PDB Chemical Component 8OT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8OT
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAE |
CAJ |
1.407 |
1.361 |
| CAE |
CAF |
1.412 |
1.399 |
| CAJ |
C5 |
1.447 |
1.400 |
| CAO |
CAN |
1.495 |
1.530 |
| CAO |
CAP |
1.565 |
1.507 |
| NAC |
CAF |
1.352 |
1.394 |
| CAF |
CAG |
1.435 |
1.380 |
| NAD |
CAN |
1.453 |
1.464 |
| NAD |
C4 |
1.375 |
1.379 |
| CAP |
CAV |
1.347 |
1.334 |
| CAP |
SAY |
1.598 |
1.758 |
| CAV |
CAW |
1.355 |
1.384 |
| C5 |
C4 |
1.450 |
1.415 |
| C5 |
C6 |
1.431 |
1.418 |
| C4 |
N3 |
1.389 |
1.325 |
| CAW |
CAX |
1.328 |
1.334 |
| SAY |
CAX |
1.681 |
1.759 |
| CAG |
C6 |
1.436 |
1.400 |
| C6 |
N1 |
1.410 |
1.341 |
| N3 |
C2 |
1.367 |
1.332 |
| N1 |
C2 |
1.364 |
1.320 |
| C2 |
CAM |
1.419 |
1.482 |
| CAM |
CAU |
1.412 |
1.394 |
| CAM |
CAQ |
1.399 |
1.393 |
| CAU |
CAT |
1.404 |
1.380 |
| CAQ |
CAR |
1.398 |
1.380 |
| CAT |
CAS |
1.393 |
1.383 |
| CAR |
CAS |
1.394 |
1.383 |
| CAQ |
H1 |
1.080 |
1.080 |
| CAR |
H2 |
1.080 |
1.081 |
| CAS |
H3 |
1.080 |
1.080 |
| CAT |
H4 |
1.080 |
1.080 |
| CAU |
H5 |
1.080 |
1.081 |
| CAG |
H6 |
1.080 |
1.080 |
| NAC |
H7 |
1.000 |
0.969 |
| NAC |
H8 |
1.000 |
0.970 |
| CAE |
H9 |
1.080 |
1.081 |
| CAJ |
H10 |
1.080 |
1.081 |
| NAD |
H11 |
1.000 |
0.970 |
| CAN |
H12 |
1.100 |
1.090 |
| CAN |
H13 |
1.101 |
1.090 |
| CAO |
H14 |
1.100 |
1.090 |
| CAO |
H15 |
1.100 |
1.090 |
| CAX |
H16 |
1.080 |
1.080 |
| CAW |
H17 |
1.080 |
1.080 |
| CAV |
H18 |
1.080 |
1.079 |
Bond Angles for 8OT
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAJ |
CAE |
H9 |
121.5 |
119.6 |
| CAE |
CAJ |
H10 |
117.8 |
120.1 |
| CAO |
CAN |
H12 |
109.9 |
109.4 |
| CAO |
CAN |
H13 |
109.9 |
109.5 |
| CAO |
CAP |
CAV |
125.2 |
125.2 |
| CAO |
CAP |
SAY |
127.5 |
125.2 |
| CAP |
CAO |
H14 |
109.9 |
109.5 |
| CAP |
CAO |
H15 |
109.9 |
109.5 |
| CAF |
CAG |
H6 |
118.4 |
120.3 |
| CAN |
NAD |
H11 |
106.5 |
120.0 |
| NAD |
CAN |
H12 |
109.9 |
109.5 |
| NAD |
CAN |
H13 |
109.8 |
109.5 |
| SAY |
CAP |
CAV |
107.3 |
109.6 |
| CAP |
CAV |
CAW |
115.7 |
114.9 |
| CAP |
CAV |
H18 |
122.1 |
122.6 |
| CAP |
SAY |
CAX |
96.9 |
91.0 |
| CAV |
CAW |
H17 |
123.6 |
122.5 |
| C5 |
C4 |
N3 |
120.6 |
118.4 |
| C5 |
C6 |
N1 |
119.8 |
118.8 |
| C4 |
N3 |
C2 |
122.4 |
121.4 |
| CAW |
CAX |
H16 |
126.4 |
125.2 |
| SAY |
CAX |
H16 |
126.4 |
125.2 |
| C6 |
N1 |
C2 |
122.6 |
120.4 |
| N1 |
C2 |
N3 |
118.7 |
122.7 |
| N3 |
C2 |
CAM |
119.7 |
118.7 |
| N1 |
C2 |
CAM |
121.5 |
118.7 |
| CAM |
CAU |
H5 |
119.4 |
120.0 |
| CAM |
CAQ |
H1 |
118.7 |
120.1 |
| CAU |
CAT |
H4 |
119.9 |
120.0 |
| CAQ |
CAR |
CAS |
119.6 |
120.1 |
| CAR |
CAQ |
H1 |
118.7 |
120.1 |
| CAQ |
CAR |
H2 |
120.2 |
119.9 |
| CAT |
CAS |
H3 |
120.3 |
119.9 |
| CAS |
CAR |
H2 |
120.2 |
120.0 |
| CAR |
CAS |
H3 |
120.2 |
119.9 |
| H7 |
NAC |
H8 |
109.5 |
120.1 |
| H12 |
CAN |
H13 |
109.5 |
109.5 |
| H14 |
CAO |
H15 |
109.5 |
109.5 |
Torsion Angles for 8OT
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAE |
CAF |
CAG |
H6 |
176.7 |
180.0 |
| CAO |
CAN |
NAD |
H11 |
261.9 |
0.0 |
| NAD |
CAN |
CAO |
H12 |
240.2 |
120.0 |
| NAD |
CAN |
CAO |
H13 |
119.7 |
240.0 |
| H12 |
CAN |
CAO |
H13 |
239.5 |
120.0 |
| CAP |
CAO |
CAN |
H12 |
321.8 |
60.0 |
| CAP |
CAO |
CAN |
H13 |
82.3 |
300.0 |
| SAY |
CAP |
CAO |
CAV |
179.8 |
180.3 |
| CAO |
CAP |
CAV |
CAW |
179.6 |
179.9 |
| CAO |
CAP |
CAV |
H18 |
359.6 |
359.9 |
| CAO |
CAP |
SAY |
CAX |
179.8 |
180.0 |
| H14 |
CAO |
CAP |
H15 |
120.5 |
120.0 |
| NAC |
CAF |
CAG |
H6 |
358.5 |
0.1 |
| CAO |
CAN |
NAD |
H12 |
119.8 |
240.0 |
| CAO |
CAN |
NAD |
H13 |
240.2 |
120.0 |
| H12 |
CAN |
NAD |
H13 |
120.5 |
240.0 |
| CAO |
CAP |
CAV |
SAY |
179.9 |
180.2 |
| CAV |
CAP |
CAO |
H14 |
41.7 |
330.0 |
| CAV |
CAP |
CAO |
H15 |
281.3 |
210.1 |
| CAV |
CAP |
SAY |
CAX |
359.7 |
0.2 |
| CAP |
CAV |
CAW |
H17 |
180.9 |
180.2 |
| CAO |
CAP |
SAY |
CAV |
180.2 |
179.8 |
| SAY |
CAP |
CAO |
H14 |
221.6 |
150.3 |
| SAY |
CAP |
CAO |
H15 |
101.1 |
30.3 |
| SAY |
CAP |
CAV |
CAW |
359.8 |
359.6 |
| SAY |
CAP |
CAV |
H18 |
179.8 |
179.7 |
| CAP |
SAY |
CAX |
H16 |
180.8 |
180.0 |
| CAP |
CAV |
CAW |
H18 |
180.0 |
180.0 |
| CAV |
CAW |
CAX |
H16 |
179.0 |
179.8 |
| C5 |
C4 |
N3 |
C2 |
0.3 |
0.0 |
| C6 |
C5 |
C4 |
N3 |
1.1 |
359.9 |
| C5 |
C6 |
N1 |
C2 |
2.5 |
0.0 |
| N1 |
C2 |
N3 |
C4 |
359.7 |
0.0 |
| C4 |
N3 |
C2 |
CAM |
178.8 |
180.0 |
| CAP |
CAV |
CAW |
CAX |
0.8 |
0.4 |
| SAY |
CAX |
CAW |
H16 |
180.0 |
180.0 |
| CAX |
SAY |
CAP |
CAV |
359.7 |
0.2 |
| CAW |
CAX |
SAY |
H16 |
180.0 |
180.0 |
| C6 |
N1 |
C2 |
N3 |
358.9 |
360.0 |
| C6 |
N1 |
C2 |
CAM |
179.8 |
180.0 |
| N1 |
C2 |
N3 |
CAM |
180.9 |
180.0 |
| C4 |
N3 |
C2 |
N1 |
359.7 |
0.0 |
| N3 |
C2 |
N1 |
CAM |
179.1 |
180.0 |
| N1 |
C2 |
CAM |
N3 |
179.1 |
180.0 |
| C2 |
CAM |
CAU |
H5 |
2.1 |
359.8 |
| C2 |
CAM |
CAQ |
H1 |
358.2 |
0.3 |
| N3 |
C2 |
CAM |
CAU |
356.3 |
180.0 |
| N1 |
C2 |
CAM |
CAU |
175.4 |
0.0 |
| CAU |
CAM |
CAQ |
H1 |
181.4 |
179.7 |
| CAM |
CAU |
CAT |
H4 |
180.5 |
179.8 |
| N3 |
C2 |
CAM |
CAQ |
179.8 |
359.5 |
| N1 |
C2 |
CAM |
CAQ |
358.8 |
179.5 |
| CAR |
CAQ |
CAM |
H1 |
180.0 |
179.7 |
| CAM |
CAQ |
CAR |
H2 |
178.9 |
180.2 |
| CAU |
CAT |
CAS |
H3 |
179.9 |
180.0 |
| CAM |
CAQ |
CAR |
H1 |
180.0 |
180.3 |
| CAS |
CAR |
CAQ |
H2 |
180.0 |
180.0 |
| CAQ |
CAR |
CAS |
H3 |
180.3 |
180.0 |
| CAT |
CAS |
CAR |
H2 |
180.4 |
180.0 |
| CAR |
CAS |
CAT |
H3 |
180.0 |
180.0 |
| CAS |
CAR |
CAQ |
H1 |
178.9 |
180.0 |
| CAQ |
CAR |
CAS |
H2 |
180.0 |
180.0 |
| CAT |
CAS |
CAR |
H3 |
180.0 |
180.0 |
| H1 |
CAQ |
CAR |
CAS |
178.9 |
180.0 |
| H1 |
CAQ |
CAR |
H2 |
358.9 |
360.0 |
| CAQ |
CAR |
H2 |
CAS |
180.0 |
180.0 |
| H2 |
CAR |
CAQ |
H1 |
358.9 |
360.0 |
| H2 |
CAR |
CAS |
H3 |
0.4 |
0.0 |
| H3 |
CAS |
CAR |
H2 |
0.4 |
0.0 |
| H4 |
CAT |
CAS |
H3 |
359.9 |
359.9 |
| H5 |
CAU |
CAT |
H4 |
0.5 |
0.0 |
| H9 |
CAE |
CAJ |
H10 |
358.1 |
360.0 |
| H10 |
CAJ |
CAE |
H9 |
358.1 |
360.0 |
| H11 |
NAD |
CAN |
H12 |
142.1 |
120.0 |
| H11 |
NAD |
CAN |
H13 |
21.7 |
240.0 |
| CAO |
CAN |
H12 |
H13 |
120.7 |
240.0 |
| H12 |
CAN |
NAD |
H11 |
142.1 |
120.0 |
| NAD |
CAN |
H12 |
H13 |
239.3 |
120.0 |
| CAO |
CAN |
H13 |
H12 |
239.3 |
120.0 |
| H13 |
CAN |
NAD |
H11 |
21.7 |
240.0 |
| NAD |
CAN |
H13 |
H12 |
120.7 |
240.0 |
| H14 |
CAO |
CAN |
H12 |
81.6 |
180.0 |
| H14 |
CAO |
CAN |
H13 |
202.1 |
60.0 |
| H14 |
CAO |
CAP |
CAV |
41.7 |
330.0 |
| H14 |
CAO |
CAP |
SAY |
221.6 |
150.3 |
| CAP |
CAO |
H14 |
H15 |
239.3 |
240.0 |
| H15 |
CAO |
CAN |
H12 |
202.1 |
300.0 |
| H15 |
CAO |
CAN |
H13 |
322.5 |
180.0 |
| H15 |
CAO |
CAP |
CAV |
281.3 |
210.1 |
| H15 |
CAO |
CAP |
SAY |
101.1 |
30.3 |
| CAP |
CAO |
H15 |
H14 |
120.7 |
120.0 |
| H17 |
CAW |
CAX |
H16 |
359.0 |
359.9 |
| CAP |
CAV |
H18 |
CAW |
180.0 |
180.0 |
| H18 |
CAV |
CAW |
H17 |
0.9 |
0.2 |