PDB Chemical Component 8LX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8LX
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CBB |
OBG |
1.436 |
1.429 |
| OBG |
CAY |
1.368 |
1.360 |
| CAY |
CBA |
1.394 |
1.387 |
| CAY |
CAZ |
1.393 |
1.387 |
| CBA |
CAX |
1.392 |
1.381 |
| CAZ |
CAW |
1.388 |
1.381 |
| CAX |
CAV |
1.390 |
1.387 |
| CAW |
CAV |
1.393 |
1.388 |
| CAV |
OBF |
1.369 |
1.360 |
| OBF |
C4 |
1.367 |
1.356 |
| C4 |
N3 |
1.338 |
1.330 |
| C4 |
C5 |
1.390 |
1.389 |
| N3 |
C2 |
1.406 |
1.318 |
| C5 |
C6 |
1.407 |
1.393 |
| C2 |
N1 |
1.394 |
1.318 |
| C6 |
N1 |
1.337 |
1.332 |
| C6 |
NAA |
1.335 |
1.385 |
| CAR |
NAA |
1.473 |
1.465 |
| NAA |
CAK |
1.483 |
1.465 |
| CAK |
CAM |
1.543 |
1.531 |
| CAM |
OBC |
1.412 |
1.429 |
| OBC |
CAL |
1.363 |
1.359 |
| CAL |
CAN |
1.379 |
1.387 |
| CAL |
CAO |
1.397 |
1.387 |
| CAN |
CAI |
1.383 |
1.382 |
| CAO |
CAJ |
1.396 |
1.381 |
| CAI |
CAG |
1.389 |
1.383 |
| SBH |
CAE |
1.806 |
1.825 |
| SBH |
CAP |
1.685 |
1.773 |
| CAJ |
CAG |
1.395 |
1.383 |
| CAG |
CAF |
1.415 |
1.508 |
| OBE |
CAP |
1.229 |
1.215 |
| CAE |
CAF |
1.553 |
1.530 |
| CAE |
CAH |
1.421 |
1.513 |
| CAP |
NAB |
1.342 |
1.335 |
| NAB |
CAH |
1.348 |
1.322 |
| CAH |
OBD |
1.234 |
1.213 |
| CAE |
H1 |
1.100 |
1.090 |
| CAF |
H2 |
1.100 |
1.089 |
| CAF |
H3 |
1.100 |
1.091 |
| CAI |
H4 |
1.079 |
1.081 |
| CAJ |
H5 |
1.080 |
1.079 |
| CAK |
H6 |
1.100 |
1.090 |
| CAK |
H7 |
1.100 |
1.090 |
| CAM |
H8 |
1.100 |
1.090 |
| CAM |
H9 |
1.100 |
1.090 |
| CAN |
H10 |
1.080 |
1.080 |
| CAO |
H11 |
1.080 |
1.080 |
| CAR |
H12 |
1.100 |
1.090 |
| CAR |
H13 |
1.100 |
1.090 |
| CAR |
H14 |
1.100 |
1.090 |
| CAW |
H15 |
1.080 |
1.080 |
| CAX |
H16 |
1.080 |
1.081 |
| CAZ |
H17 |
1.080 |
1.080 |
| NAB |
H18 |
1.000 |
0.969 |
| CBA |
H19 |
1.080 |
1.080 |
| CBB |
H20 |
1.100 |
1.090 |
| CBB |
H21 |
1.100 |
1.090 |
| CBB |
H22 |
1.100 |
1.090 |
| C2 |
H23 |
1.080 |
1.079 |
| C5 |
H24 |
1.079 |
1.081 |
Bond Angles for 8LX
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OBG |
CBB |
H20 |
109.5 |
109.5 |
| OBG |
CBB |
H21 |
109.5 |
109.4 |
| OBG |
CBB |
H22 |
109.5 |
109.5 |
| CAZ |
CAY |
CBA |
120.2 |
120.0 |
| CAY |
CBA |
H19 |
119.9 |
120.0 |
| CAY |
CAZ |
H17 |
120.3 |
120.0 |
| CBA |
CAX |
H16 |
120.2 |
120.0 |
| CAZ |
CAW |
H15 |
119.7 |
120.0 |
| CAX |
CAV |
OBF |
119.5 |
120.0 |
| CAW |
CAV |
OBF |
120.4 |
120.0 |
| CAV |
OBF |
C4 |
116.4 |
118.0 |
| OBF |
C4 |
N3 |
119.3 |
120.5 |
| OBF |
C4 |
C5 |
119.3 |
120.5 |
| C4 |
C5 |
C6 |
118.9 |
118.3 |
| C4 |
C5 |
H24 |
120.6 |
120.9 |
| N3 |
C2 |
H23 |
120.7 |
119.1 |
| C6 |
C5 |
H24 |
120.6 |
120.8 |
| NAA |
CAR |
H12 |
109.5 |
109.5 |
| NAA |
CAR |
H13 |
109.5 |
109.5 |
| NAA |
CAR |
H14 |
109.5 |
109.4 |
| NAA |
CAK |
H6 |
109.2 |
109.5 |
| NAA |
CAK |
H7 |
109.2 |
109.5 |
| CAK |
CAM |
OBC |
108.4 |
109.4 |
| CAM |
CAK |
H6 |
109.2 |
109.5 |
| CAM |
CAK |
H7 |
109.2 |
109.4 |
| CAK |
CAM |
H8 |
109.7 |
109.4 |
| CAK |
CAM |
H9 |
109.7 |
109.4 |
| OBC |
CAM |
H8 |
109.7 |
109.5 |
| OBC |
CAM |
H9 |
109.7 |
109.5 |
| CAN |
CAL |
CAO |
119.8 |
119.9 |
| CAL |
CAN |
H10 |
119.8 |
120.1 |
| CAL |
CAO |
H11 |
120.1 |
120.1 |
| CAN |
CAI |
H4 |
119.8 |
120.0 |
| CAO |
CAJ |
H5 |
120.0 |
120.0 |
| SBH |
CAE |
H1 |
107.6 |
110.8 |
| CAG |
CAF |
H2 |
108.3 |
109.5 |
| CAG |
CAF |
H3 |
108.4 |
109.5 |
| CAF |
CAE |
CAH |
110.3 |
110.7 |
| CAF |
CAE |
H1 |
110.6 |
110.6 |
| CAE |
CAF |
H2 |
108.4 |
109.5 |
| CAE |
CAF |
H3 |
108.3 |
109.5 |
| CAE |
CAH |
OBD |
122.7 |
123.1 |
| CAH |
CAE |
H1 |
112.5 |
110.7 |
| CAP |
NAB |
H18 |
123.0 |
119.3 |
| NAB |
CAH |
OBD |
119.5 |
123.1 |
| H2 |
CAF |
H3 |
109.5 |
109.5 |
| H6 |
CAK |
H7 |
109.5 |
109.4 |
| H8 |
CAM |
H9 |
109.5 |
109.5 |
| H12 |
CAR |
H13 |
109.5 |
109.5 |
| H12 |
CAR |
H14 |
109.5 |
109.5 |
| H13 |
CAR |
H14 |
109.5 |
109.5 |
| H20 |
CBB |
H21 |
109.5 |
109.5 |
| H20 |
CBB |
H22 |
109.5 |
109.4 |
| H21 |
CBB |
H22 |
109.5 |
109.5 |
Torsion Angles for 8LX
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H20 |
CBB |
OBG |
H21 |
240.0 |
240.0 |
| H20 |
CBB |
OBG |
H22 |
120.0 |
120.0 |
| H21 |
CBB |
OBG |
H22 |
240.0 |
240.0 |
| OBG |
CAY |
CBA |
H19 |
359.8 |
359.8 |
| OBG |
CAY |
CAZ |
H17 |
0.2 |
0.2 |
| CBA |
CAY |
CAZ |
H17 |
179.4 |
180.0 |
| CAY |
CBA |
CAX |
H16 |
180.7 |
180.0 |
| CAZ |
CAY |
CBA |
H19 |
180.6 |
180.0 |
| CAY |
CAZ |
CAW |
H15 |
179.1 |
180.0 |
| CBA |
CAX |
CAV |
OBF |
181.9 |
180.0 |
| CAZ |
CAW |
CAV |
OBF |
178.1 |
180.0 |
| CAW |
CAV |
CAX |
OBF |
175.9 |
179.8 |
| CAX |
CAV |
OBF |
C4 |
289.1 |
250.1 |
| CAX |
CAV |
CAW |
OBF |
184.1 |
180.2 |
| CAW |
CAV |
OBF |
C4 |
113.1 |
70.3 |
| CAV |
OBF |
C4 |
N3 |
331.7 |
5.8 |
| CAV |
OBF |
C4 |
C5 |
152.9 |
185.9 |
| OBF |
C4 |
C5 |
C6 |
179.8 |
180.0 |
| OBF |
C4 |
C5 |
H24 |
359.8 |
359.9 |
| OBF |
C4 |
N3 |
C5 |
181.2 |
180.0 |
| C4 |
N3 |
C2 |
H23 |
180.8 |
180.0 |
| OBF |
C4 |
C5 |
N3 |
178.8 |
180.0 |
| C6 |
C5 |
C4 |
H24 |
180.0 |
180.1 |
| OBF |
C4 |
N3 |
C2 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H24 |
180.0 |
179.9 |
| C6 |
NAA |
CAR |
H12 |
180.0 |
270.0 |
| C6 |
NAA |
CAR |
H13 |
300.0 |
30.0 |
| C6 |
NAA |
CAR |
H14 |
60.0 |
150.0 |
| C6 |
NAA |
CAK |
H6 |
34.0 |
150.0 |
| C6 |
NAA |
CAK |
H7 |
153.7 |
30.0 |
| CAR |
NAA |
CAK |
H6 |
214.6 |
330.0 |
| CAR |
NAA |
CAK |
H7 |
334.2 |
210.0 |
| H12 |
CAR |
NAA |
H13 |
240.0 |
240.0 |
| H12 |
CAR |
NAA |
H14 |
120.0 |
120.0 |
| H13 |
CAR |
NAA |
H14 |
240.0 |
240.0 |
| NAA |
CAK |
CAM |
OBC |
286.4 |
65.0 |
| CAM |
CAK |
NAA |
H6 |
239.8 |
120.0 |
| CAM |
CAK |
NAA |
H7 |
120.2 |
240.0 |
| NAA |
CAK |
CAM |
H8 |
46.2 |
185.0 |
| NAA |
CAK |
CAM |
H9 |
166.5 |
305.0 |
| H6 |
CAK |
NAA |
H7 |
240.3 |
120.0 |
| NAA |
CAK |
CAM |
H6 |
120.1 |
239.9 |
| NAA |
CAK |
CAM |
H7 |
239.8 |
120.0 |
| OBC |
CAM |
CAK |
H8 |
240.2 |
240.0 |
| OBC |
CAM |
CAK |
H9 |
119.9 |
120.0 |
| H6 |
CAK |
CAM |
H7 |
119.7 |
240.1 |
| H8 |
CAM |
CAK |
H9 |
239.7 |
240.0 |
| OBC |
CAM |
CAK |
H6 |
166.2 |
185.0 |
| OBC |
CAM |
CAK |
H7 |
46.6 |
305.0 |
| CAK |
CAM |
OBC |
H8 |
119.8 |
120.0 |
| CAK |
CAM |
OBC |
H9 |
240.1 |
240.1 |
| H8 |
CAM |
OBC |
H9 |
120.3 |
120.1 |
| CAK |
CAM |
OBC |
CAL |
165.9 |
180.0 |
| OBC |
CAL |
CAN |
H10 |
359.7 |
0.3 |
| OBC |
CAL |
CAO |
H11 |
359.8 |
359.7 |
| CAN |
CAL |
CAO |
H11 |
182.0 |
180.0 |
| CAL |
CAN |
CAI |
H4 |
181.3 |
180.0 |
| CAO |
CAL |
CAN |
H10 |
177.6 |
180.0 |
| CAL |
CAO |
CAJ |
H5 |
179.6 |
180.0 |
| CAI |
CAG |
CAF |
H2 |
223.8 |
330.0 |
| CAI |
CAG |
CAF |
H3 |
342.5 |
210.0 |
| CAF |
CAE |
SBH |
H1 |
122.4 |
123.2 |
| SBH |
CAE |
CAF |
H2 |
165.9 |
48.6 |
| SBH |
CAE |
CAF |
H3 |
47.2 |
168.6 |
| CAH |
CAE |
SBH |
H1 |
241.1 |
241.5 |
| CAP |
SBH |
CAE |
H1 |
122.3 |
118.5 |
| SBH |
CAP |
NAB |
H18 |
180.9 |
180.0 |
| CAJ |
CAG |
CAF |
H2 |
43.1 |
149.7 |
| CAJ |
CAG |
CAF |
H3 |
161.8 |
29.7 |
| CAG |
CAF |
CAE |
CAH |
172.3 |
175.0 |
| CAG |
CAF |
CAE |
H1 |
47.2 |
51.8 |
| CAE |
CAF |
CAG |
H2 |
239.3 |
120.0 |
| CAE |
CAF |
CAG |
H3 |
120.7 |
240.0 |
| H2 |
CAF |
CAG |
H3 |
241.3 |
120.0 |
| OBE |
CAP |
NAB |
H18 |
359.7 |
360.0 |
| SBH |
CAE |
CAF |
H1 |
239.3 |
236.7 |
| CAG |
CAF |
CAE |
H2 |
120.6 |
240.0 |
| CAG |
CAF |
CAE |
H3 |
239.3 |
120.0 |
| CAF |
CAE |
CAH |
OBD |
300.4 |
298.4 |
| CAH |
CAE |
CAF |
H1 |
125.1 |
123.2 |
| H2 |
CAF |
CAE |
H3 |
118.7 |
240.0 |
| SBH |
CAE |
CAH |
H1 |
115.4 |
118.5 |
| CAF |
CAE |
CAH |
H1 |
236.1 |
236.9 |
| CAH |
CAE |
CAF |
H2 |
51.6 |
295.0 |
| CAH |
CAE |
CAF |
H3 |
293.0 |
55.0 |
| NAB |
CAH |
CAE |
OBD |
176.6 |
179.9 |
| CAP |
NAB |
CAH |
OBD |
178.8 |
180.0 |
| CAE |
CAH |
NAB |
OBD |
183.3 |
180.1 |
| NAB |
CAH |
CAE |
H1 |
240.9 |
241.5 |
| OBD |
CAH |
CAE |
H1 |
64.3 |
61.5 |
| CAF |
CAE |
H1 |
CAH |
123.8 |
123.2 |
| H1 |
CAE |
CAF |
H2 |
286.6 |
171.8 |
| H1 |
CAE |
CAF |
H3 |
167.9 |
291.9 |
| H1 |
CAE |
CAH |
OBD |
64.3 |
61.5 |
| CAG |
CAF |
H2 |
H3 |
118.0 |
240.0 |
| H2 |
CAF |
CAE |
CAH |
51.6 |
295.0 |
| H2 |
CAF |
CAE |
H1 |
286.6 |
171.8 |
| CAE |
CAF |
H2 |
H3 |
242.0 |
120.0 |
| CAG |
CAF |
H3 |
H2 |
242.1 |
120.0 |
| H3 |
CAF |
CAE |
CAH |
293.0 |
55.0 |
| H3 |
CAF |
CAE |
H1 |
167.9 |
291.9 |
| CAE |
CAF |
H3 |
H2 |
118.0 |
240.0 |
| NAA |
CAK |
H6 |
H7 |
119.5 |
239.9 |
| H6 |
CAK |
CAM |
OBC |
166.2 |
185.0 |
| CAM |
CAK |
H6 |
H7 |
240.5 |
119.9 |
| H6 |
CAK |
CAM |
H8 |
286.0 |
305.1 |
| H6 |
CAK |
CAM |
H9 |
46.4 |
65.0 |
| NAA |
CAK |
H7 |
H6 |
240.5 |
120.1 |
| H7 |
CAK |
CAM |
OBC |
46.6 |
305.0 |
| CAM |
CAK |
H7 |
H6 |
119.5 |
240.1 |
| H7 |
CAK |
CAM |
H8 |
166.4 |
65.0 |
| H7 |
CAK |
CAM |
H9 |
286.7 |
185.0 |
| CAK |
CAM |
H8 |
OBC |
241.0 |
240.0 |
| H8 |
CAM |
CAK |
H6 |
286.0 |
305.1 |
| H8 |
CAM |
CAK |
H7 |
166.4 |
65.0 |
| CAK |
CAM |
H8 |
H9 |
120.5 |
119.9 |
| OBC |
CAM |
H8 |
H9 |
239.5 |
239.9 |
| CAK |
CAM |
H9 |
OBC |
119.1 |
120.0 |
| H9 |
CAM |
CAK |
H6 |
46.4 |
65.0 |
| H9 |
CAM |
CAK |
H7 |
286.7 |
185.0 |
| CAK |
CAM |
H9 |
H8 |
239.5 |
240.1 |
| OBC |
CAM |
H9 |
H8 |
120.5 |
120.1 |
| H10 |
CAN |
CAL |
CAO |
177.6 |
180.0 |
| H10 |
CAN |
CAI |
H4 |
1.2 |
359.7 |
| H11 |
CAO |
CAJ |
H5 |
359.6 |
0.3 |
| NAA |
CAR |
H12 |
H13 |
120.0 |
120.1 |
| NAA |
CAR |
H12 |
H14 |
240.0 |
240.0 |
| H13 |
CAR |
H12 |
H14 |
120.0 |
120.0 |
| NAA |
CAR |
H13 |
H12 |
240.0 |
240.0 |
| NAA |
CAR |
H13 |
H14 |
120.0 |
120.0 |
| H12 |
CAR |
H13 |
H14 |
240.0 |
240.0 |
| NAA |
CAR |
H14 |
H12 |
120.0 |
120.0 |
| NAA |
CAR |
H14 |
H13 |
240.0 |
240.0 |
| H12 |
CAR |
H14 |
H13 |
120.0 |
120.0 |
| H15 |
CAW |
CAV |
OBF |
358.1 |
0.0 |
| H16 |
CAX |
CAV |
OBF |
1.9 |
359.9 |
| H17 |
CAZ |
CAY |
CBA |
179.4 |
180.0 |
| H17 |
CAZ |
CAW |
H15 |
359.2 |
359.7 |
| H18 |
NAB |
CAH |
OBD |
358.8 |
359.9 |
| H19 |
CBA |
CAX |
H16 |
0.8 |
0.3 |
| OBG |
CBB |
H20 |
H21 |
120.0 |
120.0 |
| OBG |
CBB |
H20 |
H22 |
240.0 |
240.0 |
| H21 |
CBB |
H20 |
H22 |
120.0 |
120.0 |
| OBG |
CBB |
H21 |
H20 |
240.0 |
240.0 |
| OBG |
CBB |
H21 |
H22 |
120.0 |
120.0 |
| H20 |
CBB |
H21 |
H22 |
240.0 |
240.0 |
| OBG |
CBB |
H22 |
H20 |
120.0 |
120.0 |
| OBG |
CBB |
H22 |
H21 |
240.0 |
240.0 |
| H20 |
CBB |
H22 |
H21 |
120.0 |
120.0 |
| C4 |
C5 |
H24 |
C6 |
180.0 |
180.1 |