PDB Chemical Component 8VU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 8VU

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
F20 C06 1.352 1.352
C06 C05 1.395 1.383
C06 C01 1.390 1.386
F21 C01 1.370 1.351
C05 C04 1.393 1.382
C01 C02 1.389 1.384
C04 C07 1.558 1.507
C04 C03 1.388 1.384
O12 C10 1.179 1.213
C02 C03 1.392 1.384
O18 C14 1.185 1.213
C08 C07 1.542 1.531
C08 C09 1.552 1.530
C08 N19 1.435 1.469
C03 F22 1.365 1.352
C10 C09 1.563 1.507
C10 N11 1.499 1.348
C14 C13 1.500 1.504
C14 N15 1.462 1.334
C13 N11 1.455 1.471
C13 C23 1.545 1.530
N11 C17 1.467 1.473
N15 C16 1.474 1.457
C26 C25 1.551 1.530
C17 C16 1.559 1.530
O24 C23 1.438 1.429
O24 C25 1.438 1.429
C25 C28 1.521 1.530
C25 C27 1.523 1.529
C13 H131 1.100 1.090
C17 H172 1.100 1.090
C17 H171 1.100 1.089
C26 H3 1.100 1.091
C26 H1 1.100 1.090
C26 H2 1.100 1.090
C28 H5 1.100 1.089
C28 H6 1.100 1.091
C28 H4 1.100 1.090
C02 H021 1.080 1.081
C05 H051 1.080 1.079
C07 H072 1.100 1.090
C07 H071 1.100 1.090
C08 H7 1.100 1.089
C09 H092 1.100 1.090
C09 H091 1.100 1.090
N15 H8 1.000 0.970
C16 H161 1.100 1.091
C16 H162 1.100 1.090
N19 H10 1.000 1.009
N19 H9 1.000 1.009
C23 H231 1.100 1.090
C23 H232 1.100 1.091
C27 H14 1.100 1.090
C27 H12 1.100 1.090
C27 H13 1.100 1.091

Bond Angles for 8VU

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C06 C05 H051 120.0 120.0
C05 C04 C07 119.0 120.0
C01 C02 C03 120.1 120.0
C01 C02 H021 120.0 120.0
C04 C07 H072 110.7 109.5
C04 C07 H071 110.7 109.5
C04 C03 F22 121.4 120.0
C02 C03 F22 118.6 120.0
C03 C02 H021 119.9 120.0
C08 C07 H072 110.8 109.5
C08 C07 H071 110.8 109.4
C09 C08 N19 105.9 109.4
C10 C09 C08 115.7 109.4
C09 C08 H7 108.3 109.5
C08 C09 H092 107.9 109.5
C08 C09 H091 107.9 109.5
N19 C08 H7 109.8 109.5
C08 N19 H10 109.5 111.0
C08 N19 H9 109.4 111.1
C09 C10 N11 117.9 120.0
C10 C09 H092 107.9 109.4
C10 C09 H091 107.9 109.5
C10 N11 C13 120.0 121.4
C10 N11 C17 120.7 121.3
C14 C13 C23 109.5 109.6
C14 C13 H131 110.4 109.7
C14 N15 C16 120.6 124.5
C14 N15 H8 119.7 117.8
N11 C13 C23 109.6 109.5
C13 N11 C17 119.4 117.3
N11 C13 H131 111.1 109.5
C23 C13 H131 109.8 109.5
C13 C23 H231 109.9 109.5
C13 C23 H232 109.9 109.4
N11 C17 C16 113.0 108.2
N11 C17 H172 108.6 109.7
N11 C17 H171 108.6 109.8
C17 C16 N15 114.9 110.8
C16 N15 H8 119.7 117.7
N15 C16 H161 108.1 109.2
N15 C16 H162 108.1 109.2
C26 C25 O24 107.8 109.5
C26 C25 C28 107.3 109.5
C26 C25 C27 109.1 109.5
C25 C26 H3 109.5 109.4
C25 C26 H1 109.5 109.5
C25 C26 H2 109.5 109.5
C16 C17 H172 108.5 109.7
C16 C17 H171 108.6 109.7
C17 C16 H161 108.1 109.2
C17 C16 H162 108.1 109.2
O24 C23 H231 109.9 109.5
O24 C23 H232 109.9 109.5
O24 C25 C27 108.8 109.5
C25 C28 H5 109.5 109.5
C25 C28 H6 109.5 109.5
C25 C28 H4 109.5 109.4
C25 C27 H14 109.5 109.5
C25 C27 H12 109.5 109.5
C25 C27 H13 109.5 109.5
H172 C17 H171 109.5 109.7
H3 C26 H1 109.5 109.5
H3 C26 H2 109.5 109.5
H1 C26 H2 109.5 109.5
H5 C28 H6 109.4 109.5
H5 C28 H4 109.5 109.5
H6 C28 H4 109.5 109.4
H072 C07 H071 109.5 109.5
H092 C09 H091 109.5 109.5
H161 C16 H162 109.5 109.2
H10 N19 H9 109.5 111.0
H231 C23 H232 109.5 109.5
H14 C27 H12 109.4 109.5
H14 C27 H13 109.5 109.4
H12 C27 H13 109.5 109.4

Torsion Angles for 8VU

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
F20 C06 C05 H051 0.2 0.0
C06 C05 C04 C07 180.7 180.0
C06 C01 C02 H021 180.0 180.0
F21 C01 C02 H021 0.0 359.6
C05 C04 C07 H072 186.3 25.0
C05 C04 C07 H071 307.9 145.0
C05 C04 C03 F22 180.2 180.0
C01 C02 C03 F22 180.0 180.0
C03 C02 C01 H021 180.0 180.1
C07 C04 C03 F22 359.0 360.0
C08 C07 C04 H072 240.8 240.0
C08 C07 C04 H071 119.2 119.9
H072 C07 C04 H071 238.4 240.0
C02 C03 C04 F22 180.3 180.0
C04 C03 C02 H021 179.7 180.0
O12 C10 C09 H092 258.7 119.7
O12 C10 C09 H091 140.5 239.7
C01 C02 C03 H021 180.0 179.9
C04 C03 C02 F22 179.7 180.0
O18 C14 C13 C23 100.9 47.4
O18 C14 C13 H131 340.0 287.1
O18 C14 N15 H8 0.7 4.4
C04 C07 C08 H072 119.2 120.0
C04 C07 C08 H071 240.8 240.0
C10 C09 C08 C07 32.1 175.0
H072 C07 C08 H071 121.6 120.0
C09 C08 C07 H072 61.4 65.0
C09 C08 C07 H071 299.8 304.9
N19 C08 C09 H7 242.3 240.0
C09 C08 N19 H10 54.8 176.0
C09 C08 N19 H9 174.8 300.0
C08 C09 C10 N11 198.6 180.0
C10 C09 C08 H092 239.1 120.0
C10 C09 C08 H091 120.9 240.0
H092 C09 C08 H091 241.8 120.0
N19 C08 C07 H072 302.5 305.0
N19 C08 C07 H071 180.9 185.0
C10 C09 C08 N19 152.3 295.0
C09 C08 N19 H7 116.7 120.1
N19 C08 C09 H092 273.2 175.0
N19 C08 C09 H091 31.4 54.9
H10 N19 C08 H9 240.0 236.0
F22 C03 C02 H021 360.0 0.1
C10 C09 C08 H7 270.0 55.0
C08 C09 C10 H092 120.9 240.0
C08 C09 C10 H091 239.1 120.0
C09 C10 N11 C13 180.4 174.0
C09 C10 N11 C17 0.0 354.0
H092 C09 C10 H091 118.2 240.0
N11 C10 C09 C08 198.6 180.0
N11 C10 C09 H092 77.7 300.0
N11 C10 C09 H091 319.5 60.0
C10 N11 C13 C23 237.9 342.6
C13 N11 C10 C17 180.4 180.0
C10 N11 C13 H131 359.3 102.7
C10 N11 C17 C16 218.1 118.5
C10 N11 C17 H172 338.6 238.2
C10 N11 C17 H171 97.5 358.8
N11 C13 C14 C23 118.4 119.8
N11 C13 C14 H131 239.3 240.1
C23 C13 C14 H131 120.9 120.3
C14 C13 C23 H231 352.2 179.4
C14 C13 C23 H232 112.8 299.4
N15 C14 C13 C23 280.1 227.5
N15 C14 C13 H131 159.1 107.2
C17 C16 N15 C14 334.5 338.1
C16 N15 C14 H8 180.0 180.0
C14 N15 C16 H161 95.3 217.8
C14 N15 C16 H162 213.7 98.5
C10 N11 C13 C17 179.6 180.0
C14 C13 N11 C23 241.7 240.1
C14 C13 N11 H131 120.2 120.0
C23 C13 N11 H131 238.6 239.9
N11 C13 C23 H231 235.7 60.0
N11 C13 C23 H232 356.3 180.0
C13 N11 C17 C16 37.7 298.6
C13 N11 C17 H172 158.2 58.2
C13 N11 C17 H171 277.2 178.8
C14 C13 C23 H131 238.7 239.6
C23 C13 N11 C17 58.3 162.6
N11 C13 C23 H131 122.2 120.1
O24 C23 C13 H231 240.3 240.0
O24 C23 C13 H232 119.7 120.0
H231 C23 C13 H232 239.5 240.0
C10 N11 C17 C13 180.4 180.0
C17 N11 C13 C23 58.3 162.6
C17 N11 C13 H131 179.7 282.7
N11 C17 C16 N15 7.0 46.7
C16 C17 N11 H172 239.5 240.4
C16 C17 N11 H171 120.5 119.8
N11 C17 C16 H161 246.2 167.1
N11 C17 C16 H162 127.8 286.4
H172 C17 N11 H171 241.0 239.4
C14 N15 C16 H8 180.0 180.0
N15 C16 C17 H172 246.5 287.0
N15 C16 C17 H171 127.5 166.5
C17 C16 N15 H161 239.2 120.4
C17 C16 N15 H162 120.8 239.7
H161 C16 N15 H162 241.6 119.3
O24 C25 C26 C27 118.0 240.0
C26 C25 C28 H5 180.0 60.0
C26 C25 C28 H6 300.0 180.0
C26 C25 C28 H4 60.0 299.9
C26 C25 C27 H14 180.0 60.0
C26 C25 C27 H12 300.0 180.0
C26 C25 C27 H13 60.0 300.0
H3 C26 C25 H1 240.0 240.0
H3 C26 C25 H2 120.0 120.0
H1 C26 C25 H2 240.0 239.9
C14 N15 C16 C17 334.5 338.1
N11 C17 C16 H172 120.5 119.7
N11 C17 C16 H171 239.5 240.2
C17 C16 N15 H8 154.5 158.1
N15 C16 C17 H161 120.8 239.6
N15 C16 C17 H162 239.2 120.3
H172 C17 C16 H171 118.9 120.5
H161 C16 C17 H162 118.4 240.7
O24 C23 C13 H131 353.8 179.8
C13 C23 O24 H231 119.7 120.0
C13 C23 O24 H232 240.3 240.1
C26 C25 O24 C23 124.6 60.0
H231 C23 O24 H232 120.5 120.1
C26 C25 O24 C28 119.7 240.0
C26 C25 O24 C27 241.8 120.0
O24 C25 C26 H3 180.0 60.0
O24 C25 C26 H1 300.0 180.0
O24 C25 C26 H2 60.0 300.0
C25 O24 C23 H231 137.0 60.0
C25 O24 C23 H232 16.4 299.9
O24 C25 C28 H5 299.9 300.0
O24 C25 C28 H6 59.9 60.0
O24 C25 C28 H4 179.9 179.9
O24 C25 C27 H14 62.7 180.0
O24 C25 C27 H12 182.7 300.0
O24 C25 C27 H13 302.7 60.0
C26 C25 C28 O24 240.1 120.0
C26 C25 C28 C27 117.9 240.0
C28 C25 C26 H3 304.5 300.0
C28 C25 C26 H1 64.5 60.0
C28 C25 C26 H2 184.5 180.1
H5 C28 C25 H6 240.0 240.0
H5 C28 C25 H4 120.0 120.1
H6 C28 C25 H4 240.0 240.1
C26 C25 C27 O24 117.3 240.0
C26 C25 C27 C28 243.3 120.0
C27 C25 C26 H3 62.0 180.0
C27 C25 C26 H1 182.1 300.0
C27 C25 C26 H2 302.0 60.1
C27 C25 C28 H5 62.1 180.0
C27 C25 C28 H6 182.1 300.0
C27 C25 C28 H4 302.1 59.9
H14 C27 C25 H12 240.0 239.9
H14 C27 C25 H13 120.0 120.0
H12 C27 C25 H13 240.0 240.0
C14 C13 H131 C23 120.8 120.3
N11 C13 H131 C23 238.7 239.9
H131 C13 N11 C17 179.7 282.7
H131 C13 C23 H231 113.5 299.8
H131 C13 C23 H232 234.1 59.8
N11 C17 H172 C16 236.8 241.3
N11 C17 H172 H171 118.4 120.7
H172 C17 C16 N15 246.5 287.0
C16 C17 H172 H171 241.6 239.4
H172 C17 C16 H161 125.7 47.4
H172 C17 C16 H162 7.3 166.7
N11 C17 H171 C16 123.2 118.8
N11 C17 H171 H172 241.6 239.4
H171 C17 C16 N15 127.5 166.5
C16 C17 H171 H172 118.4 120.6
H171 C17 C16 H161 6.7 286.9
H171 C17 C16 H162 248.3 46.2
H3 C26 C25 O24 180.0 60.0
H3 C26 C25 C28 304.5 300.0
H3 C26 C25 C27 62.0 180.0
C25 C26 H3 H1 120.0 120.0
C25 C26 H3 H2 240.0 240.0
H1 C26 H3 H2 120.0 120.0
H1 C26 C25 O24 300.0 180.0
H1 C26 C25 C28 64.5 60.0
H1 C26 C25 C27 182.1 300.0
C25 C26 H1 H3 240.0 240.0
C25 C26 H1 H2 120.0 120.0
H3 C26 H1 H2 240.0 240.0
H2 C26 C25 O24 60.0 300.0
H2 C26 C25 C28 184.5 180.1
H2 C26 C25 C27 302.0 60.1
C25 C26 H2 H3 120.0 120.0
C25 C26 H2 H1 240.0 240.0
H3 C26 H2 H1 120.0 120.0
C25 C28 H5 H6 120.0 120.0
C25 C28 H5 H4 240.0 240.0
H6 C28 H5 H4 120.0 120.0
C25 C28 H6 H5 240.0 240.0
C25 C28 H6 H4 120.0 119.9
H5 C28 H6 H4 240.0 239.9
C25 C28 H4 H5 120.0 120.1
C25 C28 H4 H6 240.0 240.1
H5 C28 H4 H6 120.0 120.0
C01 C02 H021 C03 180.0 180.1
H021 C02 C03 F22 360.0 0.1
H051 C05 C04 C07 0.7 360.0
C04 C07 H072 H071 122.4 120.0
C08 C07 H072 H071 237.6 240.0
C04 C07 H071 H072 237.6 240.0
C08 C07 H071 H072 122.4 120.0
H7 C08 C07 H072 183.5 185.0
H7 C08 C07 H071 61.8 65.0
C09 C08 H7 N19 244.9 240.0
H7 C08 C09 H092 30.9 295.0
H7 C08 C09 H091 149.0 175.0
H7 C08 N19 H10 298.1 56.0
H7 C08 N19 H9 58.2 179.9
H092 C09 C08 N19 273.2 175.0
C10 C09 H092 C08 125.7 240.0
H092 C09 C08 H7 30.9 295.0
C08 C09 H092 H091 117.1 239.9
H092 C09 C10 N11 77.7 300.0
C10 C09 H092 H091 242.8 120.0
H091 C09 C08 N19 31.4 54.9
C10 C09 H091 C08 234.3 120.0
H091 C09 C08 H7 149.0 175.0
C08 C09 H091 H092 242.8 120.1
H091 C09 C10 N11 319.5 60.0
C10 C09 H091 H092 117.1 240.0
C14 N15 H8 C16 180.0 180.0
H8 N15 C16 H161 275.4 37.7
H8 N15 C16 H162 33.7 278.4
C17 C16 H161 N15 125.0 238.7
H161 C16 N15 H8 275.4 37.7
N15 C16 H161 H162 117.5 240.7
H161 C16 C17 H172 125.7 47.4
H161 C16 C17 H171 6.7 286.9
C17 C16 H161 H162 242.4 119.3
C17 C16 H162 N15 235.1 121.3
H162 C16 N15 H8 33.7 278.4
N15 C16 H162 H161 242.5 119.3
H162 C16 C17 H172 7.3 166.7
H162 C16 C17 H171 248.3 46.2
C17 C16 H162 H161 117.6 240.7
H10 N19 C08 H7 298.1 56.0
C08 N19 H10 H9 120.0 124.0
H9 N19 C08 H7 58.2 179.9
C08 N19 H9 H10 240.0 236.0
H231 C23 C13 H131 113.5 299.8
C13 C23 H231 H232 120.8 120.0
O24 C23 H231 H232 239.2 239.9
H232 C23 C13 H131 234.1 59.8
C13 C23 H232 H231 239.2 240.0
O24 C23 H232 H231 120.8 120.1
C25 C27 H14 H12 120.0 120.1
C25 C27 H14 H13 240.0 240.0
H12 C27 H14 H13 120.0 119.9
C25 C27 H12 H14 240.0 239.9
C25 C27 H12 H13 120.0 120.0
H14 C27 H12 H13 240.0 240.1
C25 C27 H13 H14 120.0 120.0
C25 C27 H13 H12 240.0 240.0
H14 C27 H13 H12 119.9 120.0