PDB Chemical Component 8Z8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8Z8
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CBB |
NBC |
1.329 |
1.327 |
| CBB |
NBA |
1.316 |
1.311 |
| NBC |
CAD |
1.376 |
1.329 |
| NBA |
NAC |
1.347 |
1.401 |
| CAY |
CAZ |
1.363 |
1.543 |
| CAY |
CAK |
1.511 |
1.546 |
| CAD |
NAC |
1.286 |
1.366 |
| CAD |
NAE |
1.343 |
1.339 |
| NAC |
CAB |
1.366 |
1.364 |
| CAZ |
CAU |
1.505 |
1.546 |
| CAK |
NAH |
1.364 |
1.483 |
| CAK |
CAJ |
1.500 |
1.537 |
| NAE |
CAF |
1.330 |
1.316 |
| CAB |
NAH |
1.416 |
1.375 |
| CAB |
CAA |
1.420 |
1.392 |
| NAH |
CAU |
1.365 |
1.484 |
| CAJ |
CAI |
1.538 |
1.532 |
| OAW |
CAI |
1.290 |
1.429 |
| OAW |
CAX |
1.397 |
1.428 |
| CAU |
CAV |
1.506 |
1.537 |
| CAF |
CAA |
1.404 |
1.404 |
| CAF |
CL1 |
1.695 |
1.737 |
| CAA |
CAL |
1.511 |
1.484 |
| CAI |
CAV |
1.535 |
1.532 |
| FAT |
CAQ |
1.303 |
1.351 |
| CAL |
CAQ |
1.388 |
1.395 |
| CAL |
CAM |
1.398 |
1.396 |
| CAQ |
CAP |
1.385 |
1.382 |
| FAS |
CAM |
1.307 |
1.352 |
| CAM |
CAN |
1.385 |
1.382 |
| CAP |
CAO |
1.389 |
1.384 |
| CAN |
CAO |
1.392 |
1.385 |
| CAO |
FAR |
1.310 |
1.352 |
| CAI |
H1 |
1.100 |
1.090 |
| CAJ |
H2 |
1.100 |
1.089 |
| CAJ |
H3 |
1.100 |
1.090 |
| CAK |
H4 |
1.100 |
1.091 |
| CAN |
H5 |
1.080 |
1.081 |
| CAP |
H6 |
1.080 |
1.080 |
| CAU |
H7 |
1.100 |
1.090 |
| CAV |
H8 |
1.100 |
1.090 |
| CAV |
H9 |
1.100 |
1.090 |
| CAX |
H10 |
1.099 |
1.091 |
| CAX |
H11 |
1.100 |
1.090 |
| CAX |
H12 |
1.100 |
1.090 |
| CAY |
H13 |
1.100 |
1.090 |
| CAY |
H14 |
1.100 |
1.090 |
| CAZ |
H15 |
1.100 |
1.090 |
| CAZ |
H16 |
1.100 |
1.089 |
| CBB |
H17 |
1.079 |
1.080 |
Bond Angles for 8Z8
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NBA |
CBB |
NBC |
107.6 |
109.6 |
| NBC |
CBB |
H17 |
126.2 |
125.2 |
| CBB |
NBA |
NAC |
108.9 |
107.0 |
| NBA |
CBB |
H17 |
126.2 |
125.1 |
| CAZ |
CAY |
H13 |
110.2 |
110.4 |
| CAZ |
CAY |
H14 |
110.1 |
110.4 |
| CAY |
CAZ |
H15 |
110.2 |
110.4 |
| CAY |
CAZ |
H16 |
110.2 |
110.4 |
| CAY |
CAK |
NAH |
97.8 |
104.3 |
| CAY |
CAK |
H4 |
111.1 |
112.7 |
| NAC |
CAD |
NAE |
122.9 |
120.7 |
| CAD |
NAE |
CAF |
120.5 |
121.3 |
| NAC |
CAB |
NAH |
117.8 |
120.7 |
| CAZ |
CAU |
H7 |
111.2 |
112.7 |
| CAB |
NAH |
CAK |
124.6 |
128.3 |
| CAK |
NAH |
CAU |
109.0 |
103.5 |
| NAH |
CAK |
H4 |
113.5 |
112.2 |
| CAK |
CAJ |
H2 |
109.5 |
109.6 |
| CAK |
CAJ |
H3 |
109.5 |
109.7 |
| NAE |
CAF |
CL1 |
121.2 |
119.8 |
| CAB |
NAH |
CAU |
124.8 |
128.2 |
| CAB |
CAA |
CAL |
124.0 |
120.6 |
| NAH |
CAU |
H7 |
113.4 |
112.2 |
| CAJ |
CAI |
CAV |
116.7 |
109.7 |
| CAJ |
CAI |
H1 |
108.2 |
109.4 |
| OAW |
CAI |
H1 |
111.9 |
109.5 |
| OAW |
CAX |
H10 |
109.5 |
109.5 |
| OAW |
CAX |
H11 |
109.5 |
109.5 |
| OAW |
CAX |
H12 |
109.5 |
109.5 |
| CAI |
CAV |
CAU |
109.3 |
108.9 |
| CAV |
CAU |
H7 |
111.1 |
112.1 |
| CAU |
CAV |
H8 |
109.5 |
109.6 |
| CAU |
CAV |
H9 |
109.5 |
109.6 |
| CAF |
CAA |
CAL |
118.0 |
120.6 |
| CAA |
CAL |
CAQ |
119.4 |
120.1 |
| CAA |
CAL |
CAM |
118.0 |
120.1 |
| CAV |
CAI |
H1 |
108.2 |
109.4 |
| CAI |
CAV |
H8 |
109.5 |
109.5 |
| CAI |
CAV |
H9 |
109.5 |
109.5 |
| CAM |
CAL |
CAQ |
122.6 |
119.8 |
| CAL |
CAQ |
CAP |
119.2 |
119.9 |
| CAL |
CAM |
CAN |
119.0 |
119.9 |
| CAQ |
CAP |
H6 |
121.5 |
119.9 |
| CAM |
CAN |
CAO |
117.0 |
120.1 |
| CAM |
CAN |
H5 |
121.5 |
119.9 |
| CAP |
CAO |
FAR |
117.9 |
119.9 |
| CAN |
CAO |
FAR |
117.1 |
119.8 |
| CAO |
CAN |
H5 |
121.5 |
120.0 |
| H2 |
CAJ |
H3 |
109.5 |
109.6 |
| H8 |
CAV |
H9 |
109.5 |
109.7 |
| H10 |
CAX |
H11 |
109.5 |
109.5 |
| H10 |
CAX |
H12 |
109.5 |
109.4 |
| H11 |
CAX |
H12 |
109.4 |
109.4 |
| H13 |
CAY |
H14 |
109.5 |
110.4 |
| H15 |
CAZ |
H16 |
109.5 |
110.5 |
Torsion Angles for 8Z8
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NBC |
CBB |
NBA |
NAC |
360.0 |
359.7 |
| NBA |
CBB |
NBC |
H17 |
180.0 |
180.5 |
| NBC |
CBB |
NBA |
H17 |
180.0 |
179.5 |
| NAC |
NBA |
CBB |
NBC |
360.0 |
359.7 |
| NAC |
NBA |
CBB |
H17 |
180.0 |
180.2 |
| CAZ |
CAY |
CAK |
NAH |
333.9 |
334.8 |
| CAZ |
CAY |
CAK |
H4 |
214.9 |
212.9 |
| CAY |
CAZ |
CAU |
H7 |
144.9 |
147.0 |
| H13 |
CAY |
CAZ |
H14 |
239.1 |
122.3 |
| H15 |
CAZ |
CAY |
H16 |
239.1 |
122.4 |
| CAB |
NAH |
CAK |
CAY |
240.0 |
221.6 |
| CAY |
CAK |
NAH |
CAU |
46.2 |
41.6 |
| NAH |
CAK |
CAY |
H4 |
118.9 |
121.9 |
| CAY |
CAK |
CAJ |
H2 |
62.5 |
192.4 |
| CAY |
CAK |
CAJ |
H3 |
182.5 |
72.1 |
| CBB |
NBA |
NAC |
CAD |
359.8 |
0.0 |
| NAC |
CAD |
NAE |
CAF |
0.2 |
0.2 |
| CAD |
NAC |
CAB |
NAH |
180.0 |
180.0 |
| CAD |
NAE |
CAF |
CL1 |
180.0 |
180.0 |
| NAC |
CAB |
NAH |
CAK |
31.7 |
244.2 |
| NAC |
CAB |
NAH |
CAU |
227.6 |
64.1 |
| CAK |
NAH |
CAU |
CAZ |
313.7 |
318.4 |
| CAB |
NAH |
CAU |
CAZ |
119.9 |
138.4 |
| NAH |
CAU |
CAZ |
H7 |
240.9 |
238.1 |
| CAV |
CAU |
CAZ |
H7 |
122.1 |
124.3 |
| CAZ |
CAU |
CAV |
H8 |
178.7 |
287.9 |
| CAZ |
CAU |
CAV |
H9 |
298.7 |
167.6 |
| CAY |
CAK |
NAH |
H4 |
242.9 |
237.7 |
| NAH |
CAK |
CAJ |
H2 |
170.2 |
304.3 |
| NAH |
CAK |
CAJ |
H3 |
290.2 |
183.9 |
| CAB |
NAH |
CAK |
CAU |
193.8 |
180.0 |
| CAK |
NAH |
CAU |
H7 |
196.3 |
196.1 |
| CAB |
NAH |
CAK |
CAJ |
125.7 |
107.3 |
| CAK |
CAJ |
CAI |
CAV |
326.4 |
306.1 |
| CAK |
CAJ |
CAI |
H1 |
204.2 |
186.1 |
| H2 |
CAJ |
CAK |
H3 |
240.0 |
120.3 |
| CAY |
CAK |
NAH |
CAB |
240.0 |
221.6 |
| CAK |
NAH |
CAB |
CAU |
164.0 |
180.0 |
| CAB |
NAH |
CAK |
H4 |
357.0 |
343.9 |
| NAH |
CAB |
CAA |
CAL |
0.3 |
360.0 |
| CAB |
NAH |
CAU |
H7 |
2.5 |
16.2 |
| CAF |
CAA |
CAB |
CAL |
179.9 |
180.3 |
| CAB |
CAA |
CAL |
CAQ |
269.5 |
84.3 |
| CAB |
CAA |
CAL |
CAM |
88.9 |
264.6 |
| CAZ |
CAU |
NAH |
H7 |
117.4 |
122.3 |
| CAB |
NAH |
CAU |
CAK |
166.1 |
180.0 |
| CAU |
NAH |
CAK |
H4 |
163.2 |
163.9 |
| CAV |
CAU |
NAH |
H7 |
231.4 |
236.5 |
| NAH |
CAU |
CAV |
H8 |
70.6 |
176.2 |
| NAH |
CAU |
CAV |
H9 |
190.7 |
55.8 |
| OAW |
CAI |
CAJ |
H1 |
240.0 |
240.1 |
| CAJ |
CAI |
CAV |
CAU |
33.1 |
53.9 |
| CAV |
CAI |
CAJ |
H1 |
122.3 |
120.1 |
| CAJ |
CAI |
CAV |
H8 |
273.1 |
173.7 |
| CAJ |
CAI |
CAV |
H9 |
153.1 |
294.1 |
| CAJ |
CAI |
OAW |
H1 |
117.5 |
119.9 |
| CAV |
CAI |
OAW |
H1 |
242.1 |
240.1 |
| OAW |
CAI |
CAV |
H8 |
155.6 |
53.7 |
| OAW |
CAI |
CAV |
H9 |
35.6 |
174.1 |
| CAX |
OAW |
CAI |
H1 |
38.9 |
330.0 |
| H10 |
CAX |
OAW |
H11 |
240.0 |
239.9 |
| H10 |
CAX |
OAW |
H12 |
120.0 |
120.0 |
| H11 |
CAX |
OAW |
H12 |
240.0 |
240.0 |
| CAZ |
CAU |
CAV |
H7 |
237.9 |
235.3 |
| CAK |
NAH |
CAU |
CAV |
67.7 |
72.6 |
| CAB |
NAH |
CAU |
CAV |
233.8 |
252.6 |
| NAH |
CAU |
CAV |
H7 |
129.8 |
123.6 |
| CAU |
CAV |
CAI |
H1 |
155.3 |
174.0 |
| CAI |
CAV |
CAU |
H8 |
240.0 |
119.8 |
| CAI |
CAV |
CAU |
H9 |
120.0 |
240.2 |
| H8 |
CAV |
CAU |
H9 |
240.0 |
120.4 |
| CAB |
CAA |
CAF |
CAL |
180.1 |
179.7 |
| CAF |
CAA |
CAL |
CAQ |
89.6 |
263.9 |
| CAF |
CAA |
CAL |
CAM |
269.0 |
84.3 |
| CL1 |
CAF |
CAA |
CAL |
359.9 |
0.0 |
| CAM |
CAL |
CAA |
CAQ |
179.3 |
180.3 |
| CAA |
CAL |
CAQ |
CAP |
179.7 |
179.7 |
| CAA |
CAL |
CAM |
CAN |
180.3 |
180.0 |
| CAJ |
CAI |
CAV |
H1 |
237.8 |
239.9 |
| OAW |
CAI |
CAV |
H1 |
120.3 |
120.0 |
| CAI |
CAV |
CAU |
H7 |
180.9 |
172.4 |
| CAU |
CAV |
CAI |
H8 |
120.0 |
240.2 |
| CAU |
CAV |
CAI |
H9 |
240.0 |
119.8 |
| H8 |
CAV |
CAI |
H9 |
120.0 |
239.6 |
| FAT |
CAQ |
CAP |
H6 |
359.9 |
359.9 |
| CAA |
CAL |
CAQ |
CAM |
179.3 |
180.3 |
| CAQ |
CAL |
CAM |
CAN |
359.6 |
0.3 |
| CAL |
CAQ |
CAP |
H6 |
179.7 |
180.3 |
| CAA |
CAL |
CAM |
CAQ |
180.7 |
179.7 |
| CAM |
CAL |
CAQ |
CAP |
0.4 |
359.4 |
| CAL |
CAM |
CAN |
CAO |
0.3 |
360.0 |
| CAL |
CAM |
CAN |
H5 |
180.3 |
180.0 |
| CAQ |
CAP |
CAO |
FAR |
180.1 |
179.7 |
| FAS |
CAM |
CAN |
H5 |
0.1 |
0.0 |
| CAN |
CAM |
CAL |
CAQ |
359.6 |
0.3 |
| CAM |
CAN |
CAO |
FAR |
179.9 |
179.9 |
| CAO |
CAN |
CAM |
H5 |
180.0 |
180.0 |
| CAL |
CAQ |
CAP |
CAO |
359.7 |
0.7 |
| CAN |
CAO |
CAP |
FAR |
180.1 |
179.9 |
| CAP |
CAO |
CAN |
H5 |
179.8 |
180.1 |
| CAM |
CAN |
CAO |
H5 |
180.0 |
180.0 |
| CAP |
CAO |
CAN |
FAR |
179.9 |
180.1 |
| FAR |
CAO |
CAN |
H5 |
359.9 |
360.0 |
| CAJ |
CAI |
H1 |
CAV |
127.3 |
120.2 |
| H1 |
CAI |
CAV |
CAU |
155.3 |
174.0 |
| H1 |
CAI |
CAV |
H8 |
35.3 |
293.8 |
| H1 |
CAI |
CAV |
H9 |
275.3 |
54.1 |
| CAK |
CAJ |
H2 |
H3 |
120.0 |
239.6 |
| H2 |
CAJ |
CAI |
CAV |
206.5 |
65.9 |
| H2 |
CAJ |
CAI |
H1 |
84.2 |
305.9 |
| CAK |
CAJ |
H3 |
H2 |
240.0 |
120.3 |
| H3 |
CAJ |
CAI |
CAV |
86.4 |
186.2 |
| H3 |
CAJ |
CAI |
H1 |
324.1 |
66.1 |
| CAY |
CAK |
H4 |
NAH |
109.0 |
117.3 |
| H4 |
CAK |
NAH |
CAU |
163.2 |
163.9 |
| H4 |
CAK |
CAJ |
H2 |
300.0 |
67.8 |
| H4 |
CAK |
CAJ |
H3 |
60.0 |
307.5 |
| CAM |
CAN |
H5 |
CAO |
180.0 |
180.0 |
| H5 |
CAN |
CAO |
FAR |
359.9 |
360.0 |
| H6 |
CAP |
CAO |
FAR |
0.1 |
0.1 |
| H7 |
CAU |
CAV |
H8 |
300.8 |
52.6 |
| H7 |
CAU |
CAV |
H9 |
60.9 |
292.2 |
| CAI |
CAV |
H8 |
CAU |
119.9 |
240.6 |
| H8 |
CAV |
CAU |
H7 |
300.8 |
52.6 |
| CAU |
CAV |
H8 |
H9 |
120.1 |
239.7 |
| H8 |
CAV |
CAI |
H1 |
35.3 |
293.8 |
| CAI |
CAV |
H8 |
H9 |
240.0 |
120.3 |
| CAI |
CAV |
H9 |
CAU |
240.1 |
119.4 |
| H9 |
CAV |
CAU |
H7 |
60.9 |
292.2 |
| CAU |
CAV |
H9 |
H8 |
239.9 |
120.3 |
| H9 |
CAV |
CAI |
H1 |
275.3 |
54.1 |
| CAI |
CAV |
H9 |
H8 |
120.0 |
239.7 |
| OAW |
CAX |
H10 |
H11 |
120.0 |
120.1 |
| OAW |
CAX |
H10 |
H12 |
240.0 |
240.0 |
| H11 |
CAX |
H10 |
H12 |
120.0 |
119.9 |
| OAW |
CAX |
H11 |
H10 |
240.0 |
240.0 |
| OAW |
CAX |
H11 |
H12 |
120.0 |
120.0 |
| H10 |
CAX |
H11 |
H12 |
240.0 |
240.1 |
| OAW |
CAX |
H12 |
H10 |
120.0 |
120.0 |
| OAW |
CAX |
H12 |
H11 |
240.0 |
240.0 |
| H10 |
CAX |
H12 |
H11 |
120.0 |
120.0 |
| CAZ |
CAY |
H13 |
H14 |
121.3 |
237.7 |
| H13 |
CAY |
CAZ |
H15 |
239.4 |
122.4 |
| H13 |
CAY |
CAZ |
H16 |
0.3 |
360.0 |
| H13 |
CAY |
CAK |
NAH |
214.3 |
93.7 |
| H13 |
CAY |
CAK |
H4 |
95.3 |
331.7 |
| CAZ |
CAY |
H14 |
H13 |
238.7 |
122.3 |
| H14 |
CAY |
CAZ |
H15 |
0.2 |
0.1 |
| H14 |
CAY |
CAZ |
H16 |
121.2 |
237.6 |
| H14 |
CAY |
CAK |
NAH |
93.4 |
216.0 |
| H14 |
CAY |
CAK |
H4 |
334.5 |
94.1 |
| H15 |
CAZ |
CAY |
H13 |
239.4 |
122.4 |
| H15 |
CAZ |
CAY |
H14 |
0.2 |
0.1 |
| CAY |
CAZ |
H15 |
H16 |
121.4 |
237.6 |
| H15 |
CAZ |
CAU |
H7 |
25.4 |
265.8 |
| H16 |
CAZ |
CAY |
H13 |
0.3 |
360.0 |
| H16 |
CAZ |
CAY |
H14 |
121.2 |
237.6 |
| CAY |
CAZ |
H16 |
H15 |
238.6 |
122.4 |
| H16 |
CAZ |
CAU |
H7 |
264.4 |
28.2 |
| NBA |
CBB |
H17 |
NBC |
180.0 |
179.4 |
| H17 |
CBB |
NBA |
NAC |
180.0 |
180.2 |