PDB Chemical Component 8E4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 8E4

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C12	O2	1.427	1.429
C12	C11	1.511	1.531
C7	C11	1.531	1.530
C7	C6	1.518	1.530
C7	C8	1.543	1.530
N	C	1.442	1.468
C9	C8	1.516	1.529
C9	C10	1.533	1.530
C6	O1	1.437	1.428
C	C1	1.527	1.530
C1	C2	1.518	1.530
O	C2	1.421	1.429
O1	C5	1.381	1.359
C4	C5	1.404	1.387
C4	C3	1.399	1.382
C2	C3	1.523	1.506
C5	C13	1.384	1.387
C3	C15	1.386	1.382
C13	C14	1.382	1.381
C15	C14	1.386	1.382
C9	H1	1.100	1.090
C9	H2	1.100	1.090
C7	H3	1.099	1.090
C1	H4	1.100	1.090
C1	H5	1.100	1.090
C15	H6	1.080	1.081
O2	H7	0.951	0.968
C12	H8	1.100	1.090
C12	H9	1.100	1.090
C11	H10	1.100	1.091
C11	H11	1.100	1.090
C8	H12	1.100	1.090
C8	H13	1.100	1.090
C10	H14	1.100	1.090
C10	H15	1.100	1.090
C10	H16	1.100	1.091
C6	H17	1.101	1.090
C6	H18	1.100	1.091
C4	H19	1.080	1.081
C13	H20	1.079	1.080
C14	H21	1.080	1.080
C2	H22	1.100	1.091
O	H23	0.950	0.967
C	H24	1.099	1.091
C	H25	1.099	1.089
N	H26	1.000	1.009
N	H27	1.000	1.010

Bond Angles for 8E4

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C12	O2	H7	109.5	114.0
C7	C11	C12	113.1	109.5
C11	C12	H8	108.7	109.4
C11	C12	H9	108.7	109.4
C12	C11	H10	108.6	109.5
C12	C11	H11	108.6	109.4
C11	C7	C6	107.7	109.5
C11	C7	C8	110.5	109.5
C11	C7	H3	107.7	109.4
C7	C11	H10	108.5	109.5
C7	C11	H11	108.6	109.5
C8	C7	C6	115.3	109.5
C7	C6	O1	108.9	109.5
C6	C7	H3	107.8	109.5
C7	C6	H17	109.6	109.5
C7	C6	H18	109.6	109.4
C9	C8	C7	115.5	109.5
C8	C7	H3	107.5	109.5
C7	C8	H12	107.9	109.5
C7	C8	H13	107.9	109.5
N	C	H24	108.3	109.4
N	C	H25	108.3	109.5
C8	C9	C10	113.1	109.5
C8	C9	H1	108.6	109.5
C8	C9	H2	108.6	109.5
C9	C8	H12	108.0	109.4
C9	C8	H13	108.0	109.5
C10	C9	H1	108.5	109.4
C10	C9	H2	108.6	109.4
C9	C10	H14	109.5	109.5
C9	C10	H15	109.5	109.5
C9	C10	H16	109.4	109.5
O1	C6	H17	109.6	109.5
O1	C6	H18	109.6	109.5
C	C1	H4	108.9	109.5
C	C1	H5	108.9	109.5
C1	C2	C3	111.1	109.5
C2	C1	H4	108.9	109.5
C2	C1	H5	108.9	109.5
C1	C2	H22	109.3	109.4
O	C2	H22	110.6	109.4
O1	C5	C13	118.4	120.1
C4	C5	C13	120.3	119.9
C3	C4	H19	119.8	120.0
C5	C13	C14	119.1	119.9
C5	C13	H20	120.4	120.0
C3	C15	H6	119.5	119.9
C15	C14	C13	120.8	120.1
C14	C13	H20	120.4	120.1
C13	C14	H21	119.6	119.9
C14	C15	H6	119.5	120.0
C15	C14	H21	119.5	120.0
H1	C9	H2	109.5	109.4
H4	C1	H5	109.4	109.5
H8	C12	H9	109.4	109.5
H10	C11	H11	109.5	109.4
H12	C8	H13	109.4	109.4
H14	C10	H15	109.5	109.4
H14	C10	H16	109.5	109.4
H15	C10	H16	109.4	109.5
H17	C6	H18	109.5	109.4
H24	C	H25	109.5	109.4
H26	N	H27	109.5	110.9

Torsion Angles for 8E4

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C7	C11	C12	O2	155.6	174.2
C11	C12	O2	H7	180.0	180.0
C12	C11	C7	C6	156.7	65.8
C12	C11	C7	C8	283.5	185.8
C12	C11	C7	H3	40.7	305.8
C7	C11	C12	H10	239.5	120.0
C7	C11	C12	H11	120.5	240.0
H8	C12	C11	H9	119.1	120.0
H10	C11	C12	H11	241.1	119.9
C7	C11	C12	H8	35.1	54.1
C7	C11	C12	H9	276.0	294.1
C12	C11	C7	H10	120.5	240.0
C12	C11	C7	H11	239.5	120.0
C8	C7	C11	C6	126.8	120.0
C11	C7	C6	O1	79.6	294.3
C6	C7	C11	H3	116.0	120.0
C11	C7	C6	H17	199.5	54.4
C11	C7	C6	H18	319.7	174.3
C9	C8	C7	C11	171.1	65.0
C8	C7	C11	H3	242.8	240.0
C11	C7	C8	H12	291.9	305.0
C11	C7	C8	H13	50.2	185.0
H10	C11	C7	H11	118.9	240.0
C6	C7	C11	C12	156.7	65.8
C11	C7	C6	C8	123.9	120.0
C11	C7	C6	H3	244.1	240.0
C6	C7	C11	H10	36.2	185.8
C6	C7	C11	H11	277.3	305.8
C9	C8	C7	C6	293.5	185.0
C8	C7	C6	H3	120.2	120.0
C6	C7	C8	H12	54.3	65.0
C6	C7	C8	H13	172.6	305.0
O1	C6	C7	H17	240.1	240.0
O1	C6	C7	H18	119.9	120.0
H17	C6	C7	H18	239.8	240.1
C8	C7	C11	C12	283.5	185.8
C11	C7	C8	C6	237.6	240.0
C11	C7	C8	H3	117.3	120.0
C8	C7	C11	H10	163.0	305.8
C8	C7	C11	H11	44.0	65.8
C8	C7	C6	O1	315.7	174.3
C6	C7	C8	H3	239.7	240.0
C8	C7	C6	H17	75.6	294.4
C8	C7	C6	H18	195.7	54.3
C7	C8	C9	C10	188.4	180.0
C7	C8	C9	H1	308.9	300.0
C7	C8	C9	H2	67.9	60.0
C9	C8	C7	H12	239.1	120.0
C9	C8	C7	H13	120.9	240.0
H12	C8	C7	H13	241.8	120.0
N	C	C1	H4	62.3	60.0
N	C	C1	H5	181.5	300.0
H24	C	N	H25	241.4	119.9
C11	C7	C8	C9	171.1	65.0
C9	C8	C7	H3	53.8	305.0
C7	C8	C9	H12	120.9	240.0
C7	C8	C9	H13	239.1	120.0
C10	C9	C8	H1	239.5	240.0
C10	C9	C8	H2	120.5	120.0
C8	C9	C10	H14	180.0	300.0
C8	C9	C10	H15	300.0	60.0
C8	C9	C10	H16	60.0	180.1
H1	C9	C8	H2	241.1	240.0
H12	C8	C9	H13	118.2	240.1
C10	C9	C8	C7	188.4	180.0
C8	C9	C10	H1	120.6	120.1
C8	C9	C10	H2	239.5	240.0
C10	C9	C8	H12	67.5	300.0
C10	C9	C8	H13	309.3	60.0
H1	C9	C10	H2	118.9	119.9
H14	C10	C9	H15	240.0	240.0
H14	C10	C9	H16	120.0	120.0
H15	C10	C9	H16	240.0	240.0
O1	C6	C7	H3	195.5	54.3
C7	C6	O1	H17	119.9	120.0
C7	C6	O1	H18	240.1	240.0
C6	O1	C5	C13	181.7	360.0
H17	C6	O1	H18	120.2	120.0
C2	C1	C	H4	239.6	120.0
C2	C1	C	H5	120.4	240.0
C	C1	C2	H22	308.3	305.0
H4	C1	C	H5	240.8	120.0
C	C1	C2	H4	120.4	240.0
C	C1	C2	H5	239.6	120.0
O	C2	C1	H22	118.0	120.0
H4	C1	C2	H5	119.2	240.0
O	C2	C1	H4	306.0	185.0
O	C2	C1	H5	186.7	305.0
C1	C2	O	H22	242.9	240.0
C7	C6	O1	C5	177.8	180.0
C4	C5	O1	C13	181.9	180.3
O1	C5	C13	C14	182.2	180.0
O1	C5	C13	H20	2.2	360.0
O1	C5	C4	C13	178.0	179.7
C4	C5	C13	C14	0.3	359.7
C4	C5	C13	H20	180.3	179.7
C1	C2	C3	C4	319.5	100.0
C3	C4	C5	C13	1.8	360.0
C4	C3	C15	H6	182.4	179.8
C3	C2	C1	H4	67.4	305.0
C3	C2	C1	H5	308.1	65.0
C1	C2	C3	H22	120.6	120.0
C2	C3	C4	H19	0.1	360.0
C2	C3	C15	H6	359.4	0.3
C15	C14	C13	C5	359.0	360.0
C14	C13	C5	H20	180.0	180.0
C5	C13	C14	H21	179.0	180.6
C1	C2	C3	C15	142.6	279.4
C14	C15	C3	H6	180.0	179.4
C3	C15	C14	H21	179.6	180.0
C5	C13	C14	H20	180.0	180.0
C13	C14	C15	H6	179.6	180.0
C15	C14	C13	H21	180.0	179.4
C5	C13	C14	C15	359.0	360.0
C3	C15	C14	H6	180.0	180.6
C15	C14	C13	H20	179.0	180.0
C13	C14	C15	H21	180.0	180.6
H1	C9	C8	C7	308.9	300.0
C8	C9	H1	C10	236.7	240.0
C8	C9	H1	H2	118.4	120.0
H1	C9	C8	H12	188.1	60.0
H1	C9	C8	H13	69.8	180.0
C10	C9	H1	H2	241.7	240.1
H1	C9	C10	H14	59.4	180.0
H1	C9	C10	H15	179.5	300.0
H1	C9	C10	H16	299.4	60.0
H2	C9	C8	C7	67.9	60.0
C8	C9	H2	C10	123.3	120.0
C8	C9	H2	H1	241.6	240.0
H2	C9	C8	H12	307.0	180.0
H2	C9	C8	H13	188.8	300.0
C10	C9	H2	H1	118.3	119.9
H2	C9	C10	H14	300.5	60.0
H2	C9	C10	H15	60.5	180.0
H2	C9	C10	H16	180.5	300.1
H3	C7	C11	C12	40.7	305.8
C11	C7	H3	C6	115.9	120.0
C11	C7	H3	C8	240.9	240.0
H3	C7	C11	H10	280.1	65.8
H3	C7	C11	H11	161.2	185.8
C8	C7	H3	C6	235.1	239.9
H3	C7	C6	O1	195.5	54.3
H3	C7	C6	H17	315.4	174.3
H3	C7	C6	H18	75.6	294.3
H3	C7	C8	H12	174.7	185.0
H3	C7	C8	H13	292.9	65.0
C	C1	H4	H5	118.9	240.0
H4	C1	C2	C3	67.4	305.0
C2	C1	H4	H5	241.1	120.0
H4	C1	C2	H22	187.9	65.0
C	C1	H5	H4	241.1	120.0
H5	C1	C2	C3	308.1	65.0
C2	C1	H5	H4	118.9	240.0
H5	C1	C2	H22	68.7	185.0
H6	C15	C14	C13	179.6	180.0
H6	C15	C14	H21	359.6	359.4
H8	C12	O2	H7	300.5	300.0
C11	C12	H8	H9	241.3	240.0
H8	C12	C11	H10	155.6	294.1
H8	C12	C11	H11	274.6	174.2
H9	C12	O2	H7	59.5	60.1
C11	C12	H9	H8	118.7	120.0
H9	C12	C11	H10	36.5	174.1
H9	C12	C11	H11	155.5	54.1
C7	C11	H10	C12	123.3	240.0
H10	C11	C12	H8	155.6	294.1
H10	C11	C12	H9	36.5	174.1
C12	C11	H10	H11	118.4	240.1
H10	C11	C7	C6	36.2	185.8
H10	C11	C7	C8	163.0	305.8
H10	C11	C7	H3	280.1	65.8
C7	C11	H10	H11	241.7	120.0
C7	C11	H11	C12	236.7	120.0
H11	C11	C12	H8	274.6	174.2
H11	C11	C12	H9	155.5	54.1
C12	C11	H11	H10	241.6	119.9
H11	C11	C7	C6	277.3	305.8
H11	C11	C7	C8	44.0	65.8
H11	C11	C7	H3	161.2	185.8
C7	C11	H11	H10	118.3	240.0
H12	C8	C7	C6	54.3	65.0
C9	C8	H12	C7	125.5	240.0
H12	C8	C7	H3	174.7	185.0
C7	C8	H12	H13	117.2	240.0
H12	C8	C9	C10	67.5	300.0
H12	C8	C9	H1	188.1	60.0
H12	C8	C9	H2	307.0	180.0
C9	C8	H12	H13	242.7	120.0
H13	C8	C7	C6	172.6	305.0
C9	C8	H13	C7	234.5	120.0
H13	C8	C7	H3	292.9	65.0
C7	C8	H13	H12	242.8	120.0
H13	C8	C9	C10	309.3	60.0
H13	C8	C9	H1	69.8	180.0
H13	C8	C9	H2	188.8	300.0
C9	C8	H13	H12	117.3	240.1
H14	C10	C9	H1	59.4	180.0
H14	C10	C9	H2	300.5	60.0
C9	C10	H14	H15	120.0	120.0
C9	C10	H14	H16	240.0	240.0
H15	C10	H14	H16	120.0	119.9
H15	C10	C9	H1	179.5	300.0
H15	C10	C9	H2	60.5	180.0
C9	C10	H15	H14	239.9	240.0
C9	C10	H15	H16	120.0	120.1
H14	C10	H15	H16	240.0	240.1
H16	C10	C9	H1	299.4	60.0
H16	C10	C9	H2	180.5	300.1
C9	C10	H16	H14	120.0	120.0
C9	C10	H16	H15	240.0	239.9
H14	C10	H16	H15	120.0	119.9
C7	C6	H17	O1	240.5	239.9
H17	C6	C7	H3	315.4	174.3
C7	C6	H17	H18	120.2	119.9
O1	C6	H17	H18	239.7	240.0
C7	C6	H18	O1	119.5	120.1
H18	C6	C7	H3	75.6	294.3
C7	C6	H18	H17	239.8	240.0
O1	C6	H18	H17	120.3	120.0
H19	C4	C5	C13	181.7	180.0
C5	C13	H20	C14	180.0	180.0
H20	C13	C14	H21	359.0	0.6
C15	C14	H21	C13	180.0	180.6
H21	C14	C13	H20	359.0	0.6
H21	C14	C15	H6	359.6	359.4
C1	C2	H22	C3	238.3	240.0
H22	C2	C1	H4	187.9	65.0
H22	C2	C1	H5	68.7	185.0
H23	O	C2	H22	297.1	179.9
N	C	H24	H25	117.9	240.0
H24	C	C1	H4	301.6	180.0
H24	C	C1	H5	60.9	60.0
N	C	H25	H24	242.1	119.9
H25	C	C1	H4	183.0	300.0
H25	C	C1	H5	302.2	180.0
H26	N	C	H24	300.7	296.0
H26	N	C	H25	59.3	176.1
H27	N	C	H24	60.7	60.0
H27	N	C	H25	179.4	300.0