PDB Chemical Component 9DA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9DA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.388 |
1.320 |
N1 |
C6 |
1.409 |
1.329 |
C2 |
N3 |
1.344 |
1.315 |
C2 |
HC2 |
1.103 |
1.080 |
N3 |
C4 |
1.377 |
1.336 |
C4 |
C5 |
1.389 |
1.405 |
C4 |
C9 |
1.394 |
1.459 |
C5 |
C6 |
1.429 |
1.398 |
C5 |
N7 |
1.380 |
1.376 |
C6 |
N6 |
1.248 |
1.385 |
N6 |
HN61 |
1.020 |
0.970 |
N6 |
HN62 |
1.020 |
0.971 |
N7 |
C8 |
1.352 |
1.364 |
N7 |
HN7 |
1.020 |
0.970 |
C8 |
C9 |
1.378 |
1.346 |
C8 |
HC8 |
1.103 |
1.080 |
C9 |
HC9 |
1.103 |
1.080 |
Bond Angles for 9DA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
126.6 |
121.4 |
N1 |
C2 |
N3 |
121.7 |
122.4 |
N1 |
C2 |
HC2 |
120.8 |
118.8 |
N1 |
C6 |
C5 |
111.2 |
118.6 |
N1 |
C6 |
N6 |
118.5 |
120.7 |
N3 |
C2 |
HC2 |
117.5 |
118.8 |
C2 |
N3 |
C4 |
113.5 |
120.4 |
N3 |
C4 |
C5 |
127.6 |
119.2 |
N3 |
C4 |
C9 |
124.6 |
134.9 |
C5 |
C4 |
C9 |
107.7 |
106.0 |
C4 |
C5 |
C6 |
119.4 |
118.2 |
C4 |
C5 |
N7 |
108.5 |
107.3 |
C4 |
C9 |
C8 |
105.9 |
107.1 |
C4 |
C9 |
HC9 |
127.5 |
126.5 |
C6 |
C5 |
N7 |
132.2 |
134.6 |
C5 |
C6 |
N6 |
130.2 |
120.7 |
C5 |
N7 |
C8 |
106.8 |
109.8 |
C5 |
N7 |
HN7 |
127.4 |
125.1 |
C6 |
N6 |
HN61 |
109.0 |
120.1 |
C6 |
N6 |
HN62 |
118.5 |
120.0 |
HN61 |
N6 |
HN62 |
108.9 |
119.9 |
C8 |
N7 |
HN7 |
125.8 |
125.1 |
N7 |
C8 |
C9 |
111.1 |
109.9 |
N7 |
C8 |
HC8 |
123.7 |
125.1 |
C9 |
C8 |
HC8 |
125.2 |
125.0 |
C8 |
C9 |
HC9 |
126.6 |
126.5 |
Torsion Angles for 9DA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
C5 |
360.0 |
0.2 |
C2 |
N1 |
C6 |
N6 |
180.0 |
180.0 |
N3 |
C2 |
N1 |
HC2 |
180.0 |
180.0 |
N1 |
C2 |
N3 |
C4 |
360.0 |
-0.0 |
C6 |
N1 |
C2 |
N3 |
0.1 |
-0.0 |
C6 |
N1 |
C2 |
HC2 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
N1 |
359.9 |
359.5 |
N1 |
C6 |
C5 |
N7 |
180.0 |
180.4 |
C5 |
C6 |
N1 |
N6 |
180.0 |
180.2 |
N1 |
C6 |
N6 |
HN61 |
54.8 |
179.7 |
N1 |
C6 |
N6 |
HN62 |
180.0 |
-0.0 |
N3 |
C2 |
N1 |
C6 |
0.1 |
-0.0 |
N1 |
C2 |
N3 |
HC2 |
180.0 |
180.0 |
C2 |
N3 |
C4 |
C5 |
360.0 |
359.8 |
C2 |
N3 |
C4 |
C9 |
180.0 |
180.0 |
HC2 |
C2 |
N1 |
C6 |
180.1 |
180.0 |
N1 |
C2 |
HC2 |
N3 |
180.0 |
180.0 |
HC2 |
C2 |
N3 |
C4 |
180.0 |
180.0 |
C4 |
N3 |
C2 |
HC2 |
180.0 |
180.0 |
C5 |
C4 |
N3 |
C9 |
180.0 |
179.8 |
N3 |
C4 |
C5 |
C6 |
0.1 |
0.5 |
N3 |
C4 |
C5 |
N7 |
180.0 |
179.8 |
N3 |
C4 |
C9 |
C8 |
179.9 |
180.0 |
N3 |
C4 |
C9 |
HC9 |
360.0 |
-0.0 |
N1 |
C6 |
C5 |
C4 |
359.9 |
359.5 |
N3 |
C4 |
C5 |
C9 |
180.0 |
180.2 |
C5 |
C4 |
C9 |
C8 |
360.0 |
0.2 |
C5 |
C4 |
C9 |
HC9 |
180.0 |
180.2 |
C6 |
C5 |
C4 |
N7 |
180.1 |
180.6 |
C4 |
C5 |
C6 |
N6 |
180.0 |
179.8 |
C4 |
C5 |
N7 |
C8 |
0.1 |
0.4 |
C4 |
C5 |
N7 |
HN7 |
180.1 |
180.1 |
N3 |
C4 |
C9 |
C5 |
180.0 |
179.8 |
C9 |
C4 |
C5 |
C6 |
180.0 |
180.3 |
C9 |
C4 |
C5 |
N7 |
360.0 |
359.7 |
N7 |
C8 |
C9 |
C4 |
0.1 |
-0.0 |
C4 |
C9 |
C8 |
HC8 |
180.0 |
179.9 |
C8 |
C9 |
C4 |
HC9 |
180.0 |
180.0 |
N1 |
C6 |
C5 |
N6 |
180.0 |
179.8 |
C6 |
C5 |
C4 |
C9 |
180.0 |
180.3 |
C4 |
C5 |
C6 |
N7 |
179.9 |
179.2 |
C6 |
C5 |
N7 |
C8 |
180.0 |
179.6 |
C6 |
C5 |
N7 |
HN7 |
0.0 |
359.4 |
C5 |
C6 |
N6 |
HN61 |
234.8 |
359.5 |
C5 |
C6 |
N6 |
HN62 |
0.0 |
179.8 |
N7 |
C5 |
C4 |
C9 |
360.0 |
359.7 |
C4 |
C5 |
N7 |
C6 |
180.1 |
180.8 |
N7 |
C5 |
C6 |
N6 |
0.0 |
0.6 |
C8 |
N7 |
C5 |
HN7 |
180.0 |
180.2 |
C5 |
N7 |
C8 |
C9 |
359.9 |
359.8 |
C5 |
N7 |
C8 |
HC8 |
180.0 |
179.8 |
N1 |
C6 |
N6 |
C5 |
180.0 |
180.2 |
N6 |
C6 |
C5 |
N7 |
0.0 |
0.6 |
HN61 |
N6 |
C6 |
HN62 |
234.7 |
179.7 |
C6 |
N6 |
HN61 |
HN62 |
130.7 |
180.3 |
C6 |
N6 |
HN62 |
HN61 |
234.7 |
179.7 |
C4 |
C9 |
C8 |
N7 |
0.1 |
-0.0 |
C5 |
N7 |
C8 |
HN7 |
180.0 |
179.8 |
C9 |
C8 |
N7 |
HC8 |
180.0 |
179.9 |
N7 |
C8 |
C9 |
HC9 |
180.0 |
180.0 |
C5 |
N7 |
HN7 |
C8 |
180.0 |
180.3 |
HN7 |
N7 |
C8 |
C9 |
179.9 |
180.0 |
HN7 |
N7 |
C8 |
HC8 |
359.9 |
0.1 |
C4 |
C9 |
C8 |
HC9 |
180.0 |
180.0 |
C9 |
C8 |
N7 |
HN7 |
179.9 |
180.0 |
N7 |
C8 |
C9 |
HC8 |
180.0 |
180.1 |
HC8 |
C8 |
N7 |
HN7 |
359.9 |
0.1 |
N7 |
C8 |
HC8 |
C9 |
180.0 |
179.9 |
HC8 |
C8 |
C9 |
HC9 |
360.0 |
359.9 |
C4 |
C9 |
HC9 |
C8 |
180.0 |
180.0 |
HC9 |
C9 |
C8 |
HC8 |
360.0 |
359.9 |