PDB Chemical Component 9E2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9E2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O5 |
N5 |
1.221 |
1.218 |
N5 |
O4 |
1.224 |
1.218 |
N5 |
C4 |
1.469 |
1.480 |
N1 |
C4 |
1.305 |
1.308 |
N1 |
N2 |
1.403 |
1.401 |
C4 |
C3 |
1.405 |
1.399 |
N2 |
C5 |
1.460 |
1.465 |
N2 |
C2 |
1.341 |
1.351 |
C5 |
C6 |
1.515 |
1.506 |
C3 |
C2 |
1.348 |
1.354 |
C3 |
CL1 |
1.731 |
1.736 |
C2 |
C1 |
1.507 |
1.506 |
C6 |
N3 |
1.372 |
1.348 |
C6 |
O1 |
1.232 |
1.213 |
N3 |
C7 |
1.408 |
1.399 |
C7 |
C8 |
1.388 |
1.389 |
C7 |
C12 |
1.382 |
1.389 |
C8 |
C9 |
1.390 |
1.381 |
C12 |
C11 |
1.392 |
1.382 |
C9 |
C10 |
1.375 |
1.382 |
C11 |
C10 |
1.385 |
1.383 |
C10 |
S1 |
1.758 |
1.762 |
N4 |
S1 |
1.622 |
1.657 |
O3 |
S1 |
1.432 |
1.421 |
S1 |
O2 |
1.400 |
1.421 |
C11 |
H1 |
1.080 |
1.080 |
C5 |
H2 |
1.100 |
1.090 |
C5 |
H3 |
1.100 |
1.090 |
C9 |
H4 |
1.080 |
1.080 |
C8 |
H5 |
1.080 |
1.080 |
N4 |
H6 |
1.000 |
0.969 |
N4 |
H7 |
1.000 |
0.971 |
N3 |
H8 |
0.999 |
0.970 |
C1 |
H9 |
1.100 |
1.091 |
C1 |
H10 |
1.100 |
1.090 |
C1 |
H11 |
1.100 |
1.090 |
C12 |
H12 |
1.080 |
1.080 |
Bond Angles for 9E2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O5 |
N5 |
O4 |
121.5 |
120.0 |
C4 |
N1 |
N2 |
107.4 |
108.3 |
N1 |
C4 |
C3 |
108.5 |
108.2 |
N2 |
C5 |
H2 |
106.5 |
109.5 |
N2 |
C5 |
H3 |
106.5 |
109.5 |
N2 |
C2 |
C1 |
125.2 |
126.1 |
C5 |
C6 |
N3 |
119.7 |
120.0 |
C5 |
C6 |
O1 |
116.8 |
120.0 |
C6 |
C5 |
H2 |
106.5 |
109.5 |
C6 |
C5 |
H3 |
106.5 |
109.5 |
C3 |
C2 |
C1 |
127.1 |
126.2 |
C2 |
C1 |
H9 |
109.5 |
109.4 |
C2 |
C1 |
H10 |
109.5 |
109.5 |
C2 |
C1 |
H11 |
109.5 |
109.5 |
N3 |
C6 |
O1 |
122.8 |
120.0 |
C6 |
N3 |
H8 |
117.7 |
120.0 |
N3 |
C7 |
C12 |
122.3 |
120.1 |
C7 |
C8 |
H5 |
120.0 |
120.0 |
C7 |
C12 |
H12 |
119.8 |
120.0 |
C8 |
C9 |
C10 |
121.3 |
120.0 |
C8 |
C9 |
H4 |
119.4 |
120.0 |
C12 |
C11 |
C10 |
120.9 |
120.1 |
C12 |
C11 |
H1 |
119.6 |
120.0 |
C11 |
C10 |
C9 |
118.4 |
120.2 |
C9 |
C10 |
S1 |
118.7 |
119.9 |
C10 |
C9 |
H4 |
119.3 |
120.0 |
C11 |
C10 |
S1 |
122.8 |
119.9 |
C10 |
C11 |
H1 |
119.6 |
120.0 |
N4 |
S1 |
C10 |
107.7 |
107.2 |
C10 |
S1 |
O2 |
106.4 |
106.4 |
N4 |
S1 |
O2 |
110.3 |
106.4 |
S1 |
N4 |
H6 |
109.5 |
120.0 |
S1 |
N4 |
H7 |
109.5 |
120.0 |
O3 |
S1 |
O2 |
118.1 |
123.2 |
H2 |
C5 |
H3 |
109.4 |
109.5 |
H6 |
N4 |
H7 |
109.4 |
120.1 |
H9 |
C1 |
H10 |
109.5 |
109.5 |
H9 |
C1 |
H11 |
109.4 |
109.4 |
H10 |
C1 |
H11 |
109.4 |
109.5 |
Torsion Angles for 9E2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N5 |
C4 |
N1 |
N2 |
181.6 |
179.9 |
N2 |
N1 |
C4 |
C3 |
0.5 |
359.7 |
N1 |
N2 |
C5 |
H2 |
348.6 |
330.0 |
N1 |
N2 |
C5 |
H3 |
105.3 |
210.0 |
N1 |
N2 |
C2 |
C1 |
180.0 |
179.9 |
C3 |
C4 |
N1 |
N2 |
0.5 |
359.7 |
C4 |
C3 |
C2 |
C1 |
180.4 |
180.0 |
N2 |
C5 |
C6 |
O1 |
251.9 |
0.0 |
C6 |
C5 |
N2 |
H2 |
238.3 |
120.0 |
C6 |
C5 |
N2 |
H3 |
121.7 |
240.0 |
H2 |
C5 |
N2 |
H3 |
243.3 |
120.0 |
C2 |
N2 |
C5 |
H2 |
171.5 |
149.5 |
C2 |
N2 |
C5 |
H3 |
288.2 |
29.5 |
C3 |
C2 |
N2 |
C1 |
181.4 |
179.7 |
N2 |
C2 |
C1 |
H9 |
90.8 |
269.7 |
N2 |
C2 |
C1 |
H10 |
210.8 |
29.7 |
N2 |
C2 |
C1 |
H11 |
330.8 |
149.7 |
N2 |
C5 |
C6 |
H2 |
121.7 |
240.0 |
N2 |
C5 |
C6 |
H3 |
238.3 |
120.0 |
N3 |
C6 |
C5 |
O1 |
189.3 |
180.0 |
C5 |
C6 |
N3 |
H8 |
330.7 |
5.2 |
H2 |
C5 |
C6 |
H3 |
116.7 |
240.0 |
N2 |
C2 |
C3 |
C1 |
178.6 |
180.3 |
C3 |
C2 |
C1 |
H9 |
269.1 |
90.0 |
C3 |
C2 |
C1 |
H10 |
29.2 |
210.0 |
C3 |
C2 |
C1 |
H11 |
149.2 |
330.1 |
N1 |
C4 |
C3 |
CL1 |
181.2 |
180.0 |
CL1 |
C3 |
C2 |
C1 |
359.5 |
360.0 |
H9 |
C1 |
C2 |
H10 |
239.9 |
240.0 |
H9 |
C1 |
C2 |
H11 |
120.0 |
119.9 |
H10 |
C1 |
C2 |
H11 |
240.0 |
240.0 |
C5 |
C6 |
N3 |
O1 |
170.1 |
180.0 |
N3 |
C6 |
C5 |
H2 |
319.6 |
300.0 |
N3 |
C6 |
C5 |
H3 |
202.9 |
60.0 |
C6 |
N3 |
C7 |
C12 |
359.7 |
33.7 |
C5 |
C6 |
O1 |
N3 |
189.6 |
180.0 |
O1 |
C6 |
C5 |
H2 |
130.2 |
120.0 |
O1 |
C6 |
C5 |
H3 |
13.6 |
240.0 |
O1 |
C6 |
N3 |
H8 |
160.6 |
185.2 |
C5 |
C6 |
N3 |
C7 |
150.7 |
185.3 |
N3 |
C7 |
C8 |
H5 |
1.1 |
0.6 |
N3 |
C7 |
C12 |
H12 |
359.2 |
359.8 |
C7 |
C8 |
C9 |
C10 |
360.0 |
0.6 |
C7 |
C8 |
C9 |
H4 |
180.0 |
180.5 |
C12 |
C7 |
C8 |
H5 |
180.3 |
179.8 |
C7 |
C12 |
C11 |
C10 |
359.5 |
0.0 |
C7 |
C12 |
C11 |
H1 |
179.5 |
179.7 |
C11 |
C10 |
C9 |
C8 |
359.5 |
359.9 |
C8 |
C9 |
C10 |
S1 |
180.4 |
180.0 |
C10 |
C9 |
C8 |
H4 |
180.0 |
180.1 |
C12 |
C11 |
C10 |
C9 |
0.7 |
359.8 |
C12 |
C11 |
C10 |
S1 |
179.8 |
179.7 |
C10 |
C11 |
C12 |
H1 |
180.0 |
180.3 |
C8 |
C9 |
C10 |
H4 |
180.0 |
179.9 |
C11 |
C10 |
C9 |
S1 |
179.1 |
179.9 |
C9 |
C10 |
C11 |
H1 |
180.7 |
180.1 |
N4 |
S1 |
C10 |
C9 |
123.9 |
269.9 |
C9 |
C10 |
S1 |
O2 |
242.1 |
23.4 |
C8 |
C9 |
C10 |
C11 |
359.5 |
359.9 |
C12 |
C11 |
C10 |
H1 |
180.0 |
179.7 |
C9 |
C10 |
C11 |
S1 |
180.9 |
180.1 |
C11 |
C10 |
C9 |
H4 |
179.5 |
180.0 |
N4 |
S1 |
C10 |
C11 |
304.8 |
90.0 |
C11 |
C10 |
S1 |
O2 |
63.1 |
203.5 |
C11 |
C10 |
S1 |
C9 |
180.9 |
180.1 |
S1 |
C10 |
C9 |
H4 |
0.4 |
0.1 |
S1 |
C10 |
C11 |
H1 |
359.8 |
0.0 |
N4 |
S1 |
C10 |
O2 |
241.8 |
246.5 |
C10 |
S1 |
N4 |
H6 |
180.0 |
359.9 |
C10 |
S1 |
N4 |
H7 |
300.0 |
180.0 |
O3 |
S1 |
C10 |
O2 |
125.3 |
133.0 |
C9 |
C10 |
S1 |
N4 |
123.9 |
269.9 |
C11 |
C10 |
S1 |
N4 |
304.8 |
90.0 |
C10 |
S1 |
N4 |
O2 |
115.7 |
113.5 |
O3 |
S1 |
N4 |
O2 |
228.1 |
227.1 |
H6 |
N4 |
S1 |
H7 |
240.0 |
179.9 |
C10 |
S1 |
O3 |
O2 |
242.6 |
237.0 |
N4 |
S1 |
O3 |
O2 |
127.7 |
122.9 |
O3 |
S1 |
N4 |
H6 |
292.4 |
113.5 |
O3 |
S1 |
N4 |
H7 |
52.4 |
293.6 |
N4 |
S1 |
O2 |
C10 |
116.5 |
114.0 |
O2 |
S1 |
N4 |
H6 |
64.3 |
246.5 |
O2 |
S1 |
N4 |
H7 |
184.3 |
66.5 |
C12 |
C11 |
H1 |
C10 |
180.0 |
180.3 |
H1 |
C11 |
C10 |
C9 |
180.7 |
180.1 |
H1 |
C11 |
C10 |
S1 |
359.8 |
0.0 |
N2 |
C5 |
H2 |
H3 |
114.7 |
240.0 |
H2 |
C5 |
C6 |
N3 |
319.6 |
300.0 |
H2 |
C5 |
C6 |
O1 |
130.2 |
120.0 |
C6 |
C5 |
H2 |
H3 |
245.3 |
120.1 |
N2 |
C5 |
H3 |
H2 |
245.3 |
120.0 |
H3 |
C5 |
C6 |
N3 |
202.9 |
60.0 |
H3 |
C5 |
C6 |
O1 |
13.6 |
240.0 |
C6 |
C5 |
H3 |
H2 |
114.7 |
239.9 |
C8 |
C9 |
H4 |
C10 |
180.0 |
180.1 |
H4 |
C9 |
C10 |
S1 |
0.4 |
0.1 |
H5 |
C8 |
C9 |
C10 |
180.0 |
180.0 |
H5 |
C8 |
C9 |
H4 |
360.0 |
359.9 |
H6 |
N4 |
S1 |
C10 |
180.0 |
359.9 |
H6 |
N4 |
S1 |
O2 |
64.3 |
246.5 |
S1 |
N4 |
H6 |
H7 |
120.0 |
180.1 |
H7 |
N4 |
S1 |
C10 |
300.0 |
180.0 |
H7 |
N4 |
S1 |
O2 |
184.3 |
66.5 |
S1 |
N4 |
H7 |
H6 |
240.0 |
179.9 |
H8 |
N3 |
C6 |
O1 |
160.6 |
185.2 |
H8 |
N3 |
C7 |
C12 |
179.6 |
213.8 |
C2 |
C1 |
H9 |
H10 |
120.0 |
120.0 |
C2 |
C1 |
H9 |
H11 |
240.0 |
240.0 |
H10 |
C1 |
H9 |
H11 |
120.0 |
120.1 |
C2 |
C1 |
H10 |
H9 |
240.0 |
240.0 |
C2 |
C1 |
H10 |
H11 |
120.0 |
120.0 |
H9 |
C1 |
H10 |
H11 |
240.0 |
240.0 |
C2 |
C1 |
H11 |
H9 |
120.0 |
119.9 |
C2 |
C1 |
H11 |
H10 |
240.0 |
240.0 |
H9 |
C1 |
H11 |
H10 |
120.0 |
120.1 |
H12 |
C12 |
C11 |
C10 |
179.5 |
180.0 |
H12 |
C12 |
C11 |
H1 |
359.5 |
359.7 |