PDB Chemical Component 9D6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 9D6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAA CAM 1.552 1.529
CAM NBD 1.499 1.469
CAJ CAL 1.550 1.530
CAJ CAK 1.549 1.530
CAL CAO 1.555 1.530
CBC CAN 1.557 1.530
CBC NBD 1.507 1.469
CBC CAO 1.564 1.530
CAN CAK 1.552 1.530
NBD CAQ 1.487 1.469
CAQ CAX 1.404 1.507
CAX CAG 1.402 1.382
CAX CAF 1.402 1.382
CAG CAE 1.400 1.382
CAF CAD 1.408 1.382
CAE CAW 1.396 1.382
CAD CAW 1.407 1.383
CAW CAP 1.401 1.508
CAP NAS 1.481 1.465
NAS CAV 1.345 1.348
OAB CAV 1.236 1.216
OAC CAZ 1.232 1.219
CAV CAY 1.365 1.470
CAZ CBB 1.364 1.425
CAZ NAT 1.393 1.349
CAY CBB 1.380 1.460
CAY CAI 1.338 1.340
CBB CBA 1.373 1.388
NAT CAH 1.314 1.357
CAI SAU 1.642 1.701
CBA SAU 1.578 1.758
CBA NAR 1.340 1.350
CAH NAR 1.384 1.301
CAN H1 1.100 1.090
CAN H2 1.100 1.089
CAK H3 1.100 1.090
CAK H4 1.100 1.089
CAJ H5 1.100 1.090
CAJ H6 1.099 1.091
CAL H7 1.100 1.091
CAL H8 1.100 1.090
CAO H9 1.100 1.090
CAO H10 1.100 1.090
CBC H11 1.100 1.090
CAM H13 1.100 1.090
CAM H14 1.100 1.090
CAA H15 1.100 1.091
CAA H16 1.100 1.090
CAA H17 1.100 1.090
CAQ H18 1.099 1.091
CAQ H19 1.100 1.090
CAG H20 1.080 1.080
CAE H21 1.080 1.080
CAF H22 1.080 1.080
CAD H23 1.080 1.080
CAP H24 1.100 1.090
CAP H25 1.100 1.090
NAS H26 1.000 0.970
CAH H27 1.080 1.080
CAI H29 1.080 1.079
NAT H30 0.999 0.970

Bond Angles for 9D6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAA CAM H13 107.0 109.5
CAA CAM H14 107.0 109.5
CAM NBD CAQ 104.1 111.0
CAJ CAL CAO 112.2 109.5
CAL CAJ H5 109.0 109.5
CAL CAJ H6 109.0 109.4
CAJ CAL H7 108.8 109.5
CAJ CAL H8 108.8 109.5
CAJ CAK H3 108.7 109.5
CAJ CAK H4 108.7 109.5
CAO CAL H7 108.8 109.4
CAO CAL H8 108.8 109.5
CAL CAO H9 108.8 109.5
CAL CAO H10 108.7 109.5
CBC CAN H1 108.8 109.4
CBC CAN H2 108.8 109.5
CBC NBD CAQ 118.9 111.0
NBD CBC H11 103.8 109.5
CBC CAO H9 108.8 109.4
CBC CAO H10 108.8 109.5
CAK CAN H1 108.8 109.5
CAK CAN H2 108.8 109.5
CAN CAK H3 108.6 109.4
CAN CAK H4 108.6 109.5
NBD CAQ CAX 122.0 109.5
NBD CAQ H18 106.2 109.5
NBD CAQ H19 106.3 109.5
CAQ CAX CAG 119.0 120.0
CAQ CAX CAF 121.0 120.0
CAX CAQ H18 106.2 109.4
CAX CAQ H19 106.2 109.4
CAG CAX CAF 118.4 120.0
CAX CAG CAE 121.4 120.0
CAX CAG H20 119.3 120.0
CAX CAF CAD 120.2 120.0
CAX CAF H22 119.9 120.0
CAG CAE CAW 119.9 120.0
CAE CAG H20 119.3 120.0
CAG CAE H21 120.0 120.0
CAF CAD CAW 120.5 120.0
CAD CAF H22 119.9 120.0
CAF CAD H23 119.8 120.0
CAE CAW CAD 119.2 120.0
CAE CAW CAP 118.8 120.0
CAW CAE H21 120.1 120.0
CAD CAW CAP 121.8 120.0
CAW CAD H23 119.8 120.0
CAW CAP NAS 113.8 109.5
CAW CAP H24 108.4 109.4
CAW CAP H25 108.4 109.5
CAP NAS CAV 121.6 120.0
NAS CAP H24 108.4 109.5
NAS CAP H25 108.4 109.5
CAP NAS H26 119.2 120.0
NAS CAV CAY 121.1 120.0
CAV NAS H26 119.2 120.0
OAB CAV CAY 118.7 120.0
OAC CAZ NAT 114.8 120.6
CAV CAY CBB 132.8 123.0
CAV CAY CAI 114.6 123.1
CAZ CBB CBA 114.9 118.1
CAZ NAT CAH 122.6 120.3
CAZ NAT H30 118.7 119.8
CBB CAY CAI 112.6 113.9
CAY CBB CBA 111.3 111.3
CAY CAI SAU 109.5 112.1
CAY CAI H29 125.3 124.0
CBB CBA SAU 110.7 109.7
CBB CBA NAR 123.9 119.4
NAT CAH NAR 117.1 121.9
NAT CAH H27 121.5 119.1
CAH NAT H30 118.7 119.9
NAR CAH H27 121.4 119.0
H1 CAN H2 109.5 109.5
H3 CAK H4 109.5 109.5
H5 CAJ H6 109.5 109.5
H7 CAL H8 109.5 109.5
H9 CAO H10 109.5 109.5
H13 CAM H14 109.4 109.4
H15 CAA H16 109.4 109.4
H15 CAA H17 109.5 109.4
H16 CAA H17 109.5 109.5
H18 CAQ H19 109.4 109.4
H24 CAP H25 109.5 109.5

Torsion Angles for 9D6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAA CAM NBD CAQ 268.9 71.7
H13 CAM CAA H14 242.8 120.0
CBC NBD CAM CAQ 129.4 124.0
CAM NBD CBC H11 326.7 186.0
CAM NBD CAQ CAX 224.0 199.8
CAM NBD CAQ H18 345.7 319.8
CAM NBD CAQ H19 102.2 79.8
CAL CAJ CAK H3 181.6 180.0
CAL CAJ CAK H4 300.6 60.0
CAO CAL CAJ H7 239.6 240.1
CAO CAL CAJ H8 120.4 120.0
CAJ CAL CAO H9 79.4 59.9
CAJ CAL CAO H10 198.5 179.9
H5 CAJ CAL H6 240.5 120.0
H7 CAL CAJ H8 240.8 240.0
CAJ CAK CAN H1 198.7 180.0
CAJ CAK CAN H2 79.5 300.1
CAN CAK CAJ H3 239.5 119.9
CAN CAK CAJ H4 120.5 239.9
H3 CAK CAJ H4 241.0 120.1
CAO CAL CAJ H5 102.5 300.0
CAO CAL CAJ H6 222.0 180.0
CAJ CAL CAO H7 120.4 120.0
CAJ CAL CAO H8 239.6 239.9
CBC CAO CAL H9 239.6 240.1
CBC CAO CAL H10 120.4 120.1
H7 CAL CAO H8 119.2 119.9
H9 CAO CAL H10 240.9 240.0
CAK CAN CBC H1 239.6 120.0
CAK CAN CBC H2 120.4 240.0
CBC CAN CAK H3 198.6 180.0
CBC CAN CAK H4 79.6 300.0
H1 CAN CBC H2 240.7 120.0
CAM NBD CBC CAQ 238.9 236.0
NBD CBC CAN H1 326.8 60.0
NBD CBC CAN H2 86.1 300.0
NBD CBC CAO H9 78.1 60.0
NBD CBC CAO H10 318.9 300.0
CBC NBD CAQ CAX 99.3 75.8
CBC NBD CAQ H18 221.0 195.8
CBC NBD CAQ H19 337.5 315.8
CBC CAO CAL H7 198.5 180.0
CBC CAO CAL H8 79.3 60.1
CAL CAO CBC H9 120.4 120.0
CAL CAO CBC H10 239.6 239.9
CAO CBC CAN H1 102.4 180.0
CAO CBC CAN H2 221.6 60.0
H9 CAO CBC H10 119.2 120.0
CAJ CAK CAN H3 120.5 240.1
CAJ CAK CAN H4 239.5 120.1
CBC CAN CAK H1 120.4 240.0
CBC CAN CAK H2 239.6 120.0
H1 CAN CAK H2 119.3 240.0
H3 CAK CAN H4 119.0 240.0
CAQ NBD CBC H11 87.8 310.0
NBD CAQ CAX CAG 268.0 84.9
NBD CAQ CAX CAF 102.3 264.7
CAX CAQ NBD H18 238.3 240.0
CAX CAQ NBD H19 121.8 120.0
H18 CAQ NBD H19 243.5 240.0
NBD CAQ CAX H18 121.7 120.0
NBD CAQ CAX H19 238.2 239.9
CAG CAX CAQ CAF 165.7 180.2
CAQ CAX CAG CAE 186.8 180.1
CAQ CAX CAG H20 6.8 360.0
CAQ CAX CAF CAD 172.4 180.0
CAQ CAX CAF H22 352.4 359.9
H18 CAQ CAX H19 116.5 119.9
CAQ CAX CAG CAF 193.9 179.8
CAG CAX CAQ H18 146.3 324.8
CAG CAX CAQ H19 29.8 204.9
CAG CAX CAF CAD 6.6 359.8
CAG CAX CAF H22 186.6 179.7
CAX CAG CAE CAW 3.3 359.9
CAE CAG CAX H20 180.0 180.1
CAX CAG CAE H21 183.3 180.0
CAQ CAX CAF CAG 165.8 180.2
CAF CAX CAQ H18 340.5 144.6
CAF CAX CAQ H19 224.0 24.7
CAF CAX CAG CAE 352.8 0.3
CAF CAX CAG H20 172.9 180.2
CAX CAF CAD CAW 357.6 359.9
CAD CAF CAX H22 180.0 180.1
CAX CAF CAD H23 177.7 180.0
CAE CAG CAX CAF 352.8 0.3
CAX CAG CAE H20 180.0 179.9
CAG CAE CAW CAD 1.1 359.8
CAG CAE CAW CAP 177.2 180.0
CAW CAE CAG H21 180.0 180.0
CAX CAF CAD H22 180.0 179.9
CAE CAW CAD CAF 358.4 0.3
CAF CAD CAW CAP 182.5 180.0
CAW CAD CAF H23 180.0 180.0
CAW CAE CAG H20 183.3 180.0
CAG CAE CAW H21 180.0 180.0
CAF CAD CAW CAE 358.4 0.3
CAD CAW CAE CAP 184.0 179.8
CAE CAW CAD H23 178.4 180.2
CAE CAW CAP NAS 95.6 90.0
CAE CAW CAP H24 216.2 210.0
CAE CAW CAP H25 335.0 329.9
CAW CAD CAF H22 177.6 180.1
CAF CAD CAW H23 180.0 180.0
CAE CAW CAD CAP 175.9 180.2
CAD CAW CAE H21 181.1 179.8
CAD CAW CAP NAS 271.5 270.3
CAD CAW CAP H24 32.2 30.2
CAD CAW CAP H25 150.9 150.2
CAE CAW CAP CAD 184.1 179.8
CAP CAW CAE H21 357.2 360.0
CAP CAW CAD H23 2.5 360.0
CAW CAP NAS CAV 133.8 180.0
NAS CAP CAW H24 239.3 240.0
NAS CAP CAW H25 120.6 120.1
CAW CAP NAS H26 313.8 360.0
H24 CAP CAW H25 241.3 240.1
CAW CAP NAS H24 120.6 119.9
CAW CAP NAS H25 239.4 240.0
CAP NAS CAV CAY 182.6 180.0
CAV NAS CAP H26 180.0 180.0
H24 CAP NAS H25 118.7 120.0
CAV NAS CAP H24 13.1 60.1
CAV NAS CAP H25 254.4 300.0
CAP NAS CAV H26 180.0 180.0
OAB CAV NAS CAY 173.9 180.0
NAS CAV CAY CBB 359.0 180.0
NAS CAV CAY CAI 176.0 359.7
NAS CAV OAB CAY 186.0 180.0
OAB CAV NAS H26 176.5 180.0
OAB CAV CAY CBB 185.1 0.0
OAB CAV CAY CAI 2.1 179.7
OAC CAZ CBB CBA 180.3 180.0
OAC CAZ NAT CAH 182.1 180.0
OAC CAZ NAT H30 2.1 360.0
CAY CAV NAS H26 2.6 0.0
CBB CAY CAV CAI 183.0 180.3
CAV CAY CBB CBA 177.1 179.9
CAV CAY CAI SAU 184.0 179.9
CAV CAY CAI H29 4.0 0.1
CAZ CBB CAY CAI 177.7 180.3
CAY CBB CAZ CBA 182.3 179.9
CAZ CBB CBA SAU 180.1 180.0
CAZ CBB CBA NAR 359.6 359.9
NAT CAZ CBB CBA 358.3 0.0
CAZ NAT CAH NAR 356.3 0.0
CAZ NAT CAH H27 176.3 180.0
CAH NAT CAZ H30 180.0 180.0
CAV CAY CBB CAI 177.1 179.7
CAZ CBB CAY CBA 177.7 180.1
CBB CAY CAI SAU 1.6 359.7
CBB CAY CAI H29 181.6 179.8
CAY CBB CBA SAU 358.3 0.0
CAY CBB CBA NAR 177.8 180.0
CAV CAY CAI CBB 182.4 180.3
CAI CAY CBB CBA 0.0 0.2
CBA CBB CAY CAI 0.0 0.2
CAZ NAT CAH H30 180.0 180.0
NAR CAH NAT H27 180.0 180.0
CAY CAI SAU H29 180.0 180.1
CAY CAI SAU CBA 357.7 0.3
CBB CBA SAU NAR 179.5 179.9
CBB CBA NAR SAU 180.6 180.1
CBA NAR CAH H27 181.6 180.0
CBB CBA NAR CAH 0.4 0.1
NAT CAH NAR H27 180.0 180.0
NAR CAH NAT H30 176.3 180.1
CBC CAN H1 H2 118.8 240.0
CAK CAN H1 H2 241.2 120.1
H1 CAN CAK H3 78.2 300.0
H1 CAN CAK H4 319.2 60.0
CBC CAN H2 H1 241.2 120.0
CAK CAN H2 H1 118.9 240.0
H2 CAN CAK H3 318.9 60.0
H2 CAN CAK H4 199.9 180.0
CAJ CAK H3 H4 118.5 239.9
H3 CAK CAN H1 78.2 300.0
H3 CAK CAN H2 318.9 60.0
CAN CAK H3 H4 241.5 120.0
CAJ CAK H4 H3 241.4 120.0
H4 CAK CAN H1 319.2 60.0
H4 CAK CAN H2 199.9 180.0
CAN CAK H4 H3 118.5 240.0
H5 CAJ CAL CAO 102.5 300.0
CAL CAJ H5 H6 119.2 240.0
H5 CAJ CAL H7 222.9 59.9
H5 CAJ CAL H8 342.1 180.0
H5 CAJ CAK H3 61.3 300.1
H5 CAJ CAK H4 180.4 180.0
H6 CAJ CAL CAO 222.0 180.0
CAL CAJ H6 H5 240.8 120.0
H6 CAJ CAL H7 342.4 299.9
H6 CAJ CAL H8 101.6 59.9
H6 CAJ CAK H3 301.9 60.1
H6 CAJ CAK H4 60.9 300.1
CAJ CAL H7 CAO 237.5 240.0
H7 CAL CAJ H5 222.9 59.9
H7 CAL CAJ H6 342.4 299.9
CAJ CAL H7 H8 118.8 120.1
CAO CAL H7 H8 241.2 240.0
H7 CAL CAO H9 319.0 299.9
H7 CAL CAO H10 78.1 60.0
CAJ CAL H8 CAO 122.5 120.1
H8 CAL CAJ H5 342.1 180.0
H8 CAL CAJ H6 101.6 59.9
CAJ CAL H8 H7 241.2 240.0
CAO CAL H8 H7 118.8 119.9
H8 CAL CAO H9 199.8 180.0
H8 CAL CAO H10 318.9 300.0
H9 CAO CAL H7 319.0 299.9
H9 CAO CAL H8 199.8 180.0
CAL CAO H9 H10 118.7 120.1
CBC CAO H9 H10 241.3 240.0
H10 CAO CAL H7 78.1 60.0
H10 CAO CAL H8 318.9 300.0
CAL CAO H10 H9 241.3 240.0
CBC CAO H10 H9 118.7 119.9
H11 CBC CAN H1 212.6 300.0
H11 CBC CAN H2 331.8 180.0
H11 CBC NBD CAQ 87.8 310.0
H11 CBC CAO H9 190.2 180.0
H11 CBC CAO H10 71.1 60.0
CAA CAM H13 H14 115.6 240.0
H13 CAM NBD CAQ 147.5 191.7
CAA CAM H14 H13 244.4 120.0
H14 CAM NBD CAQ 30.3 311.7
H15 CAA CAM H13 301.4 62.4
H15 CAA CAM H14 58.6 302.4
H16 CAA H15 H17 120.0 119.9
H16 CAA CAM H13 61.4 182.4
H16 CAA CAM H14 178.6 62.5
H15 CAA H16 H17 240.0 240.1
H17 CAA CAM H13 181.4 302.4
H17 CAA CAM H14 298.6 182.5
H15 CAA H17 H16 120.0 119.9
NBD CAQ H18 CAX 228.7 239.9
NBD CAQ H18 H19 114.4 120.0
H18 CAQ CAX CAG 146.3 324.8
H18 CAQ CAX CAF 340.5 144.6
CAX CAQ H18 H19 245.7 240.1
NBD CAQ H19 CAX 131.3 120.1
NBD CAQ H19 H18 245.7 240.0
H19 CAQ CAX CAG 29.8 204.9
H19 CAQ CAX CAF 224.0 24.7
CAX CAQ H19 H18 114.3 119.9
H20 CAG CAX CAF 172.9 180.2
CAX CAG H20 CAE 180.0 180.1
H20 CAG CAE CAW 183.3 180.0
H20 CAG CAE H21 3.3 0.1
CAG CAE H21 CAW 180.0 180.0
H21 CAE CAG H20 3.3 0.1
H21 CAE CAW CAD 181.1 179.8
H21 CAE CAW CAP 357.2 360.0
CAX CAF H22 CAD 180.0 180.1
H22 CAF CAD CAW 177.6 180.1
H22 CAF CAD H23 357.7 0.1
CAF CAD H23 CAW 180.0 180.0
H23 CAD CAF H22 357.7 0.1
H23 CAD CAW CAP 2.5 360.0
CAW CAP H24 NAS 236.1 240.0
CAW CAP H24 H25 118.0 119.9
H24 CAP NAS CAV 13.1 60.1
NAS CAP H24 H25 242.0 239.9
H24 CAP NAS H26 193.1 240.0
CAW CAP H25 NAS 123.9 120.0
CAW CAP H25 H24 242.0 240.1
H25 CAP NAS CAV 254.4 300.0
NAS CAP H25 H24 118.1 120.1
H25 CAP NAS H26 74.4 120.0
CAP NAS H26 CAV 180.0 180.0
H26 NAS CAP H24 193.1 240.0
H26 NAS CAP H25 74.4 120.0
H26 NAS CAV CAY 2.6 0.0
NAT CAH H27 NAR 180.0 180.0
H27 CAH NAT H30 356.3 0.0
CAY CAI H29 SAU 180.0 179.8
CAZ NAT H30 CAH 180.0 180.0
H30 NAT CAH NAR 176.3 180.1
H30 NAT CAH H27 356.3 0.0