PDB Chemical Component 9AE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 9AE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C9 |
C2 |
1.538 |
1.530 |
C2 |
N1 |
1.485 |
1.469 |
C2 |
C3 |
1.528 |
1.530 |
C11 |
C10 |
1.525 |
1.530 |
C7 |
C6 |
1.532 |
1.530 |
N1 |
C10 |
1.480 |
1.469 |
C3 |
C4 |
1.523 |
1.530 |
C4 |
C5 |
1.527 |
1.530 |
C6 |
C5 |
1.531 |
1.530 |
C6 |
C8 |
1.527 |
1.530 |
C10 |
C12 |
1.519 |
1.530 |
N1 |
H1 |
1.000 |
1.009 |
C2 |
H3 |
1.100 |
1.090 |
C3 |
H4 |
1.100 |
1.090 |
C3 |
H5 |
1.100 |
1.091 |
C4 |
H6 |
1.099 |
1.090 |
C4 |
H7 |
1.100 |
1.090 |
C6 |
H8 |
1.100 |
1.090 |
C7 |
H9 |
1.101 |
1.089 |
C7 |
H10 |
1.100 |
1.089 |
C7 |
H11 |
1.100 |
1.090 |
C8 |
H12 |
1.101 |
1.090 |
C8 |
H13 |
1.100 |
1.090 |
C8 |
H14 |
1.100 |
1.090 |
C9 |
H15 |
1.100 |
1.090 |
C9 |
H16 |
1.100 |
1.090 |
C9 |
H17 |
1.100 |
1.091 |
C10 |
H18 |
1.100 |
1.090 |
C12 |
H19 |
1.100 |
1.090 |
C12 |
H20 |
1.100 |
1.090 |
C12 |
H21 |
1.100 |
1.090 |
C11 |
H22 |
1.100 |
1.090 |
C11 |
H23 |
1.100 |
1.090 |
C11 |
H24 |
1.100 |
1.090 |
C5 |
H25 |
1.100 |
1.091 |
C5 |
H26 |
1.100 |
1.090 |
Bond Angles for 9AE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
C2 |
H3 |
106.9 |
109.5 |
C2 |
N1 |
C10 |
113.0 |
111.0 |
C2 |
N1 |
H1 |
108.6 |
111.0 |
C2 |
C3 |
C4 |
109.2 |
109.5 |
C3 |
C2 |
H3 |
107.0 |
109.5 |
C2 |
C3 |
H4 |
109.5 |
109.5 |
C2 |
C3 |
H5 |
109.5 |
109.5 |
C11 |
C10 |
H18 |
109.4 |
109.5 |
C7 |
C6 |
C5 |
113.1 |
109.5 |
C7 |
C6 |
C8 |
112.0 |
109.5 |
C7 |
C6 |
H8 |
107.3 |
109.5 |
N1 |
C10 |
C12 |
109.4 |
109.4 |
C10 |
N1 |
H1 |
108.6 |
111.0 |
N1 |
C10 |
H18 |
110.0 |
109.5 |
C3 |
C4 |
C5 |
110.5 |
109.5 |
C4 |
C3 |
H4 |
109.6 |
109.5 |
C4 |
C3 |
H5 |
109.5 |
109.5 |
C3 |
C4 |
H6 |
109.2 |
109.4 |
C3 |
C4 |
H7 |
109.2 |
109.5 |
C4 |
C5 |
C6 |
112.3 |
109.5 |
C5 |
C4 |
H6 |
109.2 |
109.5 |
C5 |
C4 |
H7 |
109.2 |
109.5 |
C4 |
C5 |
H25 |
108.8 |
109.5 |
C4 |
C5 |
H26 |
108.8 |
109.5 |
C8 |
C6 |
C5 |
109.5 |
109.4 |
C5 |
C6 |
H8 |
107.3 |
109.4 |
C6 |
C5 |
H25 |
108.8 |
109.5 |
C6 |
C5 |
H26 |
108.7 |
109.5 |
C8 |
C6 |
H8 |
107.4 |
109.5 |
C6 |
C8 |
H12 |
109.5 |
109.5 |
C6 |
C8 |
H13 |
109.5 |
109.5 |
C6 |
C8 |
H14 |
109.5 |
109.5 |
C12 |
C10 |
H18 |
109.5 |
109.5 |
C10 |
C12 |
H19 |
109.5 |
109.5 |
C10 |
C12 |
H20 |
109.4 |
109.5 |
C10 |
C12 |
H21 |
109.5 |
109.5 |
H4 |
C3 |
H5 |
109.5 |
109.4 |
H6 |
C4 |
H7 |
109.5 |
109.5 |
H9 |
C7 |
H10 |
109.4 |
109.5 |
H9 |
C7 |
H11 |
109.5 |
109.5 |
H10 |
C7 |
H11 |
109.5 |
109.5 |
H12 |
C8 |
H13 |
109.5 |
109.5 |
H12 |
C8 |
H14 |
109.5 |
109.4 |
H13 |
C8 |
H14 |
109.4 |
109.5 |
H15 |
C9 |
H16 |
109.5 |
109.5 |
H15 |
C9 |
H17 |
109.4 |
109.5 |
H16 |
C9 |
H17 |
109.5 |
109.4 |
H19 |
C12 |
H20 |
109.5 |
109.4 |
H19 |
C12 |
H21 |
109.4 |
109.5 |
H20 |
C12 |
H21 |
109.5 |
109.5 |
H22 |
C11 |
H23 |
109.5 |
109.5 |
H22 |
C11 |
H24 |
109.5 |
109.4 |
H23 |
C11 |
H24 |
109.5 |
109.5 |
H25 |
C5 |
H26 |
109.5 |
109.4 |
Torsion Angles for 9AE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
C2 |
N1 |
C10 |
306.2 |
109.8 |
C9 |
C2 |
N1 |
H1 |
66.7 |
233.7 |
C3 |
C2 |
C9 |
H3 |
117.0 |
120.0 |
C9 |
C2 |
C3 |
H4 |
9.4 |
305.0 |
C9 |
C2 |
C3 |
H5 |
129.5 |
65.0 |
C2 |
N1 |
C10 |
C12 |
225.3 |
153.4 |
C10 |
N1 |
C2 |
H1 |
239.5 |
236.1 |
C2 |
N1 |
C10 |
H18 |
345.6 |
33.4 |
C9 |
C2 |
C3 |
H3 |
243.1 |
240.0 |
C3 |
C2 |
N1 |
C10 |
72.3 |
229.8 |
C3 |
C2 |
N1 |
H1 |
192.8 |
353.7 |
C2 |
C3 |
C4 |
C5 |
304.2 |
180.0 |
C4 |
C3 |
C2 |
H4 |
240.0 |
240.0 |
C4 |
C3 |
C2 |
H5 |
119.9 |
120.0 |
C2 |
C3 |
C4 |
H6 |
64.3 |
300.0 |
C2 |
C3 |
C4 |
H7 |
184.0 |
60.0 |
H4 |
C3 |
C2 |
H5 |
239.9 |
240.0 |
C11 |
C10 |
N1 |
H1 |
345.5 |
149.4 |
N1 |
C10 |
C11 |
H18 |
239.2 |
120.0 |
C12 |
C10 |
C11 |
H18 |
119.5 |
240.0 |
C11 |
C10 |
C12 |
H19 |
180.0 |
300.0 |
C11 |
C10 |
C12 |
H20 |
300.0 |
60.0 |
C11 |
C10 |
C12 |
H21 |
60.0 |
180.0 |
C4 |
C5 |
C6 |
C7 |
6.7 |
175.0 |
C8 |
C6 |
C7 |
C5 |
235.7 |
240.0 |
C5 |
C6 |
C7 |
H8 |
241.9 |
240.0 |
C7 |
C6 |
C5 |
H25 |
246.3 |
55.0 |
C7 |
C6 |
C5 |
H26 |
127.1 |
295.0 |
C8 |
C6 |
C7 |
H8 |
117.6 |
120.0 |
C7 |
C6 |
C8 |
H12 |
180.0 |
60.0 |
C7 |
C6 |
C8 |
H13 |
300.0 |
180.0 |
C7 |
C6 |
C8 |
H14 |
60.0 |
300.0 |
C2 |
N1 |
C10 |
H1 |
120.5 |
123.9 |
C11 |
C10 |
N1 |
H18 |
120.5 |
240.0 |
C12 |
C10 |
N1 |
H18 |
239.7 |
120.0 |
N1 |
C10 |
C12 |
H19 |
60.1 |
60.0 |
N1 |
C10 |
C12 |
H20 |
180.1 |
180.0 |
N1 |
C10 |
C12 |
H21 |
300.1 |
300.0 |
C4 |
C3 |
C2 |
H3 |
6.3 |
305.0 |
C2 |
C3 |
C4 |
H4 |
120.0 |
120.0 |
C2 |
C3 |
C4 |
H5 |
240.1 |
240.0 |
C3 |
C4 |
C5 |
C6 |
163.7 |
180.0 |
C5 |
C4 |
C3 |
H6 |
239.9 |
240.0 |
C5 |
C4 |
C3 |
H7 |
120.2 |
120.0 |
C3 |
C4 |
C5 |
H25 |
284.1 |
300.0 |
C3 |
C4 |
C5 |
H26 |
43.3 |
60.0 |
H4 |
C3 |
C4 |
H5 |
120.1 |
120.0 |
H6 |
C4 |
C3 |
H7 |
240.3 |
240.0 |
C7 |
C6 |
C5 |
C4 |
6.7 |
175.0 |
C5 |
C4 |
C3 |
H4 |
184.3 |
60.0 |
C5 |
C4 |
C3 |
H5 |
64.1 |
300.0 |
C3 |
C4 |
C5 |
H6 |
120.2 |
119.9 |
C3 |
C4 |
C5 |
H7 |
239.8 |
240.0 |
C8 |
C6 |
C5 |
C4 |
132.3 |
295.0 |
C4 |
C5 |
C6 |
H8 |
248.6 |
55.0 |
C6 |
C5 |
C4 |
H25 |
239.6 |
240.0 |
C6 |
C5 |
C4 |
H26 |
120.4 |
120.0 |
H6 |
C4 |
C5 |
H7 |
119.7 |
120.0 |
H25 |
C5 |
C4 |
H26 |
240.8 |
240.0 |
C7 |
C6 |
C5 |
C8 |
234.4 |
240.0 |
C7 |
C6 |
C5 |
H8 |
118.1 |
120.0 |
C6 |
C5 |
C4 |
H6 |
43.6 |
60.1 |
C6 |
C5 |
C4 |
H7 |
283.9 |
300.0 |
C4 |
C5 |
C6 |
H25 |
120.4 |
120.0 |
C4 |
C5 |
C6 |
H26 |
239.6 |
240.0 |
C8 |
C6 |
C5 |
H8 |
243.7 |
240.1 |
C5 |
C6 |
C8 |
H12 |
53.8 |
299.9 |
C5 |
C6 |
C8 |
H13 |
173.8 |
60.0 |
C5 |
C6 |
C8 |
H14 |
293.8 |
180.0 |
H25 |
C5 |
C6 |
H26 |
119.2 |
119.9 |
C7 |
C6 |
C8 |
C5 |
126.2 |
120.1 |
C7 |
C6 |
C8 |
H8 |
242.5 |
240.0 |
C4 |
C5 |
C6 |
C8 |
132.3 |
295.0 |
C5 |
C6 |
C8 |
H8 |
116.2 |
119.9 |
C8 |
C6 |
C5 |
H25 |
11.9 |
175.0 |
C8 |
C6 |
C5 |
H26 |
252.7 |
55.1 |
H12 |
C8 |
C6 |
H13 |
240.0 |
240.0 |
H12 |
C8 |
C6 |
H14 |
120.0 |
120.0 |
H13 |
C8 |
C6 |
H14 |
240.0 |
240.0 |
C11 |
C10 |
C12 |
H18 |
240.5 |
120.0 |
C12 |
C10 |
N1 |
H1 |
104.8 |
29.5 |
N1 |
C10 |
C12 |
H18 |
120.6 |
240.0 |
H19 |
C12 |
C10 |
H20 |
240.0 |
240.0 |
H19 |
C12 |
C10 |
H21 |
120.0 |
120.0 |
H20 |
C12 |
C10 |
H21 |
240.0 |
240.0 |
C2 |
N1 |
H1 |
C10 |
236.8 |
236.1 |
H1 |
N1 |
C10 |
C12 |
104.8 |
29.5 |
H1 |
N1 |
C10 |
H18 |
225.1 |
269.5 |
H3 |
C2 |
N1 |
C10 |
187.4 |
349.8 |
H3 |
C2 |
N1 |
H1 |
308.0 |
113.7 |
H3 |
C2 |
C3 |
C4 |
6.3 |
305.0 |
H3 |
C2 |
C3 |
H4 |
126.3 |
65.0 |
H3 |
C2 |
C3 |
H5 |
246.4 |
185.0 |
C2 |
C3 |
H4 |
C4 |
240.3 |
240.0 |
H4 |
C3 |
C2 |
H3 |
126.3 |
65.0 |
C2 |
C3 |
H4 |
H5 |
120.1 |
120.0 |
H4 |
C3 |
C4 |
C5 |
184.3 |
60.0 |
C4 |
C3 |
H4 |
H5 |
239.8 |
240.0 |
H4 |
C3 |
C4 |
H6 |
304.4 |
180.0 |
H4 |
C3 |
C4 |
H7 |
64.1 |
300.0 |
C2 |
C3 |
H5 |
C4 |
119.7 |
120.0 |
H5 |
C3 |
C2 |
H3 |
246.4 |
185.0 |
C2 |
C3 |
H5 |
H4 |
239.9 |
240.0 |
H5 |
C3 |
C4 |
C5 |
64.1 |
300.0 |
C4 |
C3 |
H5 |
H4 |
120.2 |
120.0 |
H5 |
C3 |
C4 |
H6 |
184.3 |
60.0 |
H5 |
C3 |
C4 |
H7 |
304.0 |
180.0 |
C3 |
C4 |
H6 |
C5 |
239.1 |
240.0 |
H6 |
C4 |
C3 |
H4 |
304.4 |
180.0 |
H6 |
C4 |
C3 |
H5 |
184.3 |
60.0 |
C3 |
C4 |
H6 |
H7 |
119.5 |
120.0 |
H6 |
C4 |
C5 |
C6 |
43.6 |
60.1 |
C5 |
C4 |
H6 |
H7 |
240.4 |
240.0 |
H6 |
C4 |
C5 |
H25 |
164.0 |
180.1 |
H6 |
C4 |
C5 |
H26 |
283.2 |
300.0 |
C3 |
C4 |
H7 |
C5 |
120.9 |
120.0 |
H7 |
C4 |
C3 |
H4 |
64.1 |
300.0 |
H7 |
C4 |
C3 |
H5 |
304.0 |
180.0 |
C3 |
C4 |
H7 |
H6 |
240.5 |
240.0 |
H7 |
C4 |
C5 |
C6 |
283.9 |
300.0 |
C5 |
C4 |
H7 |
H6 |
119.5 |
120.0 |
H7 |
C4 |
C5 |
H25 |
44.3 |
60.0 |
H7 |
C4 |
C5 |
H26 |
163.5 |
180.0 |
C7 |
C6 |
H8 |
C5 |
238.2 |
240.0 |
C7 |
C6 |
H8 |
C8 |
120.5 |
120.0 |
C8 |
C6 |
H8 |
C5 |
117.7 |
119.9 |
H8 |
C6 |
C5 |
H25 |
128.2 |
294.9 |
H8 |
C6 |
C5 |
H26 |
9.0 |
175.0 |
H8 |
C6 |
C8 |
H12 |
297.5 |
180.0 |
H8 |
C6 |
C8 |
H13 |
57.6 |
300.0 |
H8 |
C6 |
C8 |
H14 |
177.5 |
60.0 |
H9 |
C7 |
C6 |
C5 |
180.0 |
60.0 |
H9 |
C7 |
C6 |
C8 |
55.7 |
300.0 |
H9 |
C7 |
C6 |
H8 |
298.1 |
180.0 |
H10 |
C7 |
H9 |
H11 |
120.0 |
120.0 |
H10 |
C7 |
C6 |
C5 |
300.0 |
180.0 |
H10 |
C7 |
C6 |
C8 |
175.7 |
60.0 |
H10 |
C7 |
C6 |
H8 |
58.1 |
300.0 |
H9 |
C7 |
H10 |
H11 |
240.0 |
239.9 |
H11 |
C7 |
C6 |
C5 |
60.0 |
300.0 |
H11 |
C7 |
C6 |
C8 |
295.7 |
180.0 |
H11 |
C7 |
C6 |
H8 |
178.1 |
60.0 |
H9 |
C7 |
H11 |
H10 |
120.0 |
120.0 |
H12 |
C8 |
C6 |
C5 |
53.8 |
299.9 |
H12 |
C8 |
C6 |
H8 |
297.5 |
180.0 |
C6 |
C8 |
H12 |
H13 |
120.0 |
120.0 |
C6 |
C8 |
H12 |
H14 |
240.0 |
240.0 |
H13 |
C8 |
H12 |
H14 |
120.0 |
120.0 |
H13 |
C8 |
C6 |
C5 |
173.8 |
60.0 |
H13 |
C8 |
C6 |
H8 |
57.6 |
300.0 |
C6 |
C8 |
H13 |
H12 |
240.0 |
240.0 |
C6 |
C8 |
H13 |
H14 |
120.0 |
120.0 |
H12 |
C8 |
H13 |
H14 |
240.0 |
240.0 |
H14 |
C8 |
C6 |
C5 |
293.8 |
180.0 |
H14 |
C8 |
C6 |
H8 |
177.5 |
60.0 |
C6 |
C8 |
H14 |
H12 |
120.0 |
120.0 |
C6 |
C8 |
H14 |
H13 |
240.0 |
240.0 |
H12 |
C8 |
H14 |
H13 |
120.0 |
120.0 |
H15 |
C9 |
C2 |
H3 |
299.1 |
173.8 |
H16 |
C9 |
H15 |
H17 |
120.0 |
120.0 |
H16 |
C9 |
C2 |
H3 |
59.1 |
293.8 |
H15 |
C9 |
H16 |
H17 |
240.0 |
240.0 |
H17 |
C9 |
C2 |
H3 |
179.1 |
53.8 |
H15 |
C9 |
H17 |
H16 |
120.0 |
120.0 |
N1 |
C10 |
H18 |
C12 |
239.7 |
120.0 |
H18 |
C10 |
N1 |
H1 |
225.1 |
269.5 |
H18 |
C10 |
C12 |
H19 |
299.4 |
180.0 |
H18 |
C10 |
C12 |
H20 |
59.4 |
300.0 |
H18 |
C10 |
C12 |
H21 |
179.5 |
60.0 |
H19 |
C12 |
C10 |
H18 |
299.4 |
180.0 |
C10 |
C12 |
H19 |
H20 |
120.0 |
120.0 |
C10 |
C12 |
H19 |
H21 |
240.0 |
239.9 |
H20 |
C12 |
H19 |
H21 |
120.0 |
119.9 |
H20 |
C12 |
C10 |
H18 |
59.4 |
300.0 |
C10 |
C12 |
H20 |
H19 |
240.0 |
240.0 |
C10 |
C12 |
H20 |
H21 |
120.0 |
120.0 |
H19 |
C12 |
H20 |
H21 |
240.0 |
240.1 |
H21 |
C12 |
C10 |
H18 |
179.5 |
60.0 |
C10 |
C12 |
H21 |
H19 |
120.0 |
120.1 |
C10 |
C12 |
H21 |
H20 |
240.0 |
240.0 |
H19 |
C12 |
H21 |
H20 |
120.0 |
119.9 |
H22 |
C11 |
C10 |
H18 |
300.8 |
306.4 |
H23 |
C11 |
H22 |
H24 |
120.0 |
120.0 |
H23 |
C11 |
C10 |
H18 |
60.9 |
66.5 |
H22 |
C11 |
H23 |
H24 |
240.0 |
240.0 |
H24 |
C11 |
C10 |
H18 |
180.8 |
186.5 |
H22 |
C11 |
H24 |
H23 |
120.0 |
120.0 |
C4 |
C5 |
H25 |
C6 |
237.4 |
240.0 |
H25 |
C5 |
C4 |
H6 |
164.0 |
180.1 |
H25 |
C5 |
C4 |
H7 |
44.3 |
60.0 |
C4 |
C5 |
H25 |
H26 |
118.8 |
120.0 |
H25 |
C5 |
C6 |
H8 |
128.2 |
294.9 |
C6 |
C5 |
H25 |
H26 |
241.3 |
240.0 |
C4 |
C5 |
H26 |
C6 |
122.6 |
120.0 |
H26 |
C5 |
C4 |
H6 |
283.2 |
300.0 |
H26 |
C5 |
C4 |
H7 |
163.5 |
180.0 |
C4 |
C5 |
H26 |
H25 |
241.3 |
240.0 |
H26 |
C5 |
C6 |
H8 |
9.0 |
175.0 |
C6 |
C5 |
H26 |
H25 |
118.7 |
120.0 |