PDB Chemical Component 9E2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9E2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O5 N5 1.221 1.218
N5 O4 1.224 1.218
N5 C4 1.469 1.480
N1 C4 1.305 1.308
N1 N2 1.403 1.401
C4 C3 1.405 1.399
N2 C5 1.460 1.465
N2 C2 1.341 1.351
C5 C6 1.515 1.506
C3 C2 1.348 1.354
C3 CL1 1.731 1.736
C2 C1 1.507 1.506
C6 N3 1.372 1.348
C6 O1 1.232 1.213
N3 C7 1.408 1.399
C7 C8 1.388 1.389
C7 C12 1.382 1.389
C8 C9 1.390 1.381
C12 C11 1.392 1.382
C9 C10 1.375 1.382
C11 C10 1.385 1.383
C10 S1 1.758 1.762
N4 S1 1.622 1.657
O3 S1 1.432 1.421
S1 O2 1.400 1.421
C11 H1 1.080 1.080
C5 H2 1.100 1.090
C5 H3 1.100 1.090
C9 H4 1.080 1.080
C8 H5 1.080 1.080
N4 H6 1.000 0.969
N4 H7 1.000 0.971
N3 H8 0.999 0.970
C1 H9 1.100 1.091
C1 H10 1.100 1.090
C1 H11 1.100 1.090
C12 H12 1.080 1.080

Bond Angles for 9E2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O5 N5 O4 121.5 120.0
C4 N1 N2 107.4 108.3
N1 C4 C3 108.5 108.2
N2 C5 H2 106.5 109.5
N2 C5 H3 106.5 109.5
N2 C2 C1 125.2 126.1
C5 C6 N3 119.7 120.0
C5 C6 O1 116.8 120.0
C6 C5 H2 106.5 109.5
C6 C5 H3 106.5 109.5
C3 C2 C1 127.1 126.2
C2 C1 H9 109.5 109.4
C2 C1 H10 109.5 109.5
C2 C1 H11 109.5 109.5
N3 C6 O1 122.8 120.0
C6 N3 H8 117.7 120.0
N3 C7 C12 122.3 120.1
C7 C8 H5 120.0 120.0
C7 C12 H12 119.8 120.0
C8 C9 C10 121.3 120.0
C8 C9 H4 119.4 120.0
C12 C11 C10 120.9 120.1
C12 C11 H1 119.6 120.0
C11 C10 C9 118.4 120.2
C9 C10 S1 118.7 119.9
C10 C9 H4 119.3 120.0
C11 C10 S1 122.8 119.9
C10 C11 H1 119.6 120.0
N4 S1 C10 107.7 107.2
C10 S1 O2 106.4 106.4
N4 S1 O2 110.3 106.4
S1 N4 H6 109.5 120.0
S1 N4 H7 109.5 120.0
O3 S1 O2 118.1 123.2
H2 C5 H3 109.4 109.5
H6 N4 H7 109.4 120.1
H9 C1 H10 109.5 109.5
H9 C1 H11 109.4 109.4
H10 C1 H11 109.4 109.5

Torsion Angles for 9E2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N5 C4 N1 N2 181.6 179.9
N2 N1 C4 C3 0.5 359.7
N1 N2 C5 H2 348.6 330.0
N1 N2 C5 H3 105.3 210.0
N1 N2 C2 C1 180.0 179.9
C3 C4 N1 N2 0.5 359.7
C4 C3 C2 C1 180.4 180.0
N2 C5 C6 O1 251.9 0.0
C6 C5 N2 H2 238.3 120.0
C6 C5 N2 H3 121.7 240.0
H2 C5 N2 H3 243.3 120.0
C2 N2 C5 H2 171.5 149.5
C2 N2 C5 H3 288.2 29.5
C3 C2 N2 C1 181.4 179.7
N2 C2 C1 H9 90.8 269.7
N2 C2 C1 H10 210.8 29.7
N2 C2 C1 H11 330.8 149.7
N2 C5 C6 H2 121.7 240.0
N2 C5 C6 H3 238.3 120.0
N3 C6 C5 O1 189.3 180.0
C5 C6 N3 H8 330.7 5.2
H2 C5 C6 H3 116.7 240.0
N2 C2 C3 C1 178.6 180.3
C3 C2 C1 H9 269.1 90.0
C3 C2 C1 H10 29.2 210.0
C3 C2 C1 H11 149.2 330.1
N1 C4 C3 CL1 181.2 180.0
CL1 C3 C2 C1 359.5 360.0
H9 C1 C2 H10 239.9 240.0
H9 C1 C2 H11 120.0 119.9
H10 C1 C2 H11 240.0 240.0
C5 C6 N3 O1 170.1 180.0
N3 C6 C5 H2 319.6 300.0
N3 C6 C5 H3 202.9 60.0
C6 N3 C7 C12 359.7 33.7
C5 C6 O1 N3 189.6 180.0
O1 C6 C5 H2 130.2 120.0
O1 C6 C5 H3 13.6 240.0
O1 C6 N3 H8 160.6 185.2
C5 C6 N3 C7 150.7 185.3
N3 C7 C8 H5 1.1 0.6
N3 C7 C12 H12 359.2 359.8
C7 C8 C9 C10 360.0 0.6
C7 C8 C9 H4 180.0 180.5
C12 C7 C8 H5 180.3 179.8
C7 C12 C11 C10 359.5 0.0
C7 C12 C11 H1 179.5 179.7
C11 C10 C9 C8 359.5 359.9
C8 C9 C10 S1 180.4 180.0
C10 C9 C8 H4 180.0 180.1
C12 C11 C10 C9 0.7 359.8
C12 C11 C10 S1 179.8 179.7
C10 C11 C12 H1 180.0 180.3
C8 C9 C10 H4 180.0 179.9
C11 C10 C9 S1 179.1 179.9
C9 C10 C11 H1 180.7 180.1
N4 S1 C10 C9 123.9 269.9
C9 C10 S1 O2 242.1 23.4
C8 C9 C10 C11 359.5 359.9
C12 C11 C10 H1 180.0 179.7
C9 C10 C11 S1 180.9 180.1
C11 C10 C9 H4 179.5 180.0
N4 S1 C10 C11 304.8 90.0
C11 C10 S1 O2 63.1 203.5
C11 C10 S1 C9 180.9 180.1
S1 C10 C9 H4 0.4 0.1
S1 C10 C11 H1 359.8 0.0
N4 S1 C10 O2 241.8 246.5
C10 S1 N4 H6 180.0 359.9
C10 S1 N4 H7 300.0 180.0
O3 S1 C10 O2 125.3 133.0
C9 C10 S1 N4 123.9 269.9
C11 C10 S1 N4 304.8 90.0
C10 S1 N4 O2 115.7 113.5
O3 S1 N4 O2 228.1 227.1
H6 N4 S1 H7 240.0 179.9
C10 S1 O3 O2 242.6 237.0
N4 S1 O3 O2 127.7 122.9
O3 S1 N4 H6 292.4 113.5
O3 S1 N4 H7 52.4 293.6
N4 S1 O2 C10 116.5 114.0
O2 S1 N4 H6 64.3 246.5
O2 S1 N4 H7 184.3 66.5
C12 C11 H1 C10 180.0 180.3
H1 C11 C10 C9 180.7 180.1
H1 C11 C10 S1 359.8 0.0
N2 C5 H2 H3 114.7 240.0
H2 C5 C6 N3 319.6 300.0
H2 C5 C6 O1 130.2 120.0
C6 C5 H2 H3 245.3 120.1
N2 C5 H3 H2 245.3 120.0
H3 C5 C6 N3 202.9 60.0
H3 C5 C6 O1 13.6 240.0
C6 C5 H3 H2 114.7 239.9
C8 C9 H4 C10 180.0 180.1
H4 C9 C10 S1 0.4 0.1
H5 C8 C9 C10 180.0 180.0
H5 C8 C9 H4 360.0 359.9
H6 N4 S1 C10 180.0 359.9
H6 N4 S1 O2 64.3 246.5
S1 N4 H6 H7 120.0 180.1
H7 N4 S1 C10 300.0 180.0
H7 N4 S1 O2 184.3 66.5
S1 N4 H7 H6 240.0 179.9
H8 N3 C6 O1 160.6 185.2
H8 N3 C7 C12 179.6 213.8
C2 C1 H9 H10 120.0 120.0
C2 C1 H9 H11 240.0 240.0
H10 C1 H9 H11 120.0 120.1
C2 C1 H10 H9 240.0 240.0
C2 C1 H10 H11 120.0 120.0
H9 C1 H10 H11 240.0 240.0
C2 C1 H11 H9 120.0 119.9
C2 C1 H11 H10 240.0 240.0
H9 C1 H11 H10 120.0 120.1
H12 C12 C11 C10 179.5 180.0
H12 C12 C11 H1 359.5 359.7