
C12 |
H1 |
180.0 |
179.7 |
| C12 |
C13 |
C14 |
H11 |
179.8 |
180.0 |
| C13 |
C12 |
C11 |
H9 |
179.4 |
180.0 |
| C15 |
C14 |
C13 |
H1 |
179.9 |
180.0 |
| C13 |
C14 |
C15 |
H11 |
180.0 |
179.6 |
| C11 |
C12 |
C13 |
C14 |
0.5 |
359.8 |
| C11 |
C12 |
C13 |
H1 |
180.5 |
180.1 |
| C13 |
C12 |
C11 |
H10 |
180.0 |
180.2 |
| C15 |
C10 |
C09 |
C08 |
90.3 |
90.0 |
| C15 |
C10 |
C09 |
H7 |
210.5 |
210.0 |
| C15 |
C10 |
C09 |
H8 |
330.1 |
330.0 |
| C11 |
C10 |
C09 |
H7 |
30.7 |
30.3 |
| C11 |
C10 |
C09 |
H8 |
150.2 |
150.3 |
| C10 |
C09 |
C08 |
O02 |
190.9 |
180.0 |
| C10 |
C09 |
C08 |
H5 |
310.7 |
300.0 |
| C10 |
C09 |
C08 |
H6 |
71.0 |
60.0 |
| H7 |
C09 |
C10 |
H8 |
240.5 |
240.0 |
| C10 |
C09 |
C08 |
H7 |
120.2 |
120.0 |
| C10 |
C09 |
C08 |
H8 |
239.8 |
240.0 |
| O02 |
C08 |
C09 |
H5 |
240.2 |
240.0 |
| O02 |
C08 |
C09 |
H6 |
119.9 |
120.0 |
| H5 |
C08 |
C09 |
H6 |
239.7 |
240.0 |
| O03 |
C07 |
O04 |
H16 |
0.0 |
0.0 |
| C09 |
C08 |
O02 |
H5 |
119.9 |
120.0 |
| C09 |
C08 |
O02 |
H6 |
240.2 |
240.0 |
| H5 |
C08 |
O02 |
H6 |
120.3 |
120.0 |
| O02 |
C02 |
C01 |
H4 |
359.6 |
359.7 |
| C02 |
C01 |
C06 |
C05 |
0.2 |
360.0 |
| C06 |
C01 |
C02 |
H4 |
180.0 |
180.3 |
| C01 |
C02 |
C03 |
N01 |
180.8 |
179.9 |
| C01 |
C02 |
C03 |
C04 |
359.9 |
359.9 |
| C06 |
C01 |
C02 |
C03 |
360.0 |
0.1 |
| C02 |
C01 |
C06 |
H4 |
180.0 |
179.7 |
| C01 |
C06 |
C05 |
O01 |
180.0 |
180.0 |
| C07 |
C06 |
C01 |
H4 |
359.9 |
0.2 |
| C07 |
C06 |
C05 |
O01 |
0.4 |
0.1 |
| C03 |
C02 |
C01 |
C06 |
360.0 |
0.1 |
| C03 |
C02 |
C01 |
H4 |
180.0 |
179.8 |
| C04 |
C03 |
C02 |
N01 |
179.0 |
180.0 |
| C02 |
C03 |
N01 |
C19 |
102.1 |
115.0 |
| C02 |
C03 |
N01 |
C16 |
276.1 |
295.0 |
| C02 |
C03 |
C04 |
I01 |
179.4 |
180.0 |
| C05 |
C06 |
C01 |
H4 |
180.2 |
180.3 |
| C06 |
C05 |
C04 |
I01 |
180.8 |
180.0 |
| C06 |
C05 |
O01 |
H15 |
180.0 |
269.9 |
| C02 |
C03 |
N01 |
C04 |
179.1 |
180.0 |
| N01 |
C03 |
C04 |
I01 |
358.4 |
360.0 |
| C03 |
N01 |
C19 |
H14 |
356.9 |
0.2 |
| C03 |
N01 |
C16 |
H12 |
3.7 |
359.9 |
| C02 |
C03 |
C04 |
N01 |
180.9 |
180.0 |
| C04 |
C03 |
N01 |
C19 |
283.1 |
295.0 |
| C04 |
C03 |
N01 |
C16 |
97.1 |
115.0 |
| C05 |
C04 |
C03 |
I01 |
180.7 |
180.1 |
| C01 |
C06 |
C05 |
C04 |
359.7 |
0.0 |
| C05 |
C04 |
C03 |
N01 |
179.2 |
180.0 |
| C03 |
C04 |
C05 |
I01 |
179.3 |
179.9 |
| O01 |
C05 |
C04 |
I01 |
0.5 |
0.0 |
| C03 |
N01 |
C19 |
C16 |
175.0 |
180.0 |
| C19 |
N01 |
C16 |
H12 |
178.5 |
179.9 |
| N01 |
C19 |
C18 |
H13 |
178.4 |
180.2 |
| C03 |
N01 |
C16 |
C19 |
185.2 |
180.0 |
| N01 |
C16 |
C17 |
H3 |
180.4 |
180.1 |
| I01 |
C04 |
C03 |
N01 |
358.4 |
360.0 |
| C03 |
N01 |
C19 |
C18 |
176.9 |
180.0 |
| C19 |
C18 |
C17 |
H3 |
180.7 |
179.9 |
| C18 |
C17 |
C16 |
H3 |
180.0 |
180.2 |
| C16 |
C17 |
C18 |
H3 |
180.0 |
179.8 |
| C12 |
C13 |
H1 |
C14 |
180.0 |
179.7 |
| H1 |
C13 |
C14 |
C15 |
179.9 |
180.0 |
| H1 |
C13 |
C14 |
H11 |
359.9 |
359.7 |
| H1 |
C13 |
C12 |
C11 |
180.5 |
180.1 |
| H1 |
C13 |
C12 |
H10 |
0.5 |
0.3 |
| H2 |
C15 |
C10 |
C09 |
0.1 |
0.0 |
| C02 |
C01 |
H4 |
C06 |
180.0 |
180.3 |
| H4 |
C01 |
C02 |
C03 |
180.0 |
179.8 |
| H4 |
C01 |
C06 |
C05 |
180.2 |
180.3 |
| C09 |
C08 |
H5 |
O02 |
240.9 |
239.9 |
| C09 |
C08 |
H5 |
H6 |
120.4 |
120.0 |
| O02 |
C08 |
H5 |
H6 |
239.5 |
240.0 |
| C09 |
C08 |
H6 |
O02 |
119.1 |
120.0 |
| C09 |
C08 |
H6 |
H5 |
239.6 |
240.0 |
| O02 |
C08 |
H6 |
H5 |
120.4 |
120.0 |
| C10 |
C09 |
H7 |
C08 |
238.5 |
240.0 |
| C10 |
C09 |
H7 |
H8 |
119.3 |
120.0 |
| H7 |
C09 |
C08 |
O02 |
70.6 |
60.0 |
| H7 |
C09 |
C08 |
H5 |
190.5 |
180.0 |
| H7 |
C09 |
C08 |
H6 |
310.8 |
300.0 |
| C10 |
C09 |
H8 |
C08 |
121.5 |
120.0 |
| C10 |
C09 |
H8 |
H7 |
240.7 |
240.0 |
| H8 |
C09 |
C08 |
O02 |
311.1 |
300.0 |
| H8 |
C09 |
C08 |
H5 |
71.0 |
60.0 |
| H8 |
C09 |
C08 |
H6 |
191.3 |
180.0 |
| H10 |
C12 |
C13 |
C14 |
180.5 |
180.0 |
| C13 |
C12 |
H10 |
C11 |
180.0 |
179.8 |
| H10 |
C12 |
C13 |
H1 |
0.5 |
0.3 |
| H10 |
C12 |
C11 |
H9 |
359.4 |
359.8 |
| C13 |
C14 |
H11 |
C15 |
180.0 |
180.4 |
| H11 |
C14 |
C13 |
H1 |
359.9 |
359.7 |
| H11 |
C14 |
C15 |
H2 |
359.9 |
0.3 |
| H12 |
C16 |
C17 |
H3 |
0.5 |
0.0 |
| H13 |
C18 |
C17 |
H3 |
0.7 |
359.9 |
| H14 |
C19 |
C18 |
H13 |
358.4 |
360.0 |