PDB Chemical Component 9AM

Ideal Model

Chemical Description

Name 9-AMINO-2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID
Formula C11 H18 N2 O7
Formal charge 0
Molecular weight 290.270 g/mol
Component type D-saccharide

Chemical features

Atom count 38
Chiral atom count 5
Chiral atoms C4 C5 C6 C7 C8
Bond count 38
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5-(acetylamino)-9-amino-2,6-anhydro-3,5,9-trideoxy-D-glycero-D-galacto-non-2-enonic acid
Systematic name (OpenEye OEToolkits) (4S,5R,6R)-5-acetamido-6-[(1R,2R)-3-amino-1,2-dihydroxy-propyl]-4-hydroxy-5,6-dihydro-4H-pyran-2-carboxylic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CC(=O)N[C@@H]1[C@@H](O)C=C(O[C@H]1[C@H](O)[C@H](O)CN)C(O)=O
SMILES (CACTVS) CC(=O)N[CH]1[CH](O)C=C(O[CH]1[CH](O)[CH](O)CN)C(O)=O
Stereo SMILES (OpenEye) CC(=O)N[C@@H]1[C@H](C=C(O[C@H]1[C@@H]([C@@H](CN)O)O)C(=O)O)O
InChI descriptor InChI=1S/C11H18N2O7/c1-4(14)13-8-5(15)2-7(11(18)19)20-10(8)9(17)6(16)3-12/h2,5-6,8-10,15-17H,3,12H2,1H3,(H,13,14)(H,18,19)/t5-,6+,8+,9+,10+/m0/s1
InChIKey descriptor VJTPBNUXDULDQD-UFGQHTETSA-N

Status Information

Last modified 2020-07-17
Created 2000-07-21
Release status REL
Model PDB code 1F8D
Processing site RCSB