Atom Nomenclature for 8WN

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 8WN

Atom Name (V3) Atom Name (V2)
OAD O1
CBF C1
CBG C2
CAP C3
NAY N1
NBJ N2
CAB C4
CBH C5
NAX N3
CAQ C6
NBK N4
CAW C7
CBL C8
CAV C9
CAT C10
OAG O2
CAU C11
CAS C12
NBI N5
CBA C13
OAC O3
CBB C14
CAL C15
CAO C16
CAK C17
CAN C18
CBC C19
CBE C20
CAM C21
CAI C22
CAH C23
CAJ C24
CBD C25
NAZ N6
SBM S1
OAE O4
OAF O5
CAR C26
CAA C27
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H25 H25
H26 H26
H27 H27
H28 H28
H29 H29
H30 H30