PDB Chemical Component 9F9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9F9

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 O05 1.435 1.429
O05 C06 1.369 1.356
C06 C07 1.390 1.388
C06 C15 1.402 1.401
C07 C09 1.384 1.380
C09 C11 1.376 1.386
C11 C13 1.380 1.378
C13 C15 1.404 1.397
C15 C16 1.502 1.476
C16 O17 1.227 1.215
C16 N18 1.356 1.348
N18 C20 1.425 1.402
C20 C21 1.398 1.386
C20 C39 1.406 1.395
C21 C23 1.386 1.387
C23 N24 1.386 1.395
C23 C36 1.387 1.396
N24 C25 1.465 1.465
N24 C29 1.381 1.347
C29 O30 1.223 1.216
C29 N31 1.379 1.347
N31 C32 1.476 1.466
N31 C36 1.391 1.394
C36 C37 1.376 1.387
C37 C39 1.416 1.385
C39 N40 1.386 1.401
N40 C41 1.469 1.469
N40 C53 1.461 1.468
C41 C44 1.510 1.530
C44 C47 1.522 1.531
C47 C50 1.507 1.531
C50 C53 1.497 1.530
C01 H011 1.100 1.091
C01 H012 1.101 1.090
C01 H013 1.101 1.089
C07 H07 1.080 1.080
C09 H09 1.080 1.080
C11 H11 1.080 1.081
C13 H13 1.080 1.080
N18 H18 1.000 0.970
C21 H21 1.080 1.081
C25 H251 1.100 1.090
C25 H252 1.100 1.090
C25 H253 1.100 1.090
C32 H321 1.100 1.090
C32 H322 1.100 1.090
C32 H323 1.100 1.090
C37 H37 1.079 1.079
C41 H411 1.100 1.090
C41 H412 1.100 1.091
C53 H531 1.100 1.090
C53 H532 1.100 1.090
C44 H441 1.100 1.090
C44 H442 1.099 1.090
C47 H471 1.100 1.089
C47 H472 1.100 1.090
C50 H501 1.100 1.090
C50 H502 1.100 1.089

Bond Angles for 9F9

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 O05 C06 117.2 117.0
O05 C01 H011 109.5 109.5
O05 C01 H012 109.4 109.5
O05 C01 H013 109.5 109.5
O05 C06 C07 122.1 120.2
O05 C06 C15 116.7 120.2
C07 C06 C15 121.1 119.7
C06 C07 C09 119.4 120.1
C06 C07 H07 120.3 119.9
C06 C15 C13 117.9 119.6
C06 C15 C16 127.8 120.1
C07 C09 C11 120.4 120.4
C09 C07 H07 120.3 120.0
C07 C09 H09 119.8 119.8
C09 C11 C13 120.6 120.3
C11 C09 H09 119.8 119.8
C09 C11 H11 119.7 119.8
C11 C13 C15 120.5 119.9
C13 C11 H11 119.7 119.8
C11 C13 H13 119.7 120.1
C13 C15 C16 114.2 120.2
C15 C13 H13 119.7 120.0
C15 C16 O17 121.2 120.0
C15 C16 N18 116.5 120.0
O17 C16 N18 122.3 120.0
C16 N18 C20 130.2 120.0
C16 N18 H18 114.9 120.0
N18 C20 C21 120.0 120.0
N18 C20 C39 116.5 120.0
C20 N18 H18 114.9 120.0
C21 C20 C39 123.4 120.0
C20 C21 C23 118.9 119.9
C20 C21 H21 120.6 120.0
C20 C39 C37 114.7 120.1
C20 C39 N40 123.2 119.9
C21 C23 N24 132.5 133.1
C21 C23 C36 120.0 120.0
C23 C21 H21 120.5 120.1
N24 C23 C36 107.5 106.8
C23 N24 C25 126.3 125.8
C23 N24 C29 109.5 108.3
C23 C36 N31 107.0 106.8
C23 C36 C37 120.1 120.0
C25 N24 C29 124.2 125.8
N24 C25 H251 109.5 109.5
N24 C25 H252 109.5 109.4
N24 C25 H253 109.5 109.5
N24 C29 O30 126.6 125.2
N24 C29 N31 106.4 109.7
O30 C29 N31 127.0 125.2
C29 N31 C32 123.9 125.8
C29 N31 C36 109.6 108.4
C32 N31 C36 126.5 125.8
N31 C32 H321 109.5 109.4
N31 C32 H322 109.5 109.4
N31 C32 H323 109.5 109.5
N31 C36 C37 132.9 133.2
C36 C37 C39 122.9 119.9
C36 C37 H37 118.5 120.0
C37 C39 N40 122.0 119.9
C39 C37 H37 118.6 120.1
C39 N40 C41 113.0 111.0
C39 N40 C53 120.2 111.1
C41 N40 C53 114.9 111.1
N40 C41 C44 112.7 109.6
N40 C41 H411 108.7 109.5
N40 C41 H412 108.7 109.4
N40 C53 C50 109.9 109.6
N40 C53 H531 109.4 109.4
N40 C53 H532 109.4 109.4
C41 C44 C47 110.5 109.3
C44 C41 H411 108.7 109.5
C44 C41 H412 108.6 109.5
C41 C44 H441 109.2 109.6
C41 C44 H442 109.2 109.5
C44 C47 C50 110.7 109.2
C47 C44 H441 109.2 109.5
C47 C44 H442 109.2 109.5
C44 C47 H471 109.1 109.6
C44 C47 H472 109.1 109.6
C47 C50 C53 110.8 109.3
C50 C47 H471 109.2 109.5
C50 C47 H472 109.1 109.5
C47 C50 H501 109.2 109.5
C47 C50 H502 109.2 109.5
C50 C53 H531 109.4 109.5
C50 C53 H532 109.3 109.5
C53 C50 H501 109.1 109.5
C53 C50 H502 109.1 109.5
H011 C01 H012 109.5 109.4
H011 C01 H013 109.4 109.5
H012 C01 H013 109.5 109.4
H251 C25 H252 109.5 109.4
H251 C25 H253 109.4 109.6
H252 C25 H253 109.5 109.4
H321 C32 H322 109.5 109.5
H321 C32 H323 109.5 109.5
H322 C32 H323 109.4 109.5
H411 C41 H412 109.5 109.4
H531 C53 H532 109.5 109.4
H441 C44 H442 109.5 109.5
H471 C47 H472 109.5 109.6
H501 C50 H502 109.5 109.5

Torsion Angles for 9F9

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C01 O05 C06 C07 6.0 360.0
C01 O05 C06 C15 188.0 179.7
H011 C01 O05 H012 240.0 240.0
H011 C01 O05 H013 120.0 120.0
H012 C01 O05 H013 240.0 240.0
C06 O05 C01 H011 180.0 60.0
C06 O05 C01 H012 300.0 180.0
C06 O05 C01 H013 60.0 300.0
C07 C06 O05 C15 178.0 180.2
O05 C06 C07 C09 179.7 180.0
O05 C06 C07 H07 359.7 0.0
O05 C06 C15 C13 181.0 179.7
O05 C06 C15 C16 356.5 360.0
O05 C06 C07 C15 182.0 179.8
C07 C06 C15 C13 2.9 359.4
C07 C06 C15 C16 178.4 179.7
C06 C07 C09 C11 1.3 0.1
C09 C07 C06 H07 180.0 180.0
C06 C07 C09 H09 181.3 180.0
O05 C06 C15 C07 178.1 180.2
C15 C06 C07 C09 357.6 0.2
C15 C06 C07 H07 177.6 180.3
C11 C13 C15 C06 357.5 0.6
C13 C15 C06 C16 184.5 179.7
C06 C15 C13 H13 177.5 180.3
C06 C15 C16 O17 174.8 0.0
C06 C15 C16 N18 351.6 180.0
C09 C07 C06 C15 357.6 0.2
C06 C07 C09 H07 180.0 180.0
C07 C09 C11 C13 359.2 360.0
C11 C09 C07 H09 180.0 180.1
C07 C09 C11 H11 179.1 180.0
C11 C09 C07 H07 181.3 180.0
C07 C09 C11 H09 180.0 179.9
C09 C11 C13 C15 1.5 359.7
C13 C11 C09 H11 180.0 180.0
C09 C11 C13 H13 181.5 180.0
C06 C15 C13 C11 357.5 0.6
C13 C11 C09 H09 179.2 180.0
C09 C11 C13 H11 180.0 180.0
C11 C13 C15 C16 181.4 180.3
C15 C13 C11 H13 180.0 179.7
C06 C15 C13 C16 176.1 180.3
C15 C13 C11 H11 181.5 179.7
C11 C13 C15 H13 180.0 180.3
C13 C15 C16 O17 350.5 180.3
C13 C15 C16 N18 167.3 0.3
C06 C15 C16 C13 184.4 179.7
C16 C15 C13 H13 1.4 360.0
O17 C16 C15 N18 183.2 180.0
C15 C16 N18 C20 186.1 175.5
C15 C16 N18 H18 6.1 355.5
C15 C16 O17 N18 176.6 180.0
O17 C16 N18 C20 2.9 355.4
O17 C16 N18 H18 182.9 175.5
C15 C16 N18 O17 183.2 180.0
C16 N18 C20 C21 340.4 34.7
C16 N18 C20 C39 156.2 214.4
C20 N18 C16 H18 180.0 180.0
C16 N18 C20 H18 180.0 180.0
C21 C20 N18 C39 184.2 180.3
N18 C20 C21 C23 177.2 180.0
N18 C20 C21 H21 357.2 360.0
N18 C20 C39 C37 182.2 179.7
N18 C20 C39 N40 0.6 0.0
N18 C20 C21 C39 175.5 179.7
C21 C20 N18 H18 160.4 214.7
C21 C20 C39 C37 357.8 359.4
C21 C20 C39 N40 176.2 179.7
C20 C21 C23 N24 178.9 180.0
C20 C21 C23 C36 359.2 360.0
C23 C21 C20 H21 180.0 180.0
N18 C20 C39 C21 184.4 180.3
C39 C20 N18 H18 336.2 34.4
C39 C20 C21 C23 1.8 0.3
C39 C20 C21 H21 181.8 180.3
C36 C37 C39 C20 1.7 0.6
C37 C39 C20 N40 181.6 179.7
C20 C39 C37 H37 181.8 180.3
C20 C39 N40 C41 284.1 240.0
C20 C39 N40 C53 143.2 115.8
C23 C21 C20 C39 1.8 0.3
C20 C21 C23 H21 180.0 180.0
N24 C23 C21 C36 179.6 180.0
C21 C23 N24 C25 0.4 0.1
C21 C23 N24 C29 179.9 180.0
C21 C23 C36 N31 180.1 180.0
C21 C23 C36 C37 0.4 0.0
C21 C23 N24 C36 180.3 180.0
N24 C23 C21 H21 358.9 360.0
N24 C23 C36 N31 0.4 360.0
N24 C23 C36 C37 180.6 180.0
C25 N24 C23 C29 180.5 180.0
C23 N24 C25 H251 180.0 90.1
C23 N24 C25 H252 300.0 210.0
C23 N24 C25 H253 60.0 329.9
C23 N24 C29 O30 180.3 180.1
C23 N24 C29 N31 0.4 359.9
C21 C23 C36 N24 179.7 180.0
C36 C23 C21 H21 179.2 180.0
C36 C23 N24 C25 180.0 180.1
C36 C23 N24 C29 359.5 0.1
C29 N31 C36 C23 359.9 0.0
C32 N31 C36 C23 179.4 180.0
N31 C36 C23 C37 179.7 179.9
C23 C36 C37 C39 359.1 359.7
C23 C36 C37 H37 179.1 180.0
C25 N24 C23 C36 180.0 180.1
C23 N24 C25 C29 179.4 180.0
C25 N24 C29 O30 359.8 0.1
C25 N24 C29 N31 179.9 179.9
H251 C25 N24 H252 240.0 240.1
H251 C25 N24 H253 120.0 120.1
H252 C25 N24 H253 240.0 240.1
C29 N24 C23 C36 359.5 0.1
C23 N24 C29 C25 180.5 180.0
C29 N24 C25 H251 0.6 270.1
C29 N24 C25 H252 120.6 30.0
C29 N24 C25 H253 240.6 150.0
O30 C29 N24 N31 179.9 180.1
N24 C29 N31 C32 180.3 180.0
N24 C29 N31 C36 359.8 0.0
N24 C29 O30 N31 180.1 179.9
O30 C29 N31 C32 0.3 359.9
O30 C29 N31 C36 179.9 179.9
C23 C36 N31 C29 359.9 0.0
N24 C29 N31 O30 179.9 180.1
C32 N31 C29 C36 180.4 180.0
C29 N31 C32 H321 180.0 360.0
C29 N31 C32 H322 300.0 119.9
C29 N31 C32 H323 60.0 240.0
C29 N31 C36 C37 179.5 179.9
C23 C36 N31 C32 179.4 180.0
C29 N31 C32 C36 179.5 180.0
C32 N31 C36 C37 359.1 359.9
H321 C32 N31 H322 240.0 240.0
H321 C32 N31 H323 120.0 120.0
H322 C32 N31 H323 240.0 240.0
C23 C36 N31 C37 180.3 180.1
C29 N31 C36 C32 180.4 180.0
C36 N31 C32 H321 0.5 180.0
C36 N31 C32 H322 120.5 300.0
C36 N31 C32 H323 240.5 60.0
N31 C36 C37 C39 179.5 179.8
N31 C36 C37 H37 359.4 0.1
C20 C39 C37 C36 1.7 0.6
C23 C36 C37 N31 179.6 179.9
C36 C37 C39 N40 183.3 180.3
C39 C37 C36 H37 180.0 179.7
C20 C39 C37 N40 178.4 180.3
C36 C37 C39 H37 180.0 180.3
C37 C39 N40 C41 102.4 60.3
C37 C39 N40 C53 321.5 296.1
C20 C39 N40 C37 181.7 179.7
N40 C39 C37 H37 3.3 359.9
C41 N40 C39 C53 140.9 124.2
C39 N40 C41 C44 165.1 174.1
C39 N40 C41 H411 285.6 294.2
C39 N40 C41 H412 44.6 54.1
C39 N40 C53 C50 195.1 185.8
C39 N40 C53 H531 315.1 305.9
C39 N40 C53 H532 75.0 65.7
C39 N40 C41 C53 216.9 235.9
C41 N40 C53 C50 54.8 61.7
C41 N40 C53 H531 174.9 181.8
C41 N40 C53 H532 294.8 301.6
N40 C41 C44 C47 49.7 59.2
C44 C41 N40 H411 239.5 239.9
C44 C41 N40 H412 120.5 120.0
N40 C41 C44 H441 169.9 179.1
N40 C41 C44 H442 289.6 299.3
H411 C41 N40 H412 241.0 240.1
C39 N40 C53 C41 140.2 124.1
C53 N40 C41 C44 308.2 298.3
C53 N40 C41 H411 68.7 58.4
C53 N40 C41 H412 187.7 178.2
C47 C50 C53 N40 302.5 300.8
C50 C53 N40 H531 239.9 239.9
C50 C53 N40 H532 120.0 120.1
N40 C53 C50 H501 182.4 180.9
N40 C53 C50 H502 62.8 60.8
H531 C53 N40 H532 240.1 240.1
C44 C41 N40 C53 308.2 298.3
N40 C41 C44 H411 120.5 120.1
N40 C41 C44 H412 239.5 240.0
C41 C44 C47 C50 306.5 302.3
C47 C44 C41 H441 239.8 240.1
C47 C44 C41 H442 120.2 119.9
C41 C44 C47 H471 66.7 62.2
C41 C44 C47 H472 186.3 182.5
H411 C41 C44 H412 119.0 119.9
H441 C44 C41 H442 240.3 239.8
C47 C44 C41 H411 289.2 299.1
C47 C44 C41 H412 170.2 179.2
C41 C44 C47 H441 120.2 120.0
C41 C44 C47 H442 239.8 240.1
C44 C47 C50 C53 58.1 57.7
C50 C47 C44 H471 239.8 240.1
C50 C47 C44 H472 120.2 119.9
C44 C47 C50 H501 178.3 177.6
C44 C47 C50 H502 298.0 297.8
H441 C44 C47 H442 119.7 120.1
H471 C47 C44 H472 240.4 239.8
N40 C53 C50 C47 302.5 300.8
C50 C47 C44 H441 186.3 182.4
C50 C47 C44 H442 66.7 62.2
C44 C47 C50 H471 120.2 120.0
C44 C47 C50 H472 239.8 240.1
C47 C50 C53 H531 182.5 180.8
C47 C50 C53 H532 62.6 60.8
C53 C50 C47 H501 239.8 240.1
C53 C50 C47 H502 120.2 119.9
H471 C47 C50 H472 119.7 120.1
H501 C50 C47 H502 240.4 239.8
N40 C53 C50 H531 120.1 120.0
N40 C53 C50 H532 239.9 240.0
C53 C50 C47 H471 298.0 297.7
C53 C50 C47 H472 178.3 177.6
C47 C50 C53 H501 120.2 119.9
C47 C50 C53 H502 239.8 240.0
H531 C53 C50 H532 119.9 119.9
H501 C50 C53 H502 119.6 120.1
H011 C01 O05 C06 180.0 60.0
O05 C01 H011 H012 120.0 120.0
O05 C01 H011 H013 240.0 239.9
H012 C01 H011 H013 120.0 119.9
H012 C01 O05 C06 300.0 180.0
O05 C01 H012 H011 240.0 240.0
O05 C01 H012 H013 120.0 120.0
H011 C01 H012 H013 240.0 240.0
H013 C01 O05 C06 60.0 300.0
O05 C01 H013 H011 120.0 120.0
O05 C01 H013 H012 240.0 240.0
H011 C01 H013 H012 120.0 119.9
H07 C07 C06 C15 177.6 180.3
C06 C07 H07 C09 180.0 180.0
H07 C07 C09 C11 181.3 180.0
H07 C07 C09 H09 1.2 360.0
C07 C09 H09 C11 180.0 180.1
H09 C09 C07 H07 1.2 360.0
H09 C09 C11 C13 179.2 180.0
H09 C09 C11 H11 359.2 0.1
C09 C11 H11 C13 180.0 180.0
H11 C11 C09 H09 359.2 0.1
H11 C11 C13 C15 181.5 179.7
H11 C11 C13 H13 1.5 0.0
C11 C13 H13 C15 180.0 179.7
H13 C13 C11 H11 1.5 0.0
H13 C13 C15 C16 1.4 360.0
C16 N18 H18 C20 180.0 180.0
H18 N18 C20 C21 160.4 214.7
H18 N18 C20 C39 336.2 34.4
H21 C21 C20 C39 181.8 180.3
C20 C21 H21 C23 180.0 180.0
H21 C21 C23 N24 358.9 360.0
H21 C21 C23 C36 179.2 180.0
H251 C25 N24 C29 0.6 270.1
N24 C25 H251 H252 120.0 120.0
N24 C25 H251 H253 240.0 239.9
H252 C25 H251 H253 120.0 120.0
H252 C25 N24 C29 120.6 30.0
N24 C25 H252 H251 239.9 240.0
N24 C25 H252 H253 120.0 120.0
H251 C25 H252 H253 240.0 240.0
H253 C25 N24 C29 240.6 150.0
N24 C25 H253 H251 120.0 120.1
N24 C25 H253 H252 240.0 240.1
H251 C25 H253 H252 120.0 120.0
H321 C32 N31 C36 0.5 180.0
N31 C32 H321 H322 120.0 119.9
N31 C32 H321 H323 240.0 240.0
H322 C32 H321 H323 120.0 120.1
H322 C32 N31 C36 120.5 300.0
N31 C32 H322 H321 240.0 240.1
N31 C32 H322 H323 120.0 120.0
H321 C32 H322 H323 240.0 239.9
H323 C32 N31 C36 240.5 60.0
N31 C32 H323 H321 120.0 120.0
N31 C32 H323 H322 240.0 240.0
H321 C32 H323 H322 120.0 120.0
C36 C37 H37 C39 180.0 179.7
H37 C37 C39 N40 3.3 359.9
H411 C41 N40 C53 68.7 58.4
N40 C41 H411 C44 237.0 239.8
N40 C41 H411 H412 118.6 119.9
H411 C41 C44 C47 289.2 299.1
C44 C41 H411 H412 241.5 240.1
H411 C41 C44 H441 49.4 59.0
H411 C41 C44 H442 169.1 179.2
H412 C41 N40 C53 187.7 178.2
N40 C41 H412 C44 123.0 120.1
N40 C41 H412 H411 241.5 240.1
H412 C41 C44 C47 170.2 179.2
C44 C41 H412 H411 118.5 119.9
H412 C41 C44 H441 290.4 299.2
H412 C41 C44 H442 50.1 59.3
N40 C53 H531 C50 239.6 239.9
N40 C53 H531 H532 119.8 119.9
C50 C53 H531 H532 240.2 240.0
H531 C53 C50 H501 62.3 60.8
H531 C53 C50 H502 302.7 300.7
N40 C53 H532 C50 120.4 120.1
N40 C53 H532 H531 240.2 240.1
C50 C53 H532 H531 119.8 120.0
H532 C53 C50 H501 302.4 300.9
H532 C53 C50 H502 182.8 180.8
C41 C44 H441 C47 239.0 240.2
H441 C44 C41 H411 49.4 59.0
H441 C44 C41 H412 290.4 299.2
C41 C44 H441 H442 119.5 120.1
H441 C44 C47 C50 186.3 182.4
C47 C44 H441 H442 240.5 239.9
H441 C44 C47 H471 306.5 302.3
H441 C44 C47 H472 66.2 62.5
C41 C44 H442 C47 121.0 119.8
H442 C44 C41 H411 169.1 179.2
H442 C44 C41 H412 50.1 59.3
C41 C44 H442 H441 240.5 239.8
H442 C44 C47 C50 66.7 62.2
C47 C44 H442 H441 119.5 120.1
H442 C44 C47 H471 186.9 182.2
H442 C44 C47 H472 306.5 302.4
C44 C47 H471 C50 238.8 240.3
H471 C47 C44 H441 306.5 302.3
H471 C47 C44 H442 186.9 182.2
C44 C47 H471 H472 119.4 120.2
H471 C47 C50 C53 298.0 297.7
C50 C47 H471 H472 240.6 239.9
H471 C47 C50 H501 58.1 57.6
H471 C47 C50 H502 177.8 177.8
C44 C47 H472 C50 121.1 119.7
H472 C47 C44 H441 66.2 62.5
H472 C47 C44 H442 306.5 302.4
C44 C47 H472 H471 240.6 239.8
H472 C47 C50 C53 178.3 177.6
C50 C47 H472 H471 119.5 120.1
H472 C47 C50 H501 298.5 297.5
H472 C47 C50 H502 58.1 57.7
C47 C50 H501 C53 238.8 240.2
H501 C50 C47 H471 58.1 57.6
H501 C50 C47 H472 298.5 297.5
C47 C50 H501 H502 119.4 120.2
H501 C50 C53 H531 62.3 60.8
H501 C50 C53 H532 302.4 300.9
C53 C50 H501 H502 240.6 239.9
C47 C50 H502 C53 121.2 119.8
H502 C50 C47 H471 177.8 177.8
H502 C50 C47 H472 58.1 57.7
C47 C50 H502 H501 240.6 239.8
H502 C50 C53 H531 302.7 300.7
H502 C50 C53 H532 182.8 180.8
C53 C50 H502 H501 119.4 120.1