PDB Chemical Component 8S5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 8S5

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
F1	C4	1.388	1.399
N4	C9	1.332	1.348
C5	C4	1.452	1.549
C5	N1	1.469	1.474
C4	C3	1.467	1.552
C8	C7	1.402	1.345
C8	N3	1.396	1.379
N2	C7	1.402	1.406
N2	C6	1.352	1.348
C9	N3	1.418	1.348
C9	O2	1.209	1.215
C7	C11	1.407	1.470
N3	C10	1.410	1.383
C11	C10	1.406	1.406
C11	C12	1.406	1.395
C10	C15	1.402	1.390
N1	C6	1.343	1.348
N1	C2	1.439	1.471
C12	C13	1.390	1.367
C15	C14	1.383	1.378
C6	O3	1.253	1.216
C3	C2	1.528	1.543
C13	C14	1.394	1.387
C2	C1	1.500	1.506
O1	C1	1.221	1.213
C1	N5	1.360	1.347
N5	C16	1.429	1.399
C16	C17	1.389	1.389
C16	C22	1.391	1.388
C17	C18	1.396	1.382
C22	C20	1.388	1.386
C18	C19	1.387	1.382
C20	C19	1.392	1.388
C20	O4	1.423	1.359
F3	C21	1.321	1.399
O4	C21	1.303	1.429
C21	F4	1.308	1.399
C21	F2	1.332	1.399
C4	H1	1.100	1.090
C14	H2	1.080	1.080
C5	H3	1.100	1.090
C5	H4	1.100	1.091
C8	H5	1.080	1.079
C12	H6	1.080	1.080
C13	H7	1.080	1.080
N2	H8	1.000	0.970
C3	H9	1.100	1.090
C3	H10	1.100	1.090
C2	H11	1.099	1.090
N4	H12	1.000	0.970
N4	H13	1.000	0.970
C15	H14	1.080	1.081
N5	H15	1.000	0.970
C17	H16	1.080	1.080
C18	H17	1.080	1.079
C19	H18	1.080	1.080
C22	H19	1.080	1.080

Bond Angles for 8S5

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
F1	C4	H1	108.0	110.9
N4	C9	O2	123.7	120.0
C5	C4	C3	105.1	101.6
C5	C4	H1	107.2	111.0
C5	N1	C6	130.3	125.6
C5	N1	C2	108.7	108.7
N1	C5	H3	111.7	110.3
N1	C5	H4	111.7	110.4
C4	C3	C2	101.4	102.9
C3	C4	H1	107.0	111.0
C4	C3	H9	111.4	110.7
C4	C3	H10	111.5	110.7
C8	N3	C9	125.3	125.2
C8	N3	C10	108.4	109.7
N3	C8	H5	126.2	125.2
N2	C6	O3	121.7	120.0
N3	C9	O2	121.8	120.0
C9	N3	C10	126.2	125.1
C7	C11	C10	107.3	106.2
C7	C11	C12	133.7	133.8
N3	C10	C15	129.8	133.4
C10	C11	C12	118.9	119.9
C11	C10	C15	122.2	119.4
C11	C12	C13	118.8	119.8
C11	C12	H6	120.6	120.1
C10	C15	H14	121.3	120.0
N1	C6	O3	121.9	120.0
N1	C2	C3	105.1	107.3
N1	C2	C1	114.9	109.9
N1	C2	H11	107.9	109.9
C13	C12	H6	120.6	120.1
C12	C13	H7	119.4	119.8
C15	C14	H2	119.3	119.7
C3	C2	C1	114.5	109.9
C2	C3	H9	111.5	110.8
C2	C3	H10	111.4	110.7
C3	C2	H11	106.8	109.9
C13	C14	H2	119.3	119.7
C2	C1	N5	116.5	120.0
O1	C1	N5	124.1	120.0
C1	N5	C16	127.8	120.0
C1	N5	H15	116.1	120.1
N5	C16	C17	123.1	120.1
N5	C16	C22	117.3	120.0
C16	N5	H15	116.1	119.9
C17	C16	C22	119.5	119.9
C16	C17	C18	119.9	120.1
C16	C17	H16	120.1	120.0
C16	C22	C20	120.2	119.9
C16	C22	H19	119.9	120.1
C17	C18	C19	120.9	120.1
C18	C17	H16	120.1	119.9
C17	C18	H17	119.5	120.0
C19	C18	H17	119.6	119.9
C18	C19	H18	120.6	120.0
C20	C19	H18	120.6	119.9
C20	O4	C21	117.6	117.0
F3	C21	F4	105.0	109.5
O4	C21	F4	112.2	109.5
O4	C21	F2	106.6	109.5
F2	C21	F4	108.8	109.5
H3	C5	H4	109.5	110.4
H9	C3	H10	109.5	110.8
H12	N4	H13	120.0	120.0

Torsion Angles for 8S5

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C5	C4	F1	H1	119.5	123.9
C3	C4	F1	H1	241.1	236.1
F1	C4	C3	H9	31.6	35.8
F1	C4	C3	H10	154.2	159.0
N3	C9	N4	O2	183.5	180.1
F1	C4	C5	H1	240.1	236.2
C5	C4	C3	C2	39.7	35.5
C3	C4	C5	H1	113.6	118.1
C5	C4	C3	H9	158.4	153.9
C5	C4	C3	H10	281.1	277.2
N1	C5	C4	C3	316.3	323.0
N1	C5	C4	H1	202.7	204.9
C5	N1	C6	O3	178.3	179.9
C5	N1	C2	C3	353.3	359.0
C5	N1	C2	C1	120.0	118.4
C5	N1	C2	H11	239.5	239.6
H3	C5	N1	H4	122.9	122.3
F1	C4	C3	H1	119.5	123.8
C5	C4	C3	H1	246.3	241.9
N1	C2	C3	C4	340.3	337.8
C4	C3	C2	C1	213.3	218.4
C2	C3	C4	H9	241.3	241.6
C2	C3	C4	H10	118.7	118.4
C4	C3	C2	H11	94.8	97.2
H9	C3	C4	H10	237.4	236.7
C8	C7	C11	C10	1.3	0.4
C8	C7	C11	C12	183.4	180.1
C8	N3	C9	O2	170.2	180.0
C9	N3	C8	C10	177.5	180.1
C8	N3	C10	C15	176.3	179.7
C7	N2	C6	O3	357.0	360.0
N1	C6	N2	O3	184.7	180.0
N4	C9	N3	O2	176.6	179.9
C8	N3	C9	C10	182.9	179.9
C9	N3	C8	H5	0.3	359.9
C9	N3	C10	C15	358.8	359.7
O2	C9	N3	C10	347.3	0.1
C10	C11	C7	C12	177.9	180.3
C7	C11	C10	C15	181.9	180.0
C7	C11	C12	C13	177.3	180.1
C7	C11	C12	H6	357.2	0.3
C8	N3	C10	C9	177.5	180.1
C10	N3	C8	H5	182.8	179.8
C10	N3	C9	O2	347.3	0.1
C11	C10	N3	C15	181.6	180.2
N3	C10	C15	H14	0.7	0.3
C8	N3	C10	C11	358.0	360.0
C9	N3	C10	C11	180.4	179.9
C7	C11	C10	C12	181.8	179.8
N3	C10	C11	C15	178.5	179.8
C10	C11	C12	C13	359.6	359.8
C10	C11	C12	H6	179.6	180.0
C11	C10	C15	H14	178.9	180.0
C7	C11	C12	C10	177.7	180.3
C12	C11	C10	C15	0.2	0.2
C13	C12	C11	H6	180.0	179.8
C11	C12	C13	H7	181.7	180.0
C15	C10	C11	C12	0.2	0.2
C10	C15	C14	H2	182.4	180.0
C5	N1	C6	C2	182.8	179.9
C6	N1	C5	H3	89.6	85.4
C6	N1	C5	H4	326.6	323.1
N2	C6	N1	O3	175.3	180.0
C5	N1	C2	C6	177.7	180.1
C2	N1	C5	H3	272.1	265.3
C2	N1	C5	H4	149.2	143.0
C4	C3	C2	N1	340.3	337.8
C2	N1	C6	O3	355.5	0.0
C3	C2	N1	C1	233.2	240.6
N1	C2	C3	H9	221.6	219.5
N1	C2	C3	H10	99.0	96.1
C3	C2	N1	H11	113.7	119.4
N1	C2	C1	N5	145.1	161.5
C11	C12	C13	H6	180.0	180.2
C12	C13	C14	H2	177.3	180.0
C13	C14	C15	H2	180.0	179.7
C2	C3	C4	H1	153.4	153.6
C4	C3	C2	H9	118.7	118.3
C4	C3	C2	H10	241.3	241.7
N1	C2	C3	C1	127.0	119.4
N1	C2	C3	H11	245.5	240.6
C3	C2	C1	N5	266.9	279.3
H9	C3	C2	H10	122.6	123.4
C15	C14	C13	H2	180.0	180.3
N1	C2	C1	C3	238.2	242.2
N1	C2	C1	H11	119.9	121.1
C1	C2	C3	H9	94.6	100.1
C1	C2	C3	H10	332.0	336.7
C3	C2	C1	H11	241.7	238.9
O1	C1	C2	N5	181.0	180.0
C2	C1	N5	C16	175.2	174.7
C2	C1	N5	H15	355.2	354.7
N1	C2	C1	O1	326.2	341.5
C3	C2	C1	O1	88.0	99.3
C2	C1	O1	N5	178.9	180.0
O1	C1	N5	C16	354.1	354.8
O1	C1	N5	H15	174.1	174.7
C1	N5	C16	C17	317.2	146.8
C1	N5	C16	C22	140.6	326.5
C16	N5	C1	H15	180.0	180.1
C1	N5	C16	H15	180.0	179.9
C17	C16	N5	C22	176.6	180.3
N5	C16	C17	C18	181.9	180.0
N5	C16	C17	H16	1.9	359.9
N5	C16	C22	C20	178.6	179.8
N5	C16	C22	H19	358.6	0.0
N5	C16	C17	C22	183.5	179.7
C17	C16	N5	H15	137.3	326.8
C17	C16	C22	C20	1.9	359.5
C17	C16	C22	H19	181.9	179.7
C16	C17	C18	C19	0.5	360.0
C18	C17	C16	H16	180.0	180.1
C16	C17	C18	H17	180.5	180.0
N5	C16	C22	C17	176.7	180.3
C22	C16	N5	H15	320.6	146.6
C22	C16	C17	C18	358.4	0.3
C22	C16	C17	H16	178.4	180.2
C18	C17	C16	C22	358.4	0.3
C16	C17	C18	H16	180.0	179.9
C19	C18	C17	H17	180.0	180.0
C17	C18	C19	H18	180.2	180.0
C16	C22	C20	H19	180.0	180.3
C22	C20	C19	H18	180.1	179.8
C19	C18	C17	H16	180.5	180.1
C17	C18	C19	H17	180.0	180.0
C20	C19	C18	H18	180.0	180.0
C16	C22	C20	C19	358.9	0.5
C20	C19	C18	H17	180.2	180.0
C18	C19	C20	H18	180.0	180.0
C16	C22	C20	O4	181.7	180.2
O4	C20	C19	H18	357.3	0.1
C20	O4	C21	F4	304.7	60.0
C20	O4	C21	F2	185.7	180.0
O4	C21	F3	F4	237.3	120.0
F2	C21	F3	F4	117.5	240.0
F3	C21	O4	F4	118.6	240.0
F2	C21	O4	F4	241.0	120.0
O4	C21	F4	F2	242.3	120.0
F3	C21	F2	F4	244.9	120.0
O4	C21	F2	F4	121.2	240.0
C5	C4	H1	C3	112.2	112.2
H1	C4	C3	C2	153.4	153.6
H1	C4	C3	H9	272.1	271.9
H1	C4	C3	H10	34.7	35.2
H3	C5	C4	C3	74.8	81.8
H3	C5	C4	H1	321.3	323.7
H3	C5	N1	C6	89.6	85.4
H3	C5	N1	C2	272.1	265.3
N1	C5	H3	H4	235.8	237.7
H4	C5	C4	C3	197.7	204.1
H4	C5	C4	H1	84.2	86.1
H4	C5	N1	C6	326.6	323.1
H4	C5	N1	C2	149.2	143.0
N1	C5	H4	H3	124.2	122.3
H5	C8	N3	C9	0.3	359.9
H5	C8	N3	C10	182.8	179.8
C11	C12	H6	C13	180.0	179.8
H6	C12	C13	H7	1.7	359.8
H7	C13	C12	H6	1.7	359.8
H7	C13	C14	H2	357.3	359.9
H8	N2	C6	O3	177.0	180.1
C4	C3	H9	C2	247.5	246.5
H9	C3	C4	H1	272.1	271.9
C4	C3	H9	H10	123.8	123.2
H9	C3	C2	C1	94.6	100.1
C2	C3	H9	H10	236.3	236.7
H9	C3	C2	H11	336.1	338.9
C4	C3	H10	C2	112.5	113.5
H10	C3	C4	H1	34.7	35.2
C4	C3	H10	H9	236.3	236.8
H10	C3	C2	C1	332.0	336.7
C2	C3	H10	H9	123.7	123.4
H10	C3	C2	H11	213.5	215.5
N1	C2	H11	C3	112.6	117.8
N1	C2	H11	C1	235.7	238.9
C3	C2	H11	C1	123.1	121.1
H11	C2	C3	H9	336.1	338.9
H11	C2	C3	H10	213.5	215.5
H11	C2	C1	N5	25.2	40.4
H12	N4	C9	O2	0.0	180.0
H13	N4	C9	O2	180.0	360.0
H14	C15	C14	H2	2.4	0.0
C1	N5	H15	C16	180.0	180.1
H15	N5	C16	C17	137.3	326.8
H15	N5	C16	C22	320.6	146.6
H16	C17	C16	C22	178.4	180.2
C16	C17	H16	C18	180.0	180.1
H16	C17	C18	C19	180.5	180.1
H16	C17	C18	H17	0.5	0.0
C17	C18	H17	C19	180.0	180.0
H17	C18	C17	H16	0.5	0.0
H17	C18	C19	H18	0.2	0.0
H18	C19	C18	H17	0.2	0.0
C16	C22	H19	C20	180.0	179.7