PDB Chemical Component 9DZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9DZ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CA2 |
C97 |
1.491 |
1.507 |
| C98 |
C97 |
1.382 |
1.382 |
| C98 |
C99 |
1.380 |
1.383 |
| C97 |
C96 |
1.395 |
1.382 |
| CA1 |
C99 |
1.509 |
1.507 |
| C99 |
CA0 |
1.401 |
1.382 |
| C96 |
C95 |
1.397 |
1.383 |
| CA0 |
C95 |
1.402 |
1.382 |
| C95 |
C94 |
1.520 |
1.507 |
| C94 |
C93 |
1.539 |
1.530 |
| C93 |
C92 |
1.552 |
1.530 |
| OA4 |
CA3 |
1.220 |
1.214 |
| C92 |
C91 |
1.549 |
1.530 |
| NA5 |
CA3 |
1.316 |
1.348 |
| CA3 |
C91 |
1.535 |
1.507 |
| C91 |
N90 |
1.457 |
1.469 |
| C91 |
H1 |
1.100 |
1.089 |
| C92 |
H2 |
1.100 |
1.089 |
| C92 |
H3 |
1.101 |
1.090 |
| C93 |
H4 |
1.100 |
1.090 |
| C93 |
H5 |
1.100 |
1.091 |
| C94 |
H6 |
1.100 |
1.090 |
| C94 |
H7 |
1.100 |
1.090 |
| C96 |
H8 |
1.080 |
1.080 |
| C98 |
H9 |
1.081 |
1.081 |
| CA0 |
H10 |
1.080 |
1.081 |
| CA1 |
H11 |
1.100 |
1.089 |
| CA1 |
H12 |
1.100 |
1.090 |
| CA1 |
H13 |
1.100 |
1.090 |
| CA2 |
H14 |
1.100 |
1.090 |
| CA2 |
H15 |
1.100 |
1.089 |
| CA2 |
H16 |
1.100 |
1.090 |
| N90 |
H17 |
1.000 |
1.009 |
| N90 |
H18 |
1.000 |
1.010 |
| NA5 |
H20 |
1.000 |
0.970 |
| NA5 |
H21 |
1.000 |
0.970 |
Bond Angles for 9DZ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C98 |
C99 |
CA0 |
119.7 |
119.9 |
| C99 |
C98 |
H9 |
119.9 |
120.0 |
| C97 |
C96 |
H8 |
120.4 |
120.1 |
| C99 |
CA0 |
H10 |
119.9 |
119.9 |
| C95 |
C94 |
H6 |
108.7 |
109.5 |
| C95 |
C94 |
H7 |
108.7 |
109.4 |
| C94 |
C93 |
H4 |
108.3 |
109.5 |
| C94 |
C93 |
H5 |
108.3 |
109.5 |
| C93 |
C92 |
H2 |
107.7 |
109.5 |
| C93 |
C92 |
H3 |
107.7 |
109.5 |
| C92 |
C91 |
N90 |
111.7 |
109.5 |
| C92 |
C91 |
H1 |
107.4 |
109.5 |
| CA3 |
C91 |
N90 |
108.4 |
109.5 |
| CA3 |
C91 |
H1 |
107.5 |
109.4 |
| N90 |
C91 |
H1 |
108.5 |
109.5 |
| C91 |
N90 |
H17 |
109.5 |
111.0 |
| C91 |
N90 |
H18 |
109.4 |
111.0 |
| H2 |
C92 |
H3 |
109.5 |
109.5 |
| H4 |
C93 |
H5 |
109.4 |
109.4 |
| H6 |
C94 |
H7 |
109.5 |
109.4 |
| H11 |
CA1 |
H12 |
109.5 |
109.5 |
| H11 |
CA1 |
H13 |
109.5 |
109.5 |
| H12 |
CA1 |
H13 |
109.4 |
109.5 |
| H14 |
CA2 |
H15 |
109.5 |
109.4 |
| H14 |
CA2 |
H16 |
109.5 |
109.5 |
| H15 |
CA2 |
H16 |
109.4 |
109.5 |
| H17 |
N90 |
H18 |
109.4 |
111.0 |
| H20 |
NA5 |
H21 |
120.0 |
120.0 |
Torsion Angles for 9DZ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA2 |
C97 |
C96 |
H8 |
359.9 |
0.0 |
| C98 |
C97 |
C96 |
H8 |
179.9 |
180.0 |
| C98 |
C99 |
CA0 |
H10 |
180.1 |
180.0 |
| CA1 |
C99 |
C98 |
H9 |
0.1 |
0.0 |
| CA1 |
C99 |
CA0 |
H10 |
359.9 |
359.8 |
| CA0 |
C99 |
C98 |
H9 |
180.0 |
179.8 |
| C96 |
C95 |
C94 |
H6 |
25.3 |
330.0 |
| C96 |
C95 |
C94 |
H7 |
144.4 |
210.0 |
| CA0 |
C95 |
C94 |
H6 |
204.9 |
149.7 |
| CA0 |
C95 |
C94 |
H7 |
324.0 |
29.7 |
| C95 |
C94 |
C93 |
H4 |
308.9 |
59.9 |
| C95 |
C94 |
C93 |
H5 |
67.4 |
300.0 |
| H6 |
C94 |
C95 |
H7 |
240.9 |
119.9 |
| C94 |
C93 |
C92 |
H2 |
204.5 |
60.0 |
| C94 |
C93 |
C92 |
H3 |
322.5 |
299.9 |
| H4 |
C93 |
C94 |
H5 |
241.4 |
119.9 |
| C93 |
C92 |
C91 |
N90 |
181.2 |
294.9 |
| C93 |
C92 |
C91 |
H1 |
300.1 |
55.0 |
| H2 |
C92 |
C93 |
H3 |
242.0 |
120.1 |
| OA4 |
CA3 |
C91 |
H1 |
166.7 |
220.0 |
| CA3 |
C91 |
C92 |
N90 |
237.4 |
240.0 |
| CA3 |
C91 |
C92 |
H1 |
118.5 |
120.0 |
| N90 |
C91 |
C92 |
H1 |
241.1 |
239.9 |
| C92 |
C91 |
N90 |
H17 |
180.0 |
300.0 |
| C92 |
C91 |
N90 |
H18 |
300.0 |
64.0 |
| NA5 |
CA3 |
C91 |
H1 |
345.7 |
40.0 |
| C92 |
C91 |
CA3 |
N90 |
124.4 |
120.0 |
| C92 |
C91 |
CA3 |
H1 |
241.6 |
240.0 |
| N90 |
C91 |
CA3 |
H1 |
117.1 |
120.0 |
| CA3 |
C91 |
N90 |
H17 |
305.3 |
60.0 |
| CA3 |
C91 |
N90 |
H18 |
65.3 |
183.9 |
| C92 |
C91 |
N90 |
H1 |
118.2 |
120.1 |
| CA3 |
C91 |
N90 |
H1 |
243.5 |
240.0 |
| H17 |
N90 |
C91 |
H18 |
240.0 |
236.1 |
| C92 |
C91 |
H1 |
N90 |
239.1 |
240.0 |
| CA3 |
C91 |
H1 |
N90 |
117.0 |
120.0 |
| H1 |
C91 |
N90 |
H17 |
61.8 |
180.0 |
| H1 |
C91 |
N90 |
H18 |
181.8 |
303.9 |
| C93 |
C92 |
H2 |
H3 |
116.8 |
239.9 |
| H2 |
C92 |
C91 |
N90 |
60.2 |
55.0 |
| H2 |
C92 |
C91 |
H1 |
179.1 |
175.0 |
| C93 |
C92 |
H3 |
H2 |
243.2 |
120.1 |
| H3 |
C92 |
C91 |
N90 |
302.3 |
175.0 |
| H3 |
C92 |
C91 |
H1 |
61.1 |
295.1 |
| C94 |
C93 |
H4 |
H5 |
117.8 |
240.0 |
| H4 |
C93 |
C92 |
H2 |
83.8 |
180.0 |
| H4 |
C93 |
C92 |
H3 |
201.8 |
60.0 |
| C94 |
C93 |
H5 |
H4 |
242.2 |
120.0 |
| H5 |
C93 |
C92 |
H2 |
325.2 |
300.0 |
| H5 |
C93 |
C92 |
H3 |
83.2 |
180.0 |
| C95 |
C94 |
H6 |
H7 |
118.6 |
240.1 |
| H6 |
C94 |
C93 |
H4 |
188.4 |
180.0 |
| H6 |
C94 |
C93 |
H5 |
307.0 |
60.0 |
| C95 |
C94 |
H7 |
H6 |
241.4 |
119.9 |
| H7 |
C94 |
C93 |
H4 |
69.3 |
299.9 |
| H7 |
C94 |
C93 |
H5 |
187.9 |
180.0 |
| H9 |
C98 |
C99 |
CA0 |
180.0 |
179.8 |
| H12 |
CA1 |
H11 |
H13 |
120.0 |
120.0 |
| H11 |
CA1 |
H12 |
H13 |
240.0 |
240.0 |
| H11 |
CA1 |
H13 |
H12 |
120.0 |
120.0 |
| H15 |
CA2 |
H14 |
H16 |
119.9 |
120.0 |
| H14 |
CA2 |
H15 |
H16 |
240.0 |
240.0 |
| H14 |
CA2 |
H16 |
H15 |
120.0 |
120.0 |
| H17 |
N90 |
C91 |
H1 |
61.8 |
180.0 |
| C91 |
N90 |
H17 |
H18 |
120.0 |
123.9 |
| H18 |
N90 |
C91 |
H1 |
181.8 |
303.9 |
| C91 |
N90 |
H18 |
H17 |
240.0 |
236.1 |