PDB Chemical Component 8OG

Ideal Model

Chemical Description

Name 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
Synonyms 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
Formula C10 H14 N5 O8 P
Formal charge 0
Molecular weight 363.221 g/mol
Component type DNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 38
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3 OP2 HO3'
Bond count 40
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-8-oxoguanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-5-(2-amino-6,8-dioxo-1,7-dihydropurin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=NC2=C(NC(=O)N2[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)C(=O)N1
SMILES (CACTVS) NC1=NC2=C(NC(=O)N2[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)C(=O)N1
Stereo SMILES (OpenEye) C1[C@@H]([C@H](O[C@H]1N2C3=C(C(=O)NC(=N3)N)NC2=O)COP(=O)(O)O)O
InChI descriptor InChI=1S/C10H14N5O8P/c11-9-13-7-6(8(17)14-9)12-10(18)15(7)5-1-3(16)4(23-5)2-22-24(19,20)21/h3-5,16H,1-2H2,(H,12,18)(H2,19,20,21)(H3,11,13,14,17)/t3-,4+,5+/m0/s1
InChIKey descriptor AQIVLFLYHYFRKU-VPENINKCSA-N

Status Information

Last modified 2011-06-04
Created 2000-10-03
Release status REL
Replaces G42
Model PDB code 1FYI
Processing site RCSB