PDB Chemical Component 93A

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 93A

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O21 S16 1.621 1.421
S16 O20 1.556 1.421
S16 N17 1.720 1.657
S16 N15 1.623 1.667
N17 C18 1.334 1.350
N17 H17 1.000 0.970
C18 O19 1.223 1.217
C18 C13 1.517 1.462
C13 N12 1.390 1.352
C13 C14 1.377 1.395
N12 C11 1.408 1.303
C11 N10 1.350 1.368
C11 H11 1.080 1.081
N15 C14 1.375 1.383
N15 H15 1.000 0.970
C14 N10 1.329 1.349
N10 C5 1.461 1.465
C5 O1 1.436 1.444
C5 C4 1.491 1.545
C5 H5 1.100 1.090
O1 C2 1.394 1.446
C4 O7 1.450 1.429
C4 C3 1.507 1.545
C4 H4 1.100 1.090
O7 HO7 0.950 0.967
C3 O6 1.437 1.429
C3 C2 1.516 1.545
C3 H3 1.100 1.090
O6 HO6 0.950 0.967
C2 C5' 1.452 1.530
C2 H2 1.100 1.090
C5' O5' 1.323 1.429
C5' H5'1 1.100 1.090
C5' H5'2 1.100 1.090
O5' P 1.551 1.610
P O1P 1.647 1.481
P O2P 1.689 1.610
P O3P 1.559 1.610
O2P H2P 0.950 0.967
O3P H3P 0.951 0.966

Bond Angles for 93A

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O21 S16 O20 98.1 125.4
O21 S16 N17 105.6 105.9
O21 S16 N15 108.3 105.8
O20 S16 N17 117.5 105.8
O20 S16 N15 115.8 105.9
N17 S16 N15 110.0 106.8
S16 N17 C18 123.5 120.9
S16 N17 H17 118.3 119.6
S16 N15 C14 118.3 116.2
S16 N15 H15 106.6 122.0
C18 N17 H17 118.3 119.6
N17 C18 O19 125.2 120.1
N17 C18 C13 117.4 119.8
O19 C18 C13 117.4 120.1
C18 C13 N12 120.6 129.5
C18 C13 C14 123.7 123.5
N12 C13 C14 115.6 107.0
C13 N12 C11 93.2 109.1
C13 C14 N15 126.7 122.0
C13 C14 N10 108.7 106.9
N12 C11 N10 121.3 109.6
N12 C11 H11 119.4 125.2
N10 C11 H11 119.3 125.2
C11 N10 C14 101.2 107.4
C11 N10 C5 132.5 126.3
C14 N15 H15 106.6 121.8
N15 C14 N10 124.7 131.1
C14 N10 C5 126.3 126.3
N10 C5 O1 106.4 110.5
N10 C5 C4 112.4 110.3
N10 C5 H5 109.1 110.4
O1 C5 C4 108.0 104.8
O1 C5 H5 113.4 110.4
C5 O1 C2 105.1 105.4
C4 C5 H5 107.6 110.3
C5 C4 O7 108.7 110.6
C5 C4 C3 102.0 104.0
C5 C4 H4 116.2 110.5
O1 C2 C3 110.9 104.7
O1 C2 C5' 109.2 110.4
O1 C2 H2 106.9 110.4
O7 C4 C3 113.6 110.5
O7 C4 H4 105.1 110.5
C4 O7 HO7 109.5 106.8
C3 C4 H4 111.5 110.5
C4 C3 O6 110.4 110.5
C4 C3 C2 103.1 104.2
C4 C3 H3 111.4 110.5
O6 C3 C2 104.2 110.5
O6 C3 H3 110.4 110.5
C3 O6 HO6 109.5 106.8
C2 C3 H3 116.9 110.5
C3 C2 C5' 103.5 110.7
C3 C2 H2 112.4 110.3
C5' C2 H2 113.9 110.3
C2 C5' O5' 137.2 109.5
C2 C5' H5'1 94.9 109.5
C2 C5' H5'2 101.1 109.4
O5' C5' H5'1 94.9 109.5
O5' C5' H5'2 101.1 109.5
C5' O5' P 159.2 106.8
H5'1 C5' H5'2 134.8 109.5
O5' P O1P 108.1 109.5
O5' P O2P 109.4 109.5
O5' P O3P 95.8 109.5
O1P P O2P 109.9 109.5
O1P P O3P 118.9 109.5
O2P P O3P 113.6 109.5
P O2P H2P 109.5 106.8
P O3P H3P 109.5 106.8

Torsion Angles for 93A

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O20 S16 O21 N17 121.6 236.6
O20 S16 O21 N15 239.4 123.4
N17 S16 O21 N15 117.8 246.8
O21 S16 N17 C18 251.1 85.0
O21 S16 N17 H17 71.1 265.0
O21 S16 N15 C14 108.1 284.1
O21 S16 N15 H15 228.0 104.3
O21 S16 O20 N17 247.7 123.4
O21 S16 O20 N15 114.8 236.6
N17 S16 O20 N15 227.2 113.2
O20 S16 N17 C18 143.1 220.0
O20 S16 N17 H17 323.1 40.1
O20 S16 N15 C14 217.0 149.1
O20 S16 N15 H15 336.9 329.3
O21 S16 N17 O20 108.1 225.0
O21 S16 N17 N15 243.4 112.4
O20 S16 N17 N15 135.3 247.5
N17 S16 N15 C14 353.1 36.6
N17 S16 N15 H15 113.1 216.8
C18 N17 S16 H17 180.0 180.0
S16 N17 C18 O19 175.6 185.3
S16 N17 C18 C13 355.1 5.3
O21 S16 N15 O20 251.1 135.0
O21 S16 N15 N17 114.9 247.5
O20 S16 N15 N17 223.8 112.5
N15 S16 N17 C18 7.7 332.5
N15 S16 N17 H17 187.8 152.6
C13 C14 N15 S16 4.2 335.0
C14 N15 S16 H15 240.0 179.8
S16 N15 C14 N10 183.6 153.9
C18 N17 S16 N15 7.7 332.5
S16 N17 C18 H17 180.0 180.0
O19 C18 N17 C13 180.5 180.0
N17 C18 C13 N12 181.4 191.9
N17 C18 C13 C14 0.9 12.5
H17 N17 S16 N15 187.8 152.6
S16 N17 H17 C18 180.0 180.0
H17 N17 C18 O19 355.5 5.2
H17 N17 C18 C13 175.1 185.2
O19 C18 N17 H17 355.5 5.2
N17 C18 O19 C13 179.5 180.0
O19 C18 C13 N12 1.0 11.9
O19 C18 C13 C14 180.5 192.5
C13 C18 N17 H17 175.1 185.2
N17 C18 C13 O19 180.4 180.0
N12 C13 C18 C14 180.5 179.3
C18 C13 N12 C11 179.8 180.7
C18 C13 C14 N15 359.4 358.6
C18 C13 C14 N10 180.0 179.4
C18 C13 N12 C14 179.6 180.6
N12 C13 C14 N15 179.0 179.1
N12 C13 C14 N10 359.5 359.9
C13 N12 C11 N10 0.1 359.9
C13 N12 C11 H11 180.2 180.0
S16 N15 C14 C13 4.2 335.0
C18 C13 C14 N12 180.4 179.5
C14 C13 N12 C11 0.2 0.1
C11 N10 C14 C13 0.5 0.0
C13 C14 N15 H15 244.2 154.8
N15 C14 C13 N10 179.5 179.2
C13 C14 N10 C5 179.1 180.3
C11 N12 C13 C14 0.2 0.1
N10 C11 N12 H11 180.0 180.0
N12 C11 N10 C14 359.6 0.0
N12 C11 N10 C5 181.1 179.8
C13 C14 N10 C11 0.5 0.0
N12 C11 N10 H11 180.0 180.0
N15 C14 N10 C11 181.0 181.0
C14 N10 C11 C5 178.5 180.2
C11 N10 C5 O1 97.4 20.4
C11 N10 C5 C4 339.4 265.0
C11 N10 C5 H5 220.2 142.8
N12 C11 H11 N10 180.0 180.0
H11 C11 N10 C14 179.6 180.0
H11 C11 N10 C5 1.1 359.7
S16 N15 C14 H15 120.0 180.2
C13 C14 N15 N10 180.6 181.1
C11 N10 C14 N15 181.0 181.0
N15 C14 N10 C5 359.6 1.2
S16 N15 H15 C14 232.8 179.8
H15 N15 C14 N10 63.6 333.7
C13 C14 N10 N15 179.5 179.1
C14 N10 C11 H11 179.6 180.0
C11 N10 C14 C5 181.4 179.8
N10 C14 N15 H15 63.6 333.7
C14 N10 C5 O1 279.2 200.1
C14 N10 C5 C4 161.3 84.7
C14 N10 C5 H5 42.0 322.5
C5 N10 C11 H11 1.1 359.7
C11 N10 C5 C14 178.2 180.3
O1 C5 N10 C4 118.0 115.4
O1 C5 N10 H5 237.2 237.6
N10 C5 O1 C2 209.7 200.7
C4 C5 N10 H5 119.2 122.2
N10 C5 C4 O7 271.2 261.6
N10 C5 C4 C3 151.0 142.9
N10 C5 C4 H4 29.5 24.3
N10 C5 O1 C4 239.2 241.2
N10 C5 O1 H5 120.0 122.4
C4 C5 O1 H5 240.9 241.2
O1 C5 C4 O7 154.2 142.7
O1 C5 C4 C3 33.9 24.0
O1 C5 C4 H4 272.5 265.4
C5 O1 C2 C3 12.8 40.4
C5 O1 C2 C5' 126.2 159.5
C5 O1 C2 H2 249.9 281.7
N10 C5 C4 O1 117.0 119.0
N10 C5 C4 H5 239.8 237.8
O1 C5 C4 H5 122.8 118.8
C4 C5 O1 C2 330.6 319.5
O7 C4 C5 C3 120.3 118.7
O7 C4 C5 H4 241.7 237.3
C5 C4 O7 HO7 240.8 183.9
C3 C4 C5 H4 121.4 118.6
C5 C4 C3 O6 86.5 118.6
C5 C4 C3 C2 335.7 359.9
C5 C4 C3 H3 209.5 241.2
N10 C5 H5 O1 241.5 237.6
N10 C5 H5 C4 122.2 122.2
O1 C5 H5 C4 240.6 244.6
H5 C5 O1 C2 89.7 78.4
H5 C5 C4 O7 31.4 23.8
H5 C5 C4 C3 271.1 265.2
H5 C5 C4 H4 149.7 146.5
C2 O1 C5 C4 330.6 319.5
C2 O1 C5 H5 89.7 78.4
C4 C3 C2 O1 8.0 336.2
O6 C3 C2 O1 252.6 217.5
O1 C2 C3 H3 130.6 94.9
C3 C2 O1 C5' 246.6 240.9
C3 C2 O1 H2 122.9 118.7
C5' C2 O1 H2 236.3 237.8
O1 C2 C5' O5' 52.1 66.4
O1 C2 C5' H5'1 309.6 186.5
O1 C2 C5' H5'2 172.1 306.5
O7 C4 C5 H5 31.4 23.8
C5 C4 O7 C3 247.2 245.3
C5 C4 O7 H4 125.1 122.7
C3 C4 O7 H4 237.9 237.4
O7 C4 C3 O6 329.8 359.9
O7 C4 C3 C2 218.9 241.1
O7 C4 C3 H3 92.8 122.4
C3 C4 C5 H5 271.1 265.2
C5 C4 C3 O7 116.8 118.8
C5 C4 C3 H4 235.3 241.4
O1 C2 C3 C4 8.0 336.2
O7 C4 C3 H4 118.6 122.6
C3 C4 O7 HO7 353.6 298.6
O6 C3 C4 C2 110.8 118.7
O6 C3 C4 H3 237.0 237.4
C4 C3 O6 HO6 256.7 63.3
C2 C3 C4 H3 126.2 118.7
C4 C3 C2 C5' 251.0 217.3
C4 C3 C2 H2 127.6 94.9
H4 C4 C5 H5 149.7 146.5
C5 C4 H4 O7 239.8 237.2
C5 C4 H4 C3 116.3 114.6
O7 C4 H4 C3 236.5 237.4
H4 C4 O7 HO7 115.8 61.1
H4 C4 C3 O6 211.2 237.3
H4 C4 C3 C2 100.4 118.6
H4 C4 C3 H3 334.2 359.9
HO7 O7 C4 C3 353.6 298.6
HO7 O7 C4 H4 115.8 61.1
O1 C2 C3 O6 252.6 217.5
O6 C3 C4 H4 211.2 237.3
C4 C3 O6 C2 249.9 245.2
C4 C3 O6 H3 123.6 122.6
C2 C3 O6 H3 233.7 237.4
O6 C3 C2 C5' 135.6 98.5
O6 C3 C2 H2 12.3 336.2
O1 C2 C3 C5' 117.0 119.0
O1 C2 C3 H2 240.4 241.3
C2 C3 C4 H4 100.4 118.6
C4 C3 C2 O6 115.4 118.7
C4 C3 C2 H3 237.4 241.3
O6 C3 C2 H3 122.1 122.6
C2 C3 O6 HO6 6.8 178.1
C5' C2 C3 H2 123.4 122.3
C3 C2 C5' O5' 170.3 181.9
C3 C2 C5' H5'1 67.7 301.9
C3 C2 C5' H5'2 290.3 61.9
H3 C3 C4 H4 334.2 359.9
C4 C3 H3 O6 237.0 237.4
C4 C3 H3 C2 118.1 114.8
O6 C3 H3 C2 241.1 237.4
H3 C3 O6 HO6 133.1 300.7
H3 C3 C2 C5' 13.5 335.9
H3 C3 C2 H2 250.2 213.6
HO6 O6 C3 C2 6.8 178.1
HO6 O6 C3 H3 133.1 300.7
O1 C2 C5' C3 241.8 244.5
O1 C2 C5' H2 119.5 122.2
C5' C2 C3 H3 13.5 335.9
C3 C2 C5' H2 237.7 237.7
O5' C5' C2 H5'1 102.5 240.0
O5' C5' C2 H5'2 240.0 120.0
C2 C5' O5' P 143.6 180.0
H5'1 C5' C2 H5'2 137.5 240.0
O1 C2 H2 C3 121.9 115.2
O1 C2 H2 C5' 239.2 237.7
H2 C2 C3 H3 250.2 213.6
C3 C2 H2 C5' 117.3 122.5
H2 C2 C5' O5' 292.6 304.2
H2 C2 C5' H5'1 190.1 64.2
H2 C2 C5' H5'2 52.6 184.2
O5' C5' C2 H2 292.6 304.2
C2 C5' O5' H5'1 257.5 120.0
C2 C5' O5' H5'2 120.0 240.1
H5'1 C5' O5' H5'2 222.5 120.0
C5' O5' P O1P 192.6 55.0
C5' O5' P O2P 312.2 175.0
C5' O5' P O3P 69.7 295.0
H5'1 C5' C2 H2 190.1 64.2
C2 C5' H5'1 O5' 138.3 240.0
C2 C5' H5'1 H5'2 249.2 119.9
O5' C5' H5'1 H5'2 110.9 240.0
H5'1 C5' O5' P 246.1 60.0
H5'2 C5' C2 H2 52.6 184.2
C2 C5' H5'2 O5' 216.8 120.0
C2 C5' H5'2 H5'1 108.4 240.0
O5' C5' H5'2 H5'1 251.6 120.0
H5'2 C5' O5' P 23.6 300.0
P O5' C5' H5'1 246.1 60.0
P O5' C5' H5'2 23.6 300.0
O1P P O5' O2P 240.4 240.0
O1P P O5' O3P 122.9 120.0
O2P P O5' O3P 242.5 240.0
O5' P O2P H2P 168.3 180.0
O5' P O3P H3P 322.8 300.0
O5' P O1P O2P 119.3 120.0
O5' P O1P O3P 252.5 240.0
O2P P O1P O3P 133.2 120.0
O1P P O2P H2P 286.8 300.0
O1P P O3P H3P 208.5 180.0
O5' P O2P O1P 241.5 240.0
O5' P O2P O3P 105.6 120.0
O1P P O2P O3P 224.1 240.0
O2P P O3P H3P 76.8 60.0
O5' P O3P O1P 114.3 120.0
O5' P O3P O2P 246.0 240.0
O1P P O3P O2P 131.6 120.0
O3P P O2P H2P 62.6 60.0
H2P O2P P O3P 62.6 60.0