PDB Chemical Component 954
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 954
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C1 |
1.406 |
1.376 |
| C2 |
C3 |
1.402 |
1.366 |
| C1 |
C |
1.409 |
1.337 |
| C14 |
C13 |
1.500 |
1.507 |
| N |
C4 |
1.143 |
1.136 |
| C4 |
C3 |
1.413 |
1.432 |
| C3 |
S |
1.726 |
1.758 |
| C |
S |
1.742 |
1.706 |
| C |
C5 |
1.496 |
1.507 |
| N5 |
C13 |
1.346 |
1.325 |
| N5 |
C12 |
1.347 |
1.324 |
| C13 |
C15 |
1.429 |
1.382 |
| C11 |
C5 |
1.579 |
1.548 |
| C11 |
N4 |
1.465 |
1.477 |
| C5 |
C9 |
1.546 |
1.544 |
| C5 |
N1 |
1.471 |
1.470 |
| C12 |
N4 |
1.379 |
1.385 |
| C12 |
N6 |
1.360 |
1.324 |
| N4 |
C10 |
1.461 |
1.475 |
| C15 |
F |
1.346 |
1.352 |
| C15 |
C16 |
1.378 |
1.398 |
| C9 |
C10 |
1.528 |
1.540 |
| C9 |
C8 |
1.517 |
1.495 |
| N6 |
C16 |
1.336 |
1.330 |
| C16 |
S1 |
1.757 |
1.763 |
| N1 |
C6 |
1.335 |
1.382 |
| C8 |
O |
1.218 |
1.213 |
| C8 |
N3 |
1.380 |
1.340 |
| S1 |
C17 |
1.799 |
1.810 |
| C6 |
N3 |
1.400 |
1.385 |
| C6 |
N2 |
1.310 |
1.301 |
| N3 |
C7 |
1.467 |
1.465 |
| C14 |
H1 |
1.100 |
1.089 |
| C14 |
H2 |
1.100 |
1.090 |
| C14 |
H3 |
1.101 |
1.091 |
| C17 |
H4 |
1.100 |
1.090 |
| C17 |
H5 |
1.099 |
1.090 |
| C17 |
H6 |
1.101 |
1.091 |
| C10 |
H7 |
1.100 |
1.090 |
| C10 |
H8 |
1.100 |
1.090 |
| C9 |
H9 |
1.100 |
1.090 |
| N2 |
H10 |
1.000 |
0.969 |
| C11 |
H12 |
1.100 |
1.090 |
| C11 |
H13 |
1.100 |
1.090 |
| C1 |
H14 |
1.080 |
1.081 |
| C2 |
H15 |
1.080 |
1.080 |
| C7 |
H16 |
1.100 |
1.091 |
| C7 |
H17 |
1.100 |
1.090 |
| C7 |
H18 |
1.100 |
1.091 |
| N1 |
H11 |
1.000 |
0.970 |
Bond Angles for 954
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
H14 |
123.2 |
122.4 |
| C2 |
C3 |
S |
110.9 |
109.1 |
| C3 |
C2 |
H15 |
123.5 |
123.3 |
| C1 |
C |
S |
109.8 |
110.9 |
| C |
S |
C3 |
92.9 |
91.6 |
| N5 |
C12 |
N4 |
117.6 |
119.2 |
| N5 |
C12 |
N6 |
125.2 |
121.7 |
| C13 |
C15 |
C16 |
116.7 |
118.4 |
| C5 |
C11 |
H12 |
111.0 |
110.3 |
| C5 |
C11 |
H13 |
111.0 |
110.3 |
| C5 |
C9 |
C8 |
114.6 |
111.5 |
| C5 |
C9 |
H9 |
110.6 |
110.7 |
| C5 |
N1 |
C6 |
124.5 |
117.7 |
| C5 |
N1 |
H11 |
117.7 |
121.1 |
| C12 |
N4 |
C10 |
117.5 |
111.0 |
| N4 |
C10 |
H7 |
110.8 |
109.9 |
| N4 |
C10 |
H8 |
110.9 |
109.9 |
| C15 |
C16 |
S1 |
116.3 |
120.5 |
| C9 |
C10 |
H7 |
110.9 |
109.9 |
| C9 |
C10 |
H8 |
110.8 |
110.0 |
| C9 |
C8 |
O |
120.7 |
118.1 |
| C9 |
C8 |
N3 |
117.2 |
123.8 |
| C8 |
C9 |
H9 |
111.0 |
110.1 |
| C16 |
S1 |
C17 |
102.6 |
100.0 |
| C6 |
N1 |
H11 |
117.8 |
121.2 |
| C8 |
N3 |
C7 |
116.9 |
119.7 |
| S1 |
C17 |
H4 |
109.5 |
109.5 |
| S1 |
C17 |
H5 |
109.5 |
109.5 |
| S1 |
C17 |
H6 |
109.5 |
109.4 |
| C6 |
N2 |
H10 |
112.0 |
120.0 |
| N3 |
C7 |
H16 |
109.5 |
109.5 |
| N3 |
C7 |
H17 |
109.5 |
109.5 |
| N3 |
C7 |
H18 |
109.5 |
109.5 |
| H1 |
C14 |
H2 |
109.4 |
109.5 |
| H1 |
C14 |
H3 |
109.5 |
109.5 |
| H2 |
C14 |
H3 |
109.5 |
109.5 |
| H4 |
C17 |
H5 |
109.5 |
109.5 |
| H4 |
C17 |
H6 |
109.4 |
109.5 |
| H5 |
C17 |
H6 |
109.5 |
109.4 |
| H7 |
C10 |
H8 |
109.5 |
109.9 |
| H12 |
C11 |
H13 |
109.5 |
110.4 |
| H16 |
C7 |
H17 |
109.4 |
109.4 |
| H16 |
C7 |
H18 |
109.5 |
109.4 |
| H17 |
C7 |
H18 |
109.5 |
109.5 |
Torsion Angles for 954
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C |
S |
0.1 |
0.0 |
| C3 |
C2 |
C1 |
H14 |
179.6 |
180.1 |
| C |
S |
C3 |
C2 |
359.6 |
0.0 |
| C1 |
C |
S |
C3 |
0.2 |
360.0 |
| C14 |
C13 |
C15 |
C16 |
186.1 |
180.3 |
| C4 |
C3 |
C2 |
H15 |
4.6 |
0.0 |
| S |
C3 |
C2 |
H15 |
180.6 |
180.0 |
| C2 |
C3 |
S |
C |
359.6 |
0.0 |
| C |
C5 |
C11 |
H12 |
327.3 |
85.5 |
| C |
C5 |
C11 |
H13 |
89.3 |
323.4 |
| C |
C5 |
C9 |
C8 |
279.9 |
272.3 |
| C |
C5 |
C9 |
H9 |
46.3 |
35.2 |
| C |
C5 |
N1 |
C6 |
86.9 |
72.4 |
| C |
C5 |
N1 |
H11 |
266.9 |
252.3 |
| N5 |
C13 |
C15 |
C16 |
3.6 |
0.2 |
| N5 |
C12 |
N4 |
C10 |
173.0 |
300.2 |
| C13 |
C15 |
C16 |
S1 |
174.8 |
179.8 |
| C11 |
C5 |
C9 |
C8 |
156.2 |
151.8 |
| C11 |
C5 |
C9 |
H9 |
282.6 |
274.7 |
| C11 |
C5 |
N1 |
C6 |
218.7 |
197.0 |
| C11 |
C5 |
N1 |
H11 |
38.7 |
16.9 |
| H12 |
C11 |
C5 |
H13 |
238.0 |
122.2 |
| C11 |
N4 |
C10 |
H7 |
129.7 |
117.2 |
| C11 |
N4 |
C10 |
H8 |
251.5 |
238.2 |
| C5 |
C9 |
C10 |
H7 |
208.0 |
220.7 |
| C5 |
C9 |
C10 |
H8 |
86.2 |
99.6 |
| C5 |
C9 |
C8 |
O |
159.7 |
164.3 |
| C5 |
C9 |
C8 |
N3 |
336.6 |
344.4 |
| C8 |
C9 |
C5 |
H9 |
233.6 |
237.1 |
| N1 |
C5 |
C9 |
C8 |
38.8 |
37.6 |
| N1 |
C5 |
C9 |
H9 |
165.2 |
160.5 |
| C6 |
N1 |
C5 |
H11 |
180.0 |
180.1 |
| N5 |
C12 |
N4 |
N6 |
178.8 |
179.8 |
| C12 |
N4 |
C10 |
H7 |
312.9 |
354.9 |
| C12 |
N4 |
C10 |
H8 |
74.7 |
115.9 |
| N5 |
C12 |
N6 |
N4 |
181.3 |
180.2 |
| C9 |
C10 |
N4 |
H7 |
240.9 |
240.6 |
| C9 |
C10 |
N4 |
H8 |
119.1 |
119.6 |
| H7 |
C10 |
N4 |
H8 |
238.2 |
239.0 |
| C15 |
C16 |
S1 |
C17 |
191.6 |
180.0 |
| N4 |
C10 |
C9 |
H7 |
119.1 |
119.4 |
| N4 |
C10 |
C9 |
H8 |
240.9 |
240.5 |
| H7 |
C10 |
C9 |
H8 |
121.8 |
121.1 |
| C5 |
C9 |
C8 |
H9 |
126.1 |
123.2 |
| C8 |
C9 |
C10 |
H7 |
87.1 |
101.1 |
| C8 |
C9 |
C10 |
H8 |
325.3 |
340.0 |
| C9 |
C8 |
N3 |
C7 |
177.1 |
182.2 |
| N5 |
C12 |
N6 |
C16 |
1.3 |
0.2 |
| C16 |
S1 |
C17 |
H4 |
180.0 |
300.0 |
| C16 |
S1 |
C17 |
H5 |
300.0 |
60.0 |
| C16 |
S1 |
C17 |
H6 |
60.0 |
180.0 |
| C5 |
N1 |
C6 |
H11 |
180.0 |
179.9 |
| N1 |
C6 |
N2 |
H10 |
175.3 |
180.0 |
| C9 |
C8 |
O |
N3 |
176.7 |
180.0 |
| O |
C8 |
C9 |
H9 |
33.5 |
41.1 |
| C9 |
C8 |
N3 |
O |
183.2 |
180.0 |
| N3 |
C8 |
C9 |
H9 |
210.4 |
221.1 |
| C8 |
N3 |
C7 |
H16 |
180.0 |
90.0 |
| C8 |
N3 |
C7 |
H17 |
300.0 |
210.0 |
| C8 |
N3 |
C7 |
H18 |
60.0 |
330.0 |
| H4 |
C17 |
S1 |
H5 |
240.0 |
240.0 |
| H4 |
C17 |
S1 |
H6 |
120.0 |
120.0 |
| H5 |
C17 |
S1 |
H6 |
240.0 |
240.0 |
| C6 |
N3 |
C7 |
H16 |
2.0 |
270.0 |
| C6 |
N3 |
C7 |
H17 |
122.0 |
30.0 |
| C6 |
N3 |
C7 |
H18 |
242.0 |
150.1 |
| H16 |
C7 |
N3 |
H17 |
240.0 |
240.0 |
| H16 |
C7 |
N3 |
H18 |
120.0 |
120.0 |
| H17 |
C7 |
N3 |
H18 |
240.0 |
240.0 |
| H2 |
C14 |
H1 |
H3 |
120.0 |
120.0 |
| H1 |
C14 |
H2 |
H3 |
240.0 |
240.0 |
| H1 |
C14 |
H3 |
H2 |
120.0 |
120.0 |
| S1 |
C17 |
H4 |
H5 |
120.0 |
120.1 |
| S1 |
C17 |
H4 |
H6 |
240.0 |
240.0 |
| H5 |
C17 |
H4 |
H6 |
120.0 |
120.0 |
| S1 |
C17 |
H5 |
H4 |
239.9 |
240.0 |
| S1 |
C17 |
H5 |
H6 |
120.0 |
120.0 |
| H4 |
C17 |
H5 |
H6 |
240.0 |
240.0 |
| S1 |
C17 |
H6 |
H4 |
120.0 |
120.0 |
| S1 |
C17 |
H6 |
H5 |
240.0 |
240.0 |
| H4 |
C17 |
H6 |
H5 |
120.0 |
120.0 |
| N4 |
C10 |
H7 |
H8 |
122.6 |
121.0 |
| C9 |
C10 |
H7 |
H8 |
237.4 |
238.8 |
| N4 |
C10 |
H8 |
H7 |
237.4 |
239.0 |
| C9 |
C10 |
H8 |
H7 |
122.6 |
121.1 |
| C5 |
C9 |
H9 |
C8 |
231.7 |
236.3 |
| H9 |
C9 |
C10 |
H7 |
326.5 |
339.3 |
| H9 |
C9 |
C10 |
H8 |
204.7 |
218.2 |
| H9 |
C9 |
C8 |
O |
33.5 |
41.1 |
| H9 |
C9 |
C8 |
N3 |
210.4 |
221.1 |
| C5 |
C11 |
H12 |
H13 |
122.9 |
237.9 |
| C5 |
C11 |
H13 |
H12 |
237.1 |
122.1 |
| H14 |
C1 |
C |
S |
180.1 |
180.0 |
| H15 |
C2 |
C1 |
H14 |
359.6 |
0.0 |
| H15 |
C2 |
C3 |
S |
180.6 |
180.0 |
| N3 |
C7 |
H16 |
H17 |
120.0 |
120.1 |
| N3 |
C7 |
H16 |
H18 |
240.0 |
240.0 |
| H17 |
C7 |
H16 |
H18 |
120.0 |
119.9 |
| N3 |
C7 |
H17 |
H16 |
240.0 |
239.9 |
| N3 |
C7 |
H17 |
H18 |
120.0 |
120.1 |
| H16 |
C7 |
H17 |
H18 |
240.0 |
240.1 |
| N3 |
C7 |
H18 |
H16 |
120.0 |
120.0 |
| N3 |
C7 |
H18 |
H17 |
240.0 |
239.9 |
| H16 |
C7 |
H18 |
H17 |
120.0 |
119.9 |
| C5 |
N1 |
H11 |
C6 |
180.0 |
180.1 |