PDB Chemical Component 9E5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9E5
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.514 |
1.507 |
| C11 |
C10 |
1.513 |
1.507 |
| C2 |
C10 |
1.403 |
1.378 |
| C2 |
C3 |
1.406 |
1.388 |
| C10 |
C9 |
1.394 |
1.390 |
| C3 |
C4 |
1.393 |
1.366 |
| C9 |
O8 |
1.323 |
1.347 |
| C9 |
C5 |
1.390 |
1.407 |
| O8 |
C7 |
1.361 |
1.349 |
| C4 |
C5 |
1.392 |
1.397 |
| C5 |
C6 |
1.401 |
1.462 |
| N14 |
C15 |
1.439 |
1.465 |
| N14 |
C12 |
1.333 |
1.348 |
| C7 |
C6 |
1.380 |
1.358 |
| C7 |
C12 |
1.467 |
1.470 |
| C15 |
C16 |
1.508 |
1.508 |
| C6 |
C26 |
1.505 |
1.508 |
| C12 |
O13 |
1.228 |
1.217 |
| C16 |
C17 |
1.380 |
1.382 |
| C16 |
C21 |
1.407 |
1.382 |
| C17 |
C18 |
1.387 |
1.382 |
| C21 |
C20 |
1.409 |
1.382 |
| C18 |
C19 |
1.412 |
1.382 |
| C20 |
C19 |
1.408 |
1.383 |
| C19 |
S22 |
1.692 |
1.762 |
| N25 |
S22 |
1.596 |
1.656 |
| O24 |
S22 |
1.446 |
1.421 |
| S22 |
O23 |
1.438 |
1.420 |
| C4 |
H1 |
1.080 |
1.079 |
| C11 |
H2 |
1.100 |
1.090 |
| C11 |
H3 |
1.100 |
1.090 |
| C11 |
H4 |
1.099 |
1.090 |
| C3 |
H5 |
1.080 |
1.081 |
| N25 |
H6 |
1.000 |
0.971 |
| N25 |
H7 |
1.000 |
0.969 |
| C18 |
H8 |
1.080 |
1.080 |
| C17 |
H9 |
1.081 |
1.080 |
| C20 |
H10 |
1.080 |
1.081 |
| C21 |
H11 |
1.080 |
1.081 |
| C15 |
H12 |
1.100 |
1.090 |
| C15 |
H13 |
1.100 |
1.090 |
| N14 |
H14 |
1.000 |
0.970 |
| C26 |
H15 |
1.100 |
1.090 |
| C26 |
H16 |
1.100 |
1.090 |
| C26 |
H17 |
1.100 |
1.090 |
| C1 |
H18 |
1.100 |
1.090 |
| C1 |
H19 |
1.100 |
1.089 |
| C1 |
H20 |
1.100 |
1.089 |
Bond Angles for 9E5
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C10 |
C9 |
119.9 |
120.1 |
| C10 |
C11 |
H2 |
109.5 |
109.5 |
| C10 |
C11 |
H3 |
109.5 |
109.5 |
| C10 |
C11 |
H4 |
109.5 |
109.5 |
| C2 |
C3 |
H5 |
119.2 |
119.8 |
| C10 |
C9 |
O8 |
125.1 |
133.3 |
| C3 |
C4 |
H1 |
121.0 |
120.2 |
| C4 |
C5 |
C6 |
134.4 |
134.2 |
| C5 |
C4 |
H1 |
121.0 |
120.1 |
| C5 |
C6 |
C26 |
122.2 |
126.9 |
| N14 |
C15 |
H12 |
107.8 |
109.5 |
| N14 |
C15 |
H13 |
107.8 |
109.5 |
| N14 |
C12 |
O13 |
123.5 |
120.0 |
| C7 |
C6 |
C26 |
132.4 |
127.0 |
| C7 |
C12 |
O13 |
118.8 |
120.0 |
| C6 |
C26 |
H15 |
109.5 |
109.4 |
| C6 |
C26 |
H16 |
109.5 |
109.5 |
| C6 |
C26 |
H17 |
109.5 |
109.5 |
| C16 |
C17 |
H9 |
119.6 |
120.0 |
| C16 |
C21 |
H11 |
119.4 |
120.0 |
| C17 |
C18 |
H8 |
118.3 |
120.0 |
| C21 |
C20 |
H10 |
119.3 |
120.0 |
| O24 |
S22 |
O23 |
117.3 |
123.2 |
| H2 |
C11 |
H3 |
109.4 |
109.5 |
| H2 |
C11 |
H4 |
109.5 |
109.4 |
| H3 |
C11 |
H4 |
109.5 |
109.4 |
| H6 |
N25 |
H7 |
109.5 |
120.0 |
| H12 |
C15 |
H13 |
109.5 |
109.5 |
| H15 |
C26 |
H16 |
109.5 |
109.5 |
| H15 |
C26 |
H17 |
109.5 |
109.5 |
| H16 |
C26 |
H17 |
109.5 |
109.5 |
| H18 |
C1 |
H19 |
109.5 |
109.4 |
| H18 |
C1 |
H20 |
109.5 |
109.5 |
| H19 |
C1 |
H20 |
109.5 |
109.6 |
Torsion Angles for 9E5
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
C3 |
H5 |
0.1 |
359.8 |
| C11 |
C10 |
C9 |
O8 |
359.5 |
-0.0 |
| H2 |
C11 |
C10 |
H3 |
240.0 |
240.0 |
| H2 |
C11 |
C10 |
H4 |
120.0 |
120.0 |
| H3 |
C11 |
C10 |
H4 |
240.0 |
240.0 |
| C2 |
C10 |
C11 |
H2 |
89.5 |
270.0 |
| C2 |
C10 |
C11 |
H3 |
209.5 |
30.0 |
| C2 |
C10 |
C11 |
H4 |
329.5 |
150.0 |
| C2 |
C3 |
C4 |
H1 |
179.9 |
179.8 |
| C9 |
C10 |
C11 |
H2 |
270.4 |
89.9 |
| C9 |
C10 |
C11 |
H3 |
30.4 |
210.0 |
| C9 |
C10 |
C11 |
H4 |
150.4 |
330.0 |
| C5 |
C4 |
C3 |
H1 |
180.0 |
179.7 |
| C9 |
C5 |
C4 |
H1 |
180.4 |
180.0 |
| C9 |
C5 |
C6 |
C26 |
180.3 |
180.0 |
| C3 |
C4 |
C5 |
H1 |
180.0 |
180.3 |
| C4 |
C5 |
C6 |
C26 |
0.7 |
360.0 |
| C6 |
C5 |
C4 |
H1 |
360.0 |
-0.0 |
| C7 |
C6 |
C5 |
C26 |
179.4 |
180.0 |
| C5 |
C6 |
C26 |
H15 |
89.7 |
90.0 |
| C5 |
C6 |
C26 |
H16 |
209.7 |
210.0 |
| C5 |
C6 |
C26 |
H17 |
329.7 |
330.0 |
| C15 |
N14 |
C12 |
O13 |
7.3 |
0.0 |
| H12 |
C15 |
N14 |
H13 |
241.9 |
120.0 |
| C7 |
C12 |
N14 |
O13 |
184.0 |
180.0 |
| C5 |
C6 |
C7 |
C26 |
180.7 |
180.0 |
| C7 |
C6 |
C26 |
H15 |
270.5 |
270.0 |
| C7 |
C6 |
C26 |
H16 |
30.5 |
30.0 |
| C7 |
C6 |
C26 |
H17 |
150.5 |
150.0 |
| N14 |
C12 |
C7 |
O13 |
176.2 |
180.0 |
| C12 |
C7 |
C6 |
C26 |
0.2 |
0.0 |
| C15 |
C16 |
C17 |
H9 |
358.2 |
0.0 |
| C15 |
C16 |
C21 |
H11 |
2.2 |
360.0 |
| H15 |
C26 |
C6 |
H16 |
240.0 |
240.0 |
| H15 |
C26 |
C6 |
H17 |
120.0 |
120.0 |
| H16 |
C26 |
C6 |
H17 |
240.0 |
240.0 |
| C16 |
C17 |
C18 |
H8 |
179.3 |
180.0 |
| C21 |
C16 |
C17 |
H9 |
179.7 |
179.7 |
| C16 |
C21 |
C20 |
H10 |
180.4 |
180.0 |
| H1 |
C4 |
C5 |
C6 |
360.0 |
360.0 |
| H2 |
C11 |
C10 |
C9 |
270.4 |
89.9 |
| C10 |
C11 |
H2 |
H3 |
120.0 |
120.1 |
| C10 |
C11 |
H2 |
H4 |
240.0 |
240.0 |
| H3 |
C11 |
H2 |
H4 |
120.0 |
120.0 |
| H3 |
C11 |
C10 |
C9 |
30.4 |
210.0 |
| C10 |
C11 |
H3 |
H2 |
240.0 |
240.0 |
| C10 |
C11 |
H3 |
H4 |
120.0 |
120.0 |
| H2 |
C11 |
H3 |
H4 |
240.0 |
240.0 |
| H4 |
C11 |
C10 |
C9 |
150.4 |
330.0 |
| C10 |
C11 |
H4 |
H2 |
120.0 |
120.0 |
| C10 |
C11 |
H4 |
H3 |
240.0 |
239.9 |
| H2 |
C11 |
H4 |
H3 |
119.9 |
120.0 |
| H5 |
C3 |
C4 |
H1 |
359.9 |
0.2 |
| H9 |
C17 |
C18 |
H8 |
359.2 |
0.0 |
| H11 |
C21 |
C20 |
H10 |
0.5 |
0.0 |
| N14 |
C15 |
H12 |
H13 |
117.0 |
240.0 |
| N14 |
C15 |
H13 |
H12 |
243.0 |
120.0 |
| H14 |
N14 |
C15 |
H12 |
192.3 |
240.0 |
| H14 |
N14 |
C15 |
H13 |
310.4 |
120.0 |
| H14 |
N14 |
C12 |
O13 |
187.3 |
180.0 |
| C6 |
C26 |
H15 |
H16 |
120.0 |
120.0 |
| C6 |
C26 |
H15 |
H17 |
240.0 |
240.0 |
| H16 |
C26 |
H15 |
H17 |
120.0 |
120.0 |
| C6 |
C26 |
H16 |
H15 |
240.0 |
240.0 |
| C6 |
C26 |
H16 |
H17 |
120.0 |
120.0 |
| H15 |
C26 |
H16 |
H17 |
240.0 |
240.0 |
| C6 |
C26 |
H17 |
H15 |
120.0 |
119.9 |
| C6 |
C26 |
H17 |
H16 |
240.0 |
240.0 |
| H15 |
C26 |
H17 |
H16 |
120.0 |
120.0 |
| H19 |
C1 |
H18 |
H20 |
120.0 |
120.1 |
| H18 |
C1 |
H19 |
H20 |
240.0 |
240.0 |
| H18 |
C1 |
H20 |
H19 |
120.0 |
120.0 |