PDB Chemical Component 9DI

Ideal Model

Chemical Description

Name 9-DEAZAINOSINE
Formula C11 H13 N3 O5
Formal charge 0
Molecular weight 267.238 g/mol
Component type NON-POLYMER

Chemical features

Atom count 32
Chiral atom count 4
Chiral atoms C4' C1' C2' C3'
Bond count 34
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) (1S)-1,4-anhydro-1-(4-oxo-4,5-dihydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)-D-ribitol
Systematic name (OpenEye OEToolkits) 7-[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3,5-dihydropyrrolo[2,3-e]pyrimidin-4-one

Chemical Descriptors

Stereo SMILES (CACTVS) OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)c2c[nH]c3C(=O)NC=Nc23
SMILES (CACTVS) OC[CH]1O[CH]([CH](O)[CH]1O)c2c[nH]c3C(=O)NC=Nc23
Stereo SMILES (OpenEye) c1c(c2c([nH]1)C(=O)NC=N2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O
InChI descriptor InChI=1S/C11H13N3O5/c15-2-5-8(16)9(17)10(19-5)4-1-12-7-6(4)13-3-14-11(7)18/h1,3,5,8-10,12,15-17H,2H2,(H,13,14,18)/t5-,8-,9-,10+/m1/s1
InChIKey descriptor WKDMPDYUJKSXBW-KBHCAIDQSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1A9P
Processing site RCSB