PDB Chemical Component 8O3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8O3
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O18 |
C14 |
1.184 |
1.212 |
| N15 |
C14 |
1.449 |
1.334 |
| N15 |
C16 |
1.448 |
1.456 |
| C14 |
C13 |
1.532 |
1.505 |
| C16 |
C17 |
1.519 |
1.530 |
| C17 |
N11 |
1.456 |
1.472 |
| C13 |
N11 |
1.458 |
1.471 |
| N11 |
C10 |
1.456 |
1.348 |
| C10 |
O12 |
1.186 |
1.212 |
| C10 |
C09 |
1.529 |
1.507 |
| C09 |
C08 |
1.530 |
1.530 |
| C08 |
C07 |
1.531 |
1.530 |
| C08 |
N19 |
1.454 |
1.468 |
| C07 |
C04 |
1.531 |
1.506 |
| C04 |
C05 |
1.388 |
1.382 |
| C04 |
C03 |
1.385 |
1.385 |
| F22 |
C03 |
1.364 |
1.352 |
| C05 |
C06 |
1.386 |
1.384 |
| C03 |
C02 |
1.382 |
1.384 |
| C06 |
F20 |
1.364 |
1.351 |
| C06 |
C01 |
1.384 |
1.386 |
| C02 |
C01 |
1.385 |
1.383 |
| C01 |
F21 |
1.365 |
1.351 |
| C13 |
H132 |
1.099 |
1.090 |
| C13 |
H131 |
1.100 |
1.091 |
| C17 |
H171 |
1.100 |
1.090 |
| C17 |
H172 |
1.100 |
1.090 |
| C02 |
H021 |
1.080 |
1.080 |
| C05 |
H051 |
1.079 |
1.080 |
| C07 |
H071 |
1.100 |
1.090 |
| C07 |
H072 |
1.100 |
1.090 |
| C08 |
H1 |
1.100 |
1.090 |
| C09 |
H092 |
1.100 |
1.090 |
| C09 |
H091 |
1.100 |
1.090 |
| N15 |
H2 |
1.000 |
0.970 |
| C16 |
H161 |
1.100 |
1.090 |
| C16 |
H162 |
1.100 |
1.090 |
| N19 |
H3 |
1.000 |
1.009 |
| N19 |
H4 |
1.000 |
1.009 |
Bond Angles for 8O3
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C16 |
N15 |
H2 |
120.7 |
117.8 |
| N15 |
C16 |
H161 |
109.8 |
109.3 |
| N15 |
C16 |
H162 |
109.8 |
109.2 |
| C14 |
C13 |
H132 |
109.1 |
109.6 |
| C14 |
C13 |
H131 |
109.0 |
109.6 |
| C16 |
C17 |
H171 |
108.3 |
109.7 |
| C16 |
C17 |
H172 |
108.3 |
109.8 |
| C13 |
N11 |
C17 |
121.4 |
117.3 |
| N11 |
C17 |
H171 |
108.3 |
109.7 |
| N11 |
C17 |
H172 |
108.3 |
109.8 |
| N11 |
C13 |
H132 |
109.1 |
109.6 |
| N11 |
C13 |
H131 |
109.1 |
109.5 |
| N11 |
C10 |
O12 |
118.9 |
120.0 |
| C09 |
C10 |
O12 |
119.2 |
120.0 |
| C10 |
C09 |
C08 |
109.4 |
109.5 |
| C10 |
C09 |
H092 |
109.5 |
109.5 |
| C10 |
C09 |
H091 |
109.5 |
109.5 |
| C09 |
C08 |
N19 |
109.7 |
109.5 |
| C09 |
C08 |
H1 |
108.7 |
109.4 |
| C08 |
C07 |
H071 |
109.3 |
109.5 |
| C08 |
C07 |
H072 |
109.3 |
109.5 |
| N19 |
C08 |
H1 |
109.8 |
109.5 |
| C08 |
N19 |
H3 |
109.5 |
111.0 |
| C08 |
N19 |
H4 |
109.5 |
111.0 |
| C04 |
C05 |
C06 |
120.1 |
120.0 |
| C04 |
C05 |
H051 |
120.0 |
120.0 |
| C05 |
C06 |
F20 |
120.2 |
120.0 |
| C06 |
C05 |
H051 |
120.0 |
120.0 |
| C03 |
C02 |
H021 |
119.9 |
120.0 |
| C06 |
C01 |
F21 |
119.9 |
120.0 |
| C02 |
C01 |
F21 |
120.3 |
120.0 |
| H132 |
C13 |
H131 |
109.5 |
109.6 |
| H171 |
C17 |
H172 |
109.5 |
109.7 |
| H071 |
C07 |
H072 |
109.5 |
109.5 |
| H092 |
C09 |
H091 |
109.4 |
109.4 |
| H161 |
C16 |
H162 |
109.5 |
109.1 |
| H3 |
N19 |
H4 |
109.4 |
111.0 |
Torsion Angles for 8O3
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O18 |
C14 |
C13 |
H132 |
271.7 |
47.4 |
| O18 |
C14 |
C13 |
H131 |
31.2 |
287.1 |
| N15 |
C14 |
C13 |
H132 |
92.1 |
227.5 |
| N15 |
C14 |
C13 |
H131 |
211.6 |
107.2 |
| N15 |
C16 |
C17 |
H171 |
65.1 |
287.0 |
| N15 |
C16 |
C17 |
H172 |
183.8 |
166.5 |
| H161 |
C16 |
N15 |
H162 |
239.5 |
119.3 |
| N11 |
C13 |
C14 |
H132 |
239.8 |
119.9 |
| N11 |
C13 |
C14 |
H131 |
120.2 |
240.2 |
| H132 |
C13 |
C14 |
H131 |
240.5 |
120.3 |
| N11 |
C17 |
C16 |
H171 |
239.3 |
119.7 |
| N11 |
C17 |
C16 |
H172 |
120.7 |
240.2 |
| H171 |
C17 |
C16 |
H172 |
241.3 |
120.5 |
| C16 |
C17 |
N11 |
H171 |
120.7 |
240.4 |
| C16 |
C17 |
N11 |
H172 |
239.3 |
119.8 |
| C17 |
N11 |
C13 |
H132 |
252.5 |
162.5 |
| C17 |
N11 |
C13 |
H131 |
133.0 |
282.8 |
| C17 |
N11 |
C10 |
O12 |
0.0 |
360.0 |
| H171 |
C17 |
N11 |
H172 |
118.6 |
239.4 |
| C14 |
C13 |
N11 |
H132 |
120.2 |
240.2 |
| C14 |
C13 |
N11 |
H131 |
239.8 |
119.9 |
| C13 |
N11 |
C17 |
H171 |
268.1 |
58.2 |
| C13 |
N11 |
C17 |
H172 |
149.4 |
178.8 |
| C13 |
N11 |
C10 |
O12 |
180.1 |
180.0 |
| H132 |
C13 |
N11 |
H131 |
119.5 |
239.7 |
| C09 |
C10 |
N11 |
O12 |
179.7 |
179.8 |
| N11 |
C10 |
C09 |
H092 |
300.5 |
300.3 |
| N11 |
C10 |
C09 |
H091 |
60.5 |
60.3 |
| O12 |
C10 |
C09 |
C08 |
0.3 |
0.0 |
| O12 |
C10 |
C09 |
H092 |
120.3 |
120.1 |
| O12 |
C10 |
C09 |
H091 |
240.3 |
240.0 |
| N11 |
C10 |
C09 |
O12 |
180.3 |
180.2 |
| C10 |
C09 |
C08 |
N19 |
191.3 |
295.0 |
| C10 |
C09 |
C08 |
H1 |
311.4 |
55.0 |
| H092 |
C09 |
C10 |
H091 |
240.0 |
240.0 |
| C08 |
C09 |
C10 |
O12 |
0.3 |
0.0 |
| C10 |
C09 |
C08 |
H092 |
120.0 |
120.0 |
| C10 |
C09 |
C08 |
H091 |
240.0 |
240.0 |
| C09 |
C08 |
C07 |
H071 |
295.8 |
65.0 |
| C09 |
C08 |
C07 |
H072 |
55.6 |
305.0 |
| N19 |
C08 |
C09 |
H1 |
240.0 |
240.0 |
| C09 |
C08 |
N19 |
H3 |
180.0 |
176.1 |
| C09 |
C08 |
N19 |
H4 |
300.0 |
300.0 |
| C10 |
C09 |
C08 |
C07 |
70.3 |
175.0 |
| H071 |
C07 |
C08 |
H072 |
240.2 |
120.0 |
| C09 |
C08 |
N19 |
H1 |
119.4 |
120.0 |
| N19 |
C08 |
C07 |
H071 |
174.9 |
305.0 |
| N19 |
C08 |
C07 |
H072 |
294.6 |
185.0 |
| H3 |
N19 |
C08 |
H4 |
240.0 |
236.1 |
| C07 |
C04 |
C05 |
H051 |
359.7 |
0.3 |
| C04 |
C05 |
C06 |
F20 |
179.9 |
180.0 |
| C06 |
C05 |
C04 |
H051 |
180.0 |
179.7 |
| C04 |
C03 |
C02 |
H021 |
180.4 |
180.0 |
| F22 |
C03 |
C02 |
H021 |
0.2 |
0.0 |
| C04 |
C05 |
C06 |
H051 |
180.0 |
180.3 |
| C05 |
C06 |
C01 |
F21 |
180.0 |
179.7 |
| C03 |
C02 |
C01 |
F21 |
179.8 |
180.0 |
| F20 |
C06 |
C05 |
H051 |
359.9 |
359.7 |
| F20 |
C06 |
C01 |
F21 |
360.0 |
0.3 |
| C02 |
C01 |
C06 |
F21 |
180.1 |
179.7 |
| C06 |
C01 |
C02 |
F21 |
179.9 |
180.3 |
| C14 |
C13 |
H132 |
H131 |
119.2 |
239.7 |
| H132 |
C13 |
N11 |
C17 |
252.5 |
162.5 |
| N11 |
C13 |
H132 |
H131 |
240.7 |
120.3 |
| C14 |
C13 |
H131 |
H132 |
240.7 |
120.3 |
| H131 |
C13 |
N11 |
C17 |
133.0 |
282.8 |
| N11 |
C13 |
H131 |
H132 |
119.3 |
239.7 |
| C16 |
C17 |
H171 |
H172 |
118.0 |
239.4 |
| N11 |
C17 |
H171 |
H172 |
242.1 |
120.6 |
| C16 |
C17 |
H172 |
H171 |
242.1 |
120.6 |
| N11 |
C17 |
H172 |
H171 |
117.9 |
239.4 |
| H021 |
C02 |
C01 |
F21 |
359.8 |
360.0 |
| C04 |
C05 |
H051 |
C06 |
180.0 |
179.7 |
| H051 |
C05 |
C06 |
F20 |
359.9 |
359.7 |
| C08 |
C07 |
H071 |
H072 |
119.7 |
240.0 |
| C08 |
C07 |
H072 |
H071 |
240.3 |
120.0 |
| C09 |
C08 |
H1 |
N19 |
240.0 |
240.0 |
| H1 |
C08 |
C07 |
H071 |
54.8 |
184.9 |
| H1 |
C08 |
C07 |
H072 |
174.5 |
64.9 |
| H1 |
C08 |
N19 |
H3 |
60.6 |
56.1 |
| H1 |
C08 |
N19 |
H4 |
180.6 |
180.0 |
| H092 |
C09 |
C10 |
O12 |
120.3 |
120.1 |
| C10 |
C09 |
H092 |
C08 |
240.1 |
240.0 |
| C10 |
C09 |
H092 |
H091 |
120.0 |
120.0 |
| H092 |
C09 |
C08 |
N19 |
71.3 |
175.0 |
| H092 |
C09 |
C08 |
H1 |
191.4 |
295.0 |
| H091 |
C09 |
C10 |
O12 |
240.3 |
240.0 |
| C10 |
C09 |
H091 |
C08 |
119.9 |
120.0 |
| C10 |
C09 |
H091 |
H092 |
240.0 |
240.0 |
| H091 |
C09 |
C08 |
N19 |
311.4 |
55.0 |
| H091 |
C09 |
C08 |
H1 |
71.4 |
175.0 |
| H2 |
N15 |
C16 |
H161 |
341.1 |
37.8 |
| H2 |
N15 |
C16 |
H162 |
101.5 |
278.5 |
| H161 |
C16 |
N15 |
H2 |
341.1 |
37.8 |
| N15 |
C16 |
H161 |
H162 |
120.6 |
240.7 |
| H161 |
C16 |
C17 |
H171 |
305.3 |
47.4 |
| H161 |
C16 |
C17 |
H172 |
64.0 |
286.9 |
| H162 |
C16 |
N15 |
H2 |
101.5 |
278.5 |
| N15 |
C16 |
H162 |
H161 |
239.4 |
119.4 |
| H162 |
C16 |
C17 |
H171 |
184.9 |
166.7 |
| H162 |
C16 |
C17 |
H172 |
303.5 |
46.1 |
| H3 |
N19 |
C08 |
H1 |
60.6 |
56.1 |
| C08 |
N19 |
H3 |
H4 |
120.0 |
123.9 |
| H4 |
N19 |
C08 |
H1 |
180.6 |
180.0 |
| C08 |
N19 |
H4 |
H3 |
240.0 |
236.0 |