PDB Chemical Component 950

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 950

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.421 1.402
C1 C6 1.419 1.392
C1 C7 1.422 1.477
C2 F2 1.408 1.351
C2 C3 1.392 1.379
C3 C4 1.366 1.389
C3 HC3 1.079 1.080
C4 C5 1.338 1.409
C4 N3 1.282 1.379
C5 C6 1.388 1.395
C5 N4 1.311 1.357
C6 HC6 1.081 1.080
C7 N1 1.317 1.332
C7 N2 1.300 1.332
N1 HH11 1.012 0.970
N1 HH12 0.997 0.970
N2 HH21 1.005 0.970
N2 HH22 0.997 0.970
N3 C8 1.298 1.370
N3 HN3 0.993 0.971
N4 C8 1.325 1.310
C8 C1' 1.409 1.478
C1' C2' 1.396 1.396
C1' C6' 1.417 1.399
C2' C3' 1.395 1.379
C2' HC2' 1.079 1.080
C3' C4' 1.375 1.384
C3' HC3' 1.079 1.080
C4' C5' 1.385 1.385
C4' HC4' 1.080 1.080
C5' C6' 1.401 1.390
C5' O5' 1.388 1.360
C6' O6' 1.378 1.359
O5' C10 1.445 1.429
C10 C20 1.613 1.530
C10 H10A 1.082 1.090
C10 H10B 1.080 1.090
C20 C30 1.555 1.530
C20 C40 1.514 1.530
C20 H20 1.082 1.090
C30 H30A 1.082 1.089
C30 H30B 1.078 1.090
C30 H30C 1.081 1.090
C40 H40A 1.081 1.090
C40 H40B 1.081 1.091
C40 H40C 1.076 1.089

Bond Angles for 950

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 118.0 120.2
C2 C1 C7 120.9 119.9
C1 C2 F2 122.9 119.9
C1 C2 C3 120.4 120.3
C6 C1 C7 121.1 119.9
C1 C6 C5 119.1 119.7
C1 C6 HC6 121.3 120.1
C1 C7 N1 122.5 120.0
C1 C7 N2 118.2 120.0
F2 C2 C3 116.7 119.9
C2 C3 C4 118.8 120.0
C2 C3 HC3 121.2 120.0
C4 C3 HC3 120.0 120.0
C3 C4 C5 122.7 120.2
C3 C4 N3 131.4 133.7
C5 C4 N3 105.8 106.1
C4 C5 C6 121.0 119.6
C4 C5 N4 112.7 107.2
C4 N3 C8 107.2 107.3
C4 N3 HN3 130.8 126.3
C6 C5 N4 126.3 133.2
C5 C6 HC6 119.6 120.2
C5 N4 C8 100.8 109.6
N1 C7 N2 119.3 120.0
C7 N1 HH11 117.6 120.1
C7 N1 HH12 127.1 120.0
C7 N2 HH21 119.7 120.0
C7 N2 HH22 122.8 120.0
HH11 N1 HH12 115.3 119.9
HH21 N2 HH22 117.3 120.0
C8 N3 HN3 122.0 126.3
N3 C8 N4 113.4 109.8
N3 C8 C1' 122.6 125.1
N4 C8 C1' 124.0 125.1
C8 C1' C2' 119.4 120.2
C8 C1' C6' 122.3 120.1
C2' C1' C6' 118.3 119.7
C1' C2' C3' 120.2 120.0
C1' C2' HC2' 120.3 120.0
C1' C6' C5' 120.7 119.7
C1' C6' O6' 121.5 120.2
C3' C2' HC2' 119.5 120.0
C2' C3' C4' 120.9 120.3
C2' C3' HC3' 119.9 119.8
C4' C3' HC3' 119.2 119.9
C3' C4' C5' 120.5 120.3
C3' C4' HC4' 119.1 119.8
C5' C4' HC4' 120.4 119.8
C4' C5' C6' 119.4 120.0
C4' C5' O5' 120.3 120.0
C6' C5' O5' 120.3 120.0
C5' C6' O6' 117.8 120.2
C5' O5' C10 125.8 106.8
O5' C10 C20 113.6 109.5
O5' C10 H10A 107.9 109.4
O5' C10 H10B 108.8 109.5
C20 C10 H10A 107.5 109.4
C20 C10 H10B 110.2 109.5
C10 C20 C30 109.8 109.5
C10 C20 C40 112.8 109.5
C10 C20 H20 110.9 109.5
H10A C10 H10B 108.8 109.5
C30 C20 C40 106.9 109.5
C30 C20 H20 108.1 109.4
C20 C30 H30A 110.8 109.5
C20 C30 H30B 110.4 109.5
C20 C30 H30C 109.8 109.4
C40 C20 H20 108.2 109.5
C20 C40 H40A 111.1 109.4
C20 C40 H40B 109.7 109.5
C20 C40 H40C 109.5 109.5
H30A C30 H30B 108.5 109.5
H30A C30 H30C 108.7 109.5
H30B C30 H30C 108.6 109.5
H40A C40 H40B 108.7 109.4
H40A C40 H40C 109.3 109.5
H40B C40 H40C 108.5 109.5

Torsion Angles for 950

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 179.9 180.0
C2 C1 C6 C5 359.8 360.0
C2 C1 C6 HC6 179.9 180.0
C2 C1 C7 N1 200.6 235.9
C2 C1 C7 N2 21.7 55.9
F2 C2 C1 C3 181.4 180.0
C1 C2 C3 C4 359.7 360.0
C1 C2 C3 HC3 180.1 180.0
C2 C1 C6 C7 180.1 180.0
C6 C1 C2 F2 181.7 180.0
C6 C1 C2 C3 0.3 0.0
C6 C1 C7 N1 20.6 55.9
C6 C1 C7 N2 201.8 235.9
C4 C5 C6 C1 0.1 0.0
C1 C6 C5 N4 180.2 180.3
C5 C6 C1 HC6 179.9 180.0
C2 C1 C7 C6 179.9 180.0
C7 C1 C2 F2 1.7 0.0
C7 C1 C2 C3 180.4 180.0
C7 C1 C6 C5 179.7 180.0
C7 C1 C6 HC6 359.8 0.0
N1 C7 C1 N2 178.9 180.0
C1 C7 N1 HH11 356.0 360.0
C1 C7 N1 HH12 179.6 180.0
C1 C7 N2 HH21 5.2 185.2
C1 C7 N2 HH22 180.2 5.1
F2 C2 C1 C6 181.7 180.0
F2 C2 C1 C7 1.7 0.0
C1 C2 F2 C3 178.7 180.0
F2 C2 C3 C4 178.4 180.0
F2 C2 C3 HC3 358.8 0.0
C3 C2 C1 C6 0.3 0.0
C3 C2 C1 C7 180.4 180.0
C1 C2 C3 F2 181.3 180.0
C4 C3 C2 HC3 179.7 180.0
C2 C3 C4 C5 0.1 0.0
C2 C3 C4 N3 179.7 180.0
C2 C3 C4 HC3 180.3 180.0
C5 C4 C3 N3 180.5 180.0
C3 C4 C5 C6 360.0 360.0
C3 C4 C5 N4 179.9 179.8
C3 C4 N3 C8 180.3 180.0
C3 C4 N3 HN3 359.9 0.0
C2 C3 HC3 C4 179.7 180.0
HC3 C3 C4 C5 179.8 180.0
HC3 C3 C4 N3 359.3 360.0
C1 C6 C5 C4 0.1 0.0
C5 C4 C3 HC3 179.8 180.0
C3 C4 C5 N3 179.6 180.0
C5 C4 N3 C8 359.9 360.0
C5 C4 N3 HN3 179.5 180.0
C6 C5 C4 N4 180.1 180.2
C4 C5 C6 HC6 180.0 180.0
C4 C5 N4 C8 359.8 0.4
N3 C4 C3 HC3 359.3 360.0
C3 C4 N3 C5 180.4 180.0
N3 C4 C5 C6 180.3 180.0
N3 C4 C5 N4 0.2 359.8
C8 N3 C4 HN3 180.4 180.0
C4 N3 C8 N4 0.0 0.3
C4 N3 C8 C1' 181.5 180.0
C5 C6 C1 C7 179.7 180.0
C1 C6 C5 HC6 180.1 180.0
C6 C5 C4 N3 180.3 180.0
C4 C5 C6 N4 179.9 179.7
C6 C5 N4 C8 179.7 180.1
N4 C5 C4 N3 0.2 359.8
C4 C5 N4 C6 180.1 180.2
N4 C5 C6 HC6 0.1 0.3
N3 C8 N4 C5 0.1 359.6
C5 N4 C8 C1' 178.6 179.9
HC6 C6 C1 C7 359.8 0.0
C1 C6 HC6 C5 179.9 180.0
HC6 C6 C5 N4 0.1 0.3
C1 C7 N1 N2 181.2 180.0
N1 C7 N2 HH21 186.3 5.2
N1 C7 N2 HH22 1.3 185.1
HH11 N1 C7 HH12 176.4 180.0
C1 C7 N2 N1 178.9 180.0
N2 C7 N1 HH11 174.8 179.9
N2 C7 N1 HH12 358.4 360.0
HH21 N2 C7 HH22 185.0 180.1
HH11 N1 C7 N2 174.8 179.9
C7 N1 HH11 HH12 183.2 180.0
HH12 N1 C7 N2 358.4 360.0
C7 N1 HH12 HH11 176.5 180.0
C7 N2 HH21 HH22 175.3 179.9
C7 N2 HH22 HH21 184.9 180.1
C4 N3 C8 HN3 179.7 180.0
C5 N4 C8 N3 0.1 359.6
N4 C8 N3 C1' 178.5 180.3
N3 C8 C1' C2' 176.7 40.0
N3 C8 C1' C6' 356.8 220.2
C4 N3 HN3 C8 180.4 180.0
HN3 N3 C8 N4 180.3 180.3
HN3 N3 C8 C1' 1.8 0.0
N4 C8 N3 HN3 180.3 180.3
N3 C8 N4 C1' 181.5 179.7
N4 C8 C1' C2' 358.3 219.7
N4 C8 C1' C6' 178.4 39.9
C1' C8 N3 HN3 1.8 0.0
N3 C8 C1' N4 178.4 180.3
C2' C1' C8 C6' 179.9 179.9
C8 C1' C2' C3' 180.0 180.0
C8 C1' C2' HC2' 0.3 359.9
C8 C1' C6' C5' 180.2 180.3
C8 C1' C6' O6' 1.7 359.9
C8 C1' C2' C6' 180.1 180.1
C2' C1' C6' C5' 0.3 0.4
C2' C1' C6' O6' 181.7 180.0
C3' C2' C1' HC2' 179.8 180.1
C1' C2' C3' C4' 359.9 359.9
C1' C2' C3' HC3' 179.9 180.0
C8 C1' C6' C2' 179.9 179.9
C6' C1' C2' C3' 360.0 359.8
C6' C1' C2' HC2' 180.2 179.8
C4' C5' C6' C1' 359.6 359.5
C1' C6' C5' O5' 177.5 179.8
C5' C6' C1' O6' 178.5 180.4
C3' C2' C1' C6' 360.0 359.8
C1' C2' C3' HC2' 180.2 179.9
C4' C3' C2' HC3' 179.9 179.9
C2' C3' C4' C5' 0.0 0.0
C2' C3' C4' HC4' 179.9 180.0
HC2' C2' C1' C6' 180.2 179.8
C1' C2' HC2' C3' 179.8 180.1
HC2' C2' C3' C4' 179.7 180.0
HC2' C2' C3' HC3' 359.7 0.0
C4' C3' C2' HC2' 179.7 180.0
C2' C3' C4' HC3' 180.1 180.1
C5' C4' C3' HC4' 180.2 180.0
C3' C4' C5' C6' 0.2 0.3
C3' C4' C5' O5' 182.3 180.0
HC3' C3' C2' HC2' 359.7 0.0
C2' C3' HC3' C4' 179.9 179.9
HC3' C3' C4' C5' 180.0 180.0
HC3' C3' C4' HC4' 359.8 360.0
C1' C6' C5' C4' 359.6 359.5
C5' C4' C3' HC3' 180.0 180.0
C3' C4' C5' HC4' 179.8 180.0
C6' C5' C4' O5' 177.9 180.3
C4' C5' C6' O6' 178.2 179.9
C4' C5' O5' C10 11.4 0.0
HC4' C4' C3' HC3' 359.8 360.0
C3' C4' HC4' C5' 180.2 180.0
HC4' C4' C5' C6' 180.4 180.2
HC4' C4' C5' O5' 2.5 359.9
C1' C6' C5' O6' 181.4 179.6
C6' C5' C4' HC4' 180.4 180.2
C4' C5' C6' O5' 182.1 179.7
C6' C5' O5' C10 193.5 179.7
O5' C5' C4' HC4' 2.5 359.9
C4' C5' O5' C6' 177.9 180.3
O5' C5' C6' O6' 356.1 0.2
C5' O5' C10 C20 163.1 180.0
C5' O5' C10 H10A 282.1 60.0
C5' O5' C10 H10B 40.0 300.0
C1' C6' O6' C5' 178.6 180.4
O6' C6' C5' O5' 356.1 0.2
C20 C10 O5' H10A 241.0 119.9
C20 C10 O5' H10B 123.1 240.0
O5' C10 C20 C30 222.6 65.0
O5' C10 C20 C40 341.7 185.0
O5' C10 C20 H20 103.2 305.0
H10A C10 O5' H10B 242.1 120.1
O5' C10 C20 H10A 119.3 240.1
O5' C10 C20 H10B 237.7 120.0
H10A C10 C20 H10B 118.4 240.0
C30 C20 C10 C40 240.9 240.0
C30 C20 C10 H20 119.4 119.9
C10 C20 C30 H30A 186.4 180.0
C10 C20 C30 H30B 306.7 300.0
C10 C20 C30 H30C 66.4 60.0
C40 C20 C10 H20 238.5 240.0
C10 C20 C40 H40A 74.6 300.1
C10 C20 C40 H40B 194.8 59.9
C10 C20 C40 H40C 313.8 180.0
O5' C10 H10A C20 237.2 119.9
O5' C10 H10A H10B 117.9 240.0
C20 C10 H10A H10B 240.7 120.0
H10A C10 C20 C30 103.3 184.9
H10A C10 C20 C40 222.4 305.0
H10A C10 C20 H20 343.9 65.0
O5' C10 H10B C20 125.1 240.0
O5' C10 H10B H10A 242.7 120.0
C20 C10 H10B H10A 117.6 240.0
H10B C10 C20 C30 344.9 304.9
H10B C10 C20 C40 104.0 65.0
H10B C10 C20 H20 225.5 185.0
C30 C20 C10 H10A 103.3 184.9
C30 C20 C10 H10B 344.9 304.9
C10 C20 C30 C40 122.6 120.1
C10 C20 C30 H20 238.9 240.0
C40 C20 C30 H20 116.2 120.0
C30 C20 C40 H40A 195.4 60.1
C30 C20 C40 H40B 315.6 180.0
C30 C20 C40 H40C 74.6 300.1
H30A C30 C20 H30B 239.8 240.0
H30A C30 C20 H30C 120.0 120.0
H30B C30 C20 H30C 240.3 240.0
C40 C20 C10 H10A 222.4 305.0
C40 C20 C10 H10B 104.0 65.0
C10 C20 C40 C30 239.2 240.0
C10 C20 C40 H20 123.1 120.0
C30 C20 C40 H20 243.8 240.1
C40 C20 C30 H30A 63.8 59.9
C40 C20 C30 H30B 184.0 180.0
C40 C20 C30 H30C 303.8 300.0
H40A C40 C20 H40B 239.8 240.1
H40A C40 C20 H40C 120.8 120.0
H40B C40 C20 H40C 241.0 239.9
H20 C20 C10 H10A 343.9 65.0
H20 C20 C10 H10B 225.5 185.0
C10 C20 H20 C30 120.4 120.0
C10 C20 H20 C40 235.8 240.0
C30 C20 H20 C40 115.4 120.0
H20 C20 C30 H30A 307.6 300.0
H20 C20 C30 H30B 67.8 60.0
H20 C20 C30 H30C 187.5 180.0
H20 C20 C40 H40A 311.6 180.0
H20 C20 C40 H40B 71.8 299.9
H20 C20 C40 H40C 190.7 60.0
H30A C30 C20 C40 63.8 59.9
H30A C30 C20 H20 307.6 300.0
C20 C30 H30A H30B 121.4 120.1
C20 C30 H30A H30C 239.3 240.1
H30B C30 H30A H30C 117.9 120.0
H30B C30 C20 C40 184.0 180.0
H30B C30 C20 H20 67.8 60.0
C20 C30 H30B H30A 238.4 240.0
C20 C30 H30B H30C 120.4 120.0
H30A C30 H30B H30C 242.1 240.0
H30C C30 C20 C40 303.8 300.0
H30C C30 C20 H20 187.5 180.0
C20 C30 H30C H30A 121.3 120.0
C20 C30 H30C H30B 239.1 240.0
H30A C30 H30C H30B 117.8 120.0
H40A C40 C20 H20 311.6 180.0
C20 C40 H40A H40B 120.8 119.9
C20 C40 H40A H40C 239.0 240.0
H40B C40 H40A H40C 118.2 120.1
H40B C40 C20 H20 71.8 299.9
C20 C40 H40B H40A 238.3 240.1
C20 C40 H40B H40C 119.6 120.1
H40A C40 H40B H40C 241.3 240.0
H40C C40 C20 H20 190.7 60.0
C20 C40 H40C H40A 121.9 120.0
C20 C40 H40C H40B 240.2 240.0
H40A C40 H40C H40B 118.3 120.0