PDB Chemical Component 8HE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8HE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N7 |
C81 |
1.161 |
1.136 |
C81 |
C7 |
1.290 |
1.432 |
C6 |
C7 |
1.395 |
1.397 |
C6 |
C5 |
1.395 |
1.377 |
C7 |
C8 |
1.393 |
1.398 |
C5 |
C4 |
1.390 |
1.396 |
C8 |
C9 |
1.395 |
1.376 |
C4 |
C9 |
1.401 |
1.396 |
C4 |
C1 |
1.497 |
1.482 |
C1 |
C2 |
1.415 |
1.394 |
C1 |
C12 |
1.396 |
1.394 |
C2 |
C3 |
1.415 |
1.380 |
C12 |
C11 |
1.399 |
1.380 |
C3 |
C10 |
1.407 |
1.383 |
C11 |
C10 |
1.404 |
1.384 |
C10 |
S1 |
1.641 |
1.762 |
N3 |
S1 |
1.600 |
1.656 |
O1 |
S1 |
1.459 |
1.421 |
S1 |
O2 |
1.440 |
1.421 |
C2 |
H1 |
1.080 |
1.080 |
C3 |
H2 |
1.080 |
1.080 |
C5 |
H3 |
1.080 |
1.079 |
C6 |
H4 |
1.080 |
1.080 |
C8 |
H5 |
1.080 |
1.081 |
C9 |
H6 |
1.080 |
1.079 |
C11 |
H7 |
1.080 |
1.080 |
C12 |
H8 |
1.080 |
1.080 |
N3 |
H9 |
1.000 |
0.970 |
N3 |
H10 |
1.000 |
0.970 |
Bond Angles for 8HE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C7 |
C8 |
120.6 |
119.9 |
C7 |
C6 |
H4 |
120.0 |
120.0 |
C6 |
C5 |
C4 |
119.9 |
120.0 |
C6 |
C5 |
H3 |
120.1 |
120.0 |
C7 |
C8 |
C9 |
119.3 |
120.0 |
C7 |
C8 |
H5 |
120.3 |
120.0 |
C5 |
C4 |
C9 |
120.0 |
120.1 |
C4 |
C5 |
H3 |
120.0 |
120.0 |
C9 |
C8 |
H5 |
120.4 |
120.0 |
C8 |
C9 |
H6 |
119.9 |
120.0 |
C4 |
C9 |
H6 |
119.9 |
119.9 |
C2 |
C1 |
C12 |
118.2 |
119.7 |
C1 |
C2 |
C3 |
120.1 |
119.8 |
C1 |
C2 |
H1 |
119.9 |
120.0 |
C1 |
C12 |
C11 |
121.2 |
119.9 |
C1 |
C12 |
H8 |
119.4 |
120.0 |
C2 |
C3 |
C10 |
121.5 |
120.2 |
C3 |
C2 |
H1 |
120.0 |
120.1 |
C2 |
C3 |
H2 |
119.2 |
119.9 |
C12 |
C11 |
H7 |
119.2 |
120.0 |
C3 |
C10 |
S1 |
122.5 |
119.9 |
C10 |
C3 |
H2 |
119.3 |
119.9 |
C11 |
C10 |
S1 |
120.1 |
119.9 |
C10 |
S1 |
O2 |
103.9 |
106.4 |
O1 |
S1 |
O2 |
115.2 |
123.2 |
H9 |
N3 |
H10 |
109.5 |
120.1 |
Torsion Angles for 8HE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C81 |
C7 |
C6 |
H4 |
359.8 |
0.0 |
C81 |
C7 |
C8 |
H5 |
359.7 |
359.9 |
C7 |
C6 |
C5 |
C4 |
2.5 |
360.0 |
C7 |
C6 |
C5 |
H3 |
182.5 |
179.8 |
C6 |
C7 |
C8 |
C9 |
359.8 |
0.1 |
C6 |
C7 |
C8 |
H5 |
179.8 |
179.9 |
C6 |
C5 |
C4 |
C9 |
355.9 |
0.0 |
C4 |
C5 |
C6 |
H3 |
180.0 |
180.2 |
C8 |
C7 |
C6 |
H4 |
179.6 |
180.0 |
C9 |
C8 |
C7 |
H5 |
180.0 |
180.1 |
C7 |
C8 |
C9 |
H6 |
178.6 |
180.0 |
C6 |
C5 |
C4 |
H3 |
180.0 |
179.8 |
C5 |
C4 |
C9 |
H6 |
183.6 |
179.9 |
C7 |
C8 |
C9 |
H5 |
180.0 |
179.9 |
C5 |
C4 |
C9 |
C8 |
3.6 |
0.0 |
C4 |
C9 |
C8 |
H6 |
180.0 |
179.9 |
C9 |
C4 |
C5 |
H3 |
175.9 |
180.2 |
C4 |
C9 |
C8 |
H5 |
178.6 |
180.1 |
C8 |
C9 |
C4 |
H6 |
180.0 |
180.1 |
C4 |
C1 |
C2 |
H1 |
2.2 |
359.8 |
C4 |
C1 |
C12 |
H8 |
358.0 |
0.2 |
C2 |
C1 |
C12 |
C11 |
0.3 |
360.0 |
C2 |
C1 |
C12 |
H8 |
180.3 |
180.0 |
C1 |
C2 |
C3 |
C10 |
359.7 |
0.0 |
C3 |
C2 |
C1 |
H1 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
H2 |
179.7 |
180.1 |
C12 |
C1 |
C2 |
C3 |
359.8 |
360.0 |
C12 |
C1 |
C2 |
H1 |
179.9 |
180.0 |
C1 |
C12 |
C11 |
H7 |
180.1 |
180.0 |
C3 |
C2 |
C1 |
C12 |
359.8 |
360.0 |
C1 |
C2 |
C3 |
H1 |
180.0 |
180.0 |
C2 |
C3 |
C10 |
S1 |
178.3 |
180.0 |
C10 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
C1 |
C12 |
C11 |
H8 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
S1 |
181.8 |
180.0 |
C10 |
C3 |
C2 |
H1 |
179.7 |
180.0 |
C2 |
C3 |
C10 |
H2 |
180.0 |
180.0 |
C11 |
C10 |
C3 |
S1 |
182.4 |
180.0 |
C3 |
C10 |
S1 |
O2 |
253.4 |
336.4 |
C1 |
C12 |
C11 |
C10 |
0.1 |
0.1 |
C3 |
C10 |
C11 |
S1 |
177.7 |
180.0 |
C11 |
C10 |
C3 |
H2 |
180.6 |
180.0 |
C11 |
C10 |
S1 |
O2 |
71.0 |
156.4 |
S1 |
C10 |
C3 |
H2 |
358.2 |
360.0 |
O1 |
S1 |
C10 |
O2 |
123.8 |
227.1 |
C10 |
S1 |
O1 |
O2 |
243.1 |
122.9 |
H1 |
C2 |
C1 |
C12 |
179.9 |
180.0 |
C1 |
C2 |
H1 |
C3 |
180.0 |
180.0 |
H1 |
C2 |
C3 |
C10 |
179.7 |
180.0 |
H1 |
C2 |
C3 |
H2 |
359.7 |
0.0 |
C2 |
C3 |
H2 |
C10 |
180.0 |
180.0 |
H2 |
C3 |
C2 |
H1 |
359.7 |
0.0 |
H2 |
C3 |
C10 |
S1 |
358.2 |
360.0 |
C6 |
C5 |
H3 |
C4 |
180.0 |
180.2 |
H3 |
C5 |
C4 |
C9 |
175.9 |
180.2 |
H4 |
C6 |
C7 |
C8 |
179.6 |
180.0 |
H4 |
C6 |
C5 |
C4 |
182.5 |
179.9 |
H4 |
C6 |
C5 |
H3 |
2.5 |
359.7 |
C7 |
C8 |
H5 |
C9 |
180.0 |
180.1 |
H5 |
C8 |
C9 |
H6 |
358.6 |
0.1 |
H6 |
C9 |
C8 |
H5 |
358.6 |
0.1 |
H7 |
C11 |
C10 |
S1 |
1.8 |
360.0 |
C1 |
C12 |
H8 |
C11 |
180.0 |
180.0 |
H8 |
C12 |
C11 |
H7 |
0.1 |
0.0 |