PDB Chemical Component 98J
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 98J
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O1 |
C2 |
1.224 |
1.208 |
| C2 |
C3 |
1.512 |
1.506 |
| C2 |
C9 |
1.508 |
1.507 |
| C3 |
C12 |
1.515 |
1.507 |
| C12 |
O13 |
1.261 |
1.342 |
| C12 |
O14 |
1.255 |
1.208 |
| C9 |
C10 |
1.527 |
1.530 |
| C10 |
O11 |
1.440 |
1.428 |
| C3 |
H31C |
1.100 |
1.090 |
| C3 |
H32C |
1.100 |
1.090 |
| C9 |
H91C |
1.100 |
1.090 |
| C9 |
H92C |
1.100 |
1.089 |
| O13 |
H13 |
0.950 |
0.967 |
| C10 |
H101 |
1.101 |
1.090 |
| C10 |
H102 |
1.100 |
1.090 |
| O11 |
H11 |
0.950 |
0.967 |
Bond Angles for 98J
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C2 |
C3 |
120.8 |
120.0 |
| O1 |
C2 |
C9 |
119.9 |
119.9 |
| C2 |
C3 |
H31C |
109.5 |
109.5 |
| C2 |
C3 |
H32C |
109.5 |
109.5 |
| C2 |
C9 |
C10 |
108.0 |
109.5 |
| C2 |
C9 |
H91C |
109.8 |
109.5 |
| C2 |
C9 |
H92C |
109.9 |
109.5 |
| O14 |
C12 |
O13 |
123.1 |
120.0 |
| C12 |
O13 |
H13 |
109.5 |
117.0 |
| C9 |
C10 |
O11 |
109.6 |
109.5 |
| C10 |
C9 |
H91C |
109.9 |
109.5 |
| C10 |
C9 |
H92C |
109.8 |
109.5 |
| C9 |
C10 |
H101 |
109.4 |
109.5 |
| C9 |
C10 |
H102 |
109.5 |
109.4 |
| O11 |
C10 |
H101 |
109.4 |
109.5 |
| O11 |
C10 |
H102 |
109.4 |
109.4 |
| C10 |
O11 |
H11 |
109.5 |
114.1 |
| H31C |
C3 |
H32C |
109.5 |
109.5 |
| H91C |
C9 |
H92C |
109.4 |
109.4 |
| H101 |
C10 |
H102 |
109.5 |
109.5 |
Torsion Angles for 98J
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C2 |
C3 |
H31C |
182.9 |
239.9 |
| O1 |
C2 |
C3 |
H32C |
303.0 |
120.0 |
| O1 |
C2 |
C9 |
C10 |
264.1 |
0.1 |
| O1 |
C2 |
C9 |
H91C |
23.9 |
120.1 |
| O1 |
C2 |
C9 |
H92C |
144.3 |
240.0 |
| O1 |
C2 |
C3 |
C9 |
178.4 |
179.9 |
| H31C |
C3 |
C2 |
H32C |
239.9 |
120.0 |
| O1 |
C2 |
C9 |
C3 |
181.6 |
180.1 |
| C9 |
C2 |
C3 |
H31C |
4.6 |
60.0 |
| C9 |
C2 |
C3 |
H32C |
124.7 |
300.0 |
| C2 |
C9 |
C10 |
O11 |
36.9 |
180.0 |
| C10 |
C9 |
C2 |
H91C |
240.2 |
240.0 |
| C10 |
C9 |
C2 |
H92C |
119.8 |
120.0 |
| C2 |
C9 |
C10 |
H101 |
156.9 |
300.0 |
| C2 |
C9 |
C10 |
H102 |
276.9 |
60.0 |
| H91C |
C9 |
C2 |
H92C |
239.6 |
240.0 |
| C3 |
C12 |
O13 |
H13 |
179.7 |
180.2 |
| O14 |
C12 |
O13 |
H13 |
0.0 |
0.0 |
| C2 |
C9 |
C10 |
H91C |
119.8 |
120.0 |
| C2 |
C9 |
C10 |
H92C |
240.2 |
239.9 |
| O11 |
C10 |
C9 |
H101 |
240.0 |
239.9 |
| O11 |
C10 |
C9 |
H102 |
120.0 |
120.0 |
| C9 |
C10 |
O11 |
H11 |
353.1 |
180.0 |
| H91C |
C9 |
C10 |
H92C |
120.4 |
119.9 |
| H101 |
C10 |
C9 |
H102 |
240.0 |
240.0 |
| O11 |
C10 |
C9 |
H91C |
277.1 |
59.9 |
| O11 |
C10 |
C9 |
H92C |
156.7 |
300.0 |
| C9 |
C10 |
O11 |
H101 |
120.0 |
120.0 |
| C9 |
C10 |
O11 |
H102 |
240.0 |
240.0 |
| H101 |
C10 |
O11 |
H102 |
119.9 |
120.0 |
| C2 |
C3 |
H31C |
H32C |
120.1 |
240.0 |
| C2 |
C3 |
H32C |
H31C |
239.9 |
120.0 |
| C2 |
C9 |
H91C |
C10 |
241.4 |
239.9 |
| C2 |
C9 |
H91C |
H92C |
120.7 |
120.0 |
| H91C |
C9 |
C10 |
O11 |
277.1 |
59.9 |
| C10 |
C9 |
H91C |
H92C |
239.3 |
240.0 |
| H91C |
C9 |
C10 |
H101 |
37.2 |
180.0 |
| H91C |
C9 |
C10 |
H102 |
157.1 |
300.0 |
| C2 |
C9 |
H92C |
C10 |
118.6 |
120.1 |
| C2 |
C9 |
H92C |
H91C |
239.3 |
240.0 |
| H92C |
C9 |
C10 |
O11 |
156.7 |
300.0 |
| C10 |
C9 |
H92C |
H91C |
120.7 |
120.0 |
| H92C |
C9 |
C10 |
H101 |
276.7 |
60.1 |
| H92C |
C9 |
C10 |
H102 |
36.7 |
180.0 |
| C9 |
C10 |
H101 |
O11 |
239.9 |
239.9 |
| H101 |
C10 |
C9 |
H91C |
37.2 |
180.0 |
| H101 |
C10 |
C9 |
H92C |
276.7 |
60.1 |
| C9 |
C10 |
H101 |
H102 |
120.0 |
120.0 |
| O11 |
C10 |
H101 |
H102 |
240.1 |
240.0 |
| H101 |
C10 |
O11 |
H11 |
233.1 |
60.0 |
| C9 |
C10 |
H102 |
O11 |
120.1 |
120.0 |
| H102 |
C10 |
C9 |
H91C |
157.1 |
300.0 |
| H102 |
C10 |
C9 |
H92C |
36.7 |
180.0 |
| C9 |
C10 |
H102 |
H101 |
240.0 |
240.0 |
| O11 |
C10 |
H102 |
H101 |
119.9 |
120.0 |
| H102 |
C10 |
O11 |
H11 |
113.2 |
300.0 |
| H11 |
O11 |
C10 |
H101 |
233.1 |
60.0 |
| H11 |
O11 |
C10 |
H102 |
113.2 |
300.0 |